RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 PnisrA2AJT4 805 aaKnown RBP29.9■■■□□ 2.38
Shox2-204ENSMUST00000162439 Fchsd2Q3USJ8 740 aa29.9■■■□□ 2.38
Shox2-204ENSMUST00000162439 Rsph6aQ8CDR2 708 aa29.9■■■□□ 2.38
Shox2-204ENSMUST00000162439 PappaQ8R4K8 1624 aa29.89■■■□□ 2.38
Shox2-204ENSMUST00000162439 Ppp1r15aP17564 657 aa29.88■■■□□ 2.37
Shox2-204ENSMUST00000162439 Igsf1Q7TQA1 1317 aa29.88■■■□□ 2.37
Shox2-204ENSMUST00000162439 ClspnQ80YR7 1315 aa29.88■■■□□ 2.37
Shox2-204ENSMUST00000162439 Cald1E9QA15 768 aaKnown RBP29.87■■■□□ 2.37
Shox2-204ENSMUST00000162439 Plekhg5Q66T02 1073 aa29.87■■■□□ 2.37
Shox2-204ENSMUST00000162439 Gm21663A0A0G2JE01 267 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Gm7361D3Z6R1 267 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 5031410I06RikE9Q4E0 267 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Gm1979E9QAN3 267 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Gm5862K7N5V5 267 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Gm10220K7N660 267 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Eif3bQ8JZQ9 803 aaKnown RBP29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Tns2Q8CGB6 1400 aa29.86■■■□□ 2.37
Shox2-204ENSMUST00000162439 Rad23bP54728 416 aa29.85■■■□□ 2.37
Shox2-204ENSMUST00000162439 ErfeQ6PGN1 340 aa29.85■■■□□ 2.37
Shox2-204ENSMUST00000162439 Bicdl1A0JNT9 577 aa29.83■■■□□ 2.37
Shox2-204ENSMUST00000162439 MeiocA2AG06 965 aa29.83■■■□□ 2.37
Shox2-204ENSMUST00000162439 Slc5a1Q8C3K6 665 aa29.82■■■□□ 2.36
Shox2-204ENSMUST00000162439 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.81■■■□□ 2.36
Shox2-204ENSMUST00000162439 Slc12a5Q91V14 1138 aa29.81■■■□□ 2.36
Shox2-204ENSMUST00000162439 Crb1Q8VHS2 1405 aa29.8■■■□□ 2.36
Shox2-204ENSMUST00000162439 Asic4Q7TNS7 539 aa29.8■■■□□ 2.36
Shox2-204ENSMUST00000162439 Ints5Q8CHT3 1018 aa29.8■■■□□ 2.36
Shox2-204ENSMUST00000162439 Phkg2Q9DB30 406 aa29.8■■■□□ 2.36
Shox2-204ENSMUST00000162439 Hdac6Q9Z2V5 1149 aa29.8■■■□□ 2.36
Shox2-204ENSMUST00000162439 Hirip3Q8BLH7 601 aa29.79■■■□□ 2.36
Shox2-204ENSMUST00000162439 Plin1Q8CGN5 517 aa29.79■■■□□ 2.36
Shox2-204ENSMUST00000162439 Jdp2P97875 163 aa29.78■■■□□ 2.36
Shox2-204ENSMUST00000162439 Chrna2Q91X60 512 aa29.78■■■□□ 2.36
Shox2-204ENSMUST00000162439 Zswim8Q3UHH1 1832 aaKnown RBP29.77■■■□□ 2.36
Shox2-204ENSMUST00000162439 Pdzd9Q9D9M4 266 aa29.76■■■□□ 2.35
Shox2-204ENSMUST00000162439 Tjp1P39447 1745 aaKnown RBP29.75■■■□□ 2.35
Shox2-204ENSMUST00000162439 CoblQ5NBX1 1337 aaKnown RBP29.74■■■□□ 2.35
Shox2-204ENSMUST00000162439 Msl1Q6PDM1 616 aa29.74■■■□□ 2.35
Shox2-204ENSMUST00000162439 Mtfr1lQ9CWE0 289 aa29.74■■■□□ 2.35
Shox2-204ENSMUST00000162439 P2rx7Q9Z1M0 595 aa29.74■■■□□ 2.35
Shox2-204ENSMUST00000162439 Prom2Q3UUY6 835 aa29.73■■■□□ 2.35
Shox2-204ENSMUST00000162439 Ssfa2Q922B9 1252 aa29.73■■■□□ 2.35
Shox2-204ENSMUST00000162439 Col23a1Q8K4G2 532 aa29.72■■■□□ 2.35
Shox2-204ENSMUST00000162439 Atg3Q9CPX6 314 aa29.72■■■□□ 2.35
Shox2-204ENSMUST00000162439 Gsdma3Q5Y4Y6 464 aa29.71■■■□□ 2.35
Shox2-204ENSMUST00000162439 NppbP40753 121 aa29.7■■■□□ 2.35
Shox2-204ENSMUST00000162439 Gm13023A2A8N2 498 aa29.68■■■□□ 2.34
Shox2-204ENSMUST00000162439 Mcm10Q0VBD2 885 aa29.68■■■□□ 2.34
Shox2-204ENSMUST00000162439 Sumf1Q8R0F3 372 aa29.68■■■□□ 2.34
Shox2-204ENSMUST00000162439 HypkQ9CR41 129 aa29.68■■■□□ 2.34
Shox2-204ENSMUST00000162439 Ppm1fQ8CGA0 452 aa29.67■■■□□ 2.34
Shox2-204ENSMUST00000162439 Ppef1O35655 650 aa29.66■■■□□ 2.34
Shox2-204ENSMUST00000162439 Zcwpw1Q6IR42 630 aa29.66■■■□□ 2.34
Shox2-204ENSMUST00000162439 Amotl1Q9D4H4 968 aa29.66■■■□□ 2.34
Shox2-204ENSMUST00000162439 Aox2Q5SGK3 1345 aa29.65■■■□□ 2.34
Shox2-204ENSMUST00000162439 Chmp7Q8R1T1 451 aa29.64■■■□□ 2.34
Shox2-204ENSMUST00000162439 Egfem1Q8C088 590 aa29.63■■■□□ 2.33
Shox2-204ENSMUST00000162439 Lrp5Q91VN0 1614 aa29.63■■■□□ 2.33
Shox2-204ENSMUST00000162439 Magea6O89010 325 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Nkx2-3P97334 362 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Magea3Q6T340 320 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Dcaf5Q80T85 946 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Jmjd4Q8BFT6 427 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Sgip1Q8VD37 806 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Cap2Q9CYT6 476 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Usp21Q9QZL6 566 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 TnikP83510 1323 aa29.62■■■□□ 2.33
Shox2-204ENSMUST00000162439 Smarcc1P97496 1104 aa29.61■■■□□ 2.33
Shox2-204ENSMUST00000162439 Miga2Q8BK03 593 aa29.6■■■□□ 2.33
Shox2-204ENSMUST00000162439 PalmQ9Z0P4 383 aa29.6■■■□□ 2.33
Shox2-204ENSMUST00000162439 Sned1Q70E20 1403 aa29.6■■■□□ 2.33
Shox2-204ENSMUST00000162439 Zfp777B9EKF4 885 aa29.59■■■□□ 2.33
Shox2-204ENSMUST00000162439 Msh6P54276 1358 aaKnown RBP29.59■■■□□ 2.33
Shox2-204ENSMUST00000162439 Znrd1-asQ8R0E5 213 aa29.58■■■□□ 2.33
Shox2-204ENSMUST00000162439 Rnf180Q3U827 592 aa29.56■■■□□ 2.32
Shox2-204ENSMUST00000162439 Spata31d1bE9QA57 1361 aa29.55■■■□□ 2.32
Shox2-204ENSMUST00000162439 Ubr3Q5U430 1889 aa29.55■■■□□ 2.32
Shox2-204ENSMUST00000162439 Ccdc155Q80VJ8 648 aa29.54■■■□□ 2.32
Shox2-204ENSMUST00000162439 Mrps5Q99N87 432 aaKnown RBP29.53■■■□□ 2.32
Shox2-204ENSMUST00000162439 Sos1Q62245 1319 aa29.52■■■□□ 2.32
Shox2-204ENSMUST00000162439 Igf2rQ07113 2483 aaKnown RBP29.52■■■□□ 2.32
Shox2-204ENSMUST00000162439 Las1lA2BE28 776 aaKnown RBP29.51■■■□□ 2.31
Shox2-204ENSMUST00000162439 Ppp2r1aQ76MZ3 589 aa29.5■■■□□ 2.31
Shox2-204ENSMUST00000162439 CpzQ8R4V4 654 aa29.5■■■□□ 2.31
Shox2-204ENSMUST00000162439 Smg7Q5RJH6 1138 aaKnown RBP29.48■■■□□ 2.31
Shox2-204ENSMUST00000162439 Slc34a2Q9DBP0 697 aa29.48■■■□□ 2.31
Shox2-204ENSMUST00000162439 Snap23O09044 210 aa29.47■■■□□ 2.31
Shox2-204ENSMUST00000162439 C4bP01029 1738 aa29.47■■■□□ 2.31
Shox2-204ENSMUST00000162439 Spef2Q8C9J3 1734 aa29.47■■■□□ 2.31
Shox2-204ENSMUST00000162439 Col11a2Q64739 1736 aa29.46■■■□□ 2.31
Shox2-204ENSMUST00000162439 Kiaa1107Q80TK0 1369 aa29.46■■■□□ 2.31
Shox2-204ENSMUST00000162439 Plch1Q4KWH5 1682 aa29.46■■■□□ 2.31
Shox2-204ENSMUST00000162439 Ubr2Q6WKZ8 1755 aa29.46■■■□□ 2.31
Shox2-204ENSMUST00000162439 Yy1Q00899 414 aa29.45■■■□□ 2.31
Shox2-204ENSMUST00000162439 Rab11fip3Q8CHD8 1047 aa29.45■■■□□ 2.31
Shox2-204ENSMUST00000162439 RtcbQ99LF4 505 aaKnown RBP29.44■■■□□ 2.3
Shox2-204ENSMUST00000162439 Tlr8P58682 1032 aa29.43■■■□□ 2.3
Shox2-204ENSMUST00000162439 TmpoQ61033 693 aaKnown RBP29.43■■■□□ 2.3
Shox2-204ENSMUST00000162439 Rapgefl1Q68EF8 662 aa29.43■■■□□ 2.3
Shox2-204ENSMUST00000162439 Tsen2Q6P7W5 460 aa29.43■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 454.9 ms