RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Gm35339A0A140LHH9 1649 aa51.27■■■■■ 5.8
Shox2-204ENSMUST00000162439 NischQ80TM9 1593 aa50.43■■■■■ 5.66
Shox2-204ENSMUST00000162439 Abcc8B2RUS7 1588 aa48.93■■■■■ 5.42
Shox2-204ENSMUST00000162439 Abcc9P70170 1546 aa48.71■■■■■ 5.39
Shox2-204ENSMUST00000162439 ScribQ80U72 1612 aa47.52■■■■■ 5.2
Shox2-204ENSMUST00000162439 NacadQ5SWP3 1504 aa45.87■■■■■ 4.93
Shox2-204ENSMUST00000162439 Kdm5dQ62240 1548 aa45.78■■■■■ 4.92
Shox2-204ENSMUST00000162439 Sycp2Q9CUU3 1500 aa45.04■■■■■ 4.8
Shox2-204ENSMUST00000162439 Dcaf1Q80TR8 1506 aa44.8■■■■■ 4.76
Shox2-204ENSMUST00000162439 BicraF8VPZ9 1578 aa44.56■■■■■ 4.72
Shox2-204ENSMUST00000162439 Dnajc5bQ9CQ94 199 aa44.26■■■■■ 4.68
Shox2-204ENSMUST00000162439 Rb1cc1Q9ESK9 1588 aa43.89■■■■■ 4.62
Shox2-204ENSMUST00000162439 Pds5bQ4VA53 1446 aaKnown RBP43.31■■■■■ 4.52
Shox2-204ENSMUST00000162439 Baz1aO88379 1555 aa43.21■■■■■ 4.51
Shox2-204ENSMUST00000162439 Thoc2B1AZI6 1594 aaKnown RBP43.17■■■■■ 4.5
Shox2-204ENSMUST00000162439 Rhox8Q6VSS7 320 aa43.13■■■■■ 4.49
Shox2-204ENSMUST00000162439 Crybg2B7ZCC2 1516 aa43.12■■■■■ 4.49
Shox2-204ENSMUST00000162439 Ccdc180J3QNE4 1664 aa43.04■■■■■ 4.48
Shox2-204ENSMUST00000162439 Atad2bE9Q166 1460 aaKnown RBP42.83■■■■■ 4.45
Shox2-204ENSMUST00000162439 Zcchc6Q5BLK4 1491 aaKnown RBP42.72■■■■■ 4.43
Shox2-204ENSMUST00000162439 Cc2d2aQ8CFW7 1633 aa42.49■■■■■ 4.39
Shox2-204ENSMUST00000162439 Ercc6F8VPZ5 1481 aa42.35■■■■■ 4.37
Shox2-204ENSMUST00000162439 Smarca2Q6DIC0 1577 aa42.31■■■■■ 4.36
Shox2-204ENSMUST00000162439 Smarca4Q3TKT4 1613 aaKnown RBP42.25■■■■■ 4.35
Shox2-204ENSMUST00000162439 Cecr2E9Q2Z1 1453 aa42.13■■■■■ 4.34
Shox2-204ENSMUST00000162439 Iqgap2Q3UQ44 1575 aa42.12■■■■■ 4.33
Shox2-204ENSMUST00000162439 Fam135aQ6NS59 1506 aa42.05■■■■■ 4.32
Shox2-204ENSMUST00000162439 Frmpd1A2AKB4 1549 aa41.85■■■■■ 4.29
Shox2-204ENSMUST00000162439 Wdr62Q3U3T8 1523 aa41.84■■■■■ 4.29
Shox2-204ENSMUST00000162439 Phldb1Q6PDH0 1371 aaKnown RBP41.69■■■■■ 4.26
Shox2-204ENSMUST00000162439 Ubl4bQ9CQ84 188 aa41.42■■■■■ 4.22
Shox2-204ENSMUST00000162439 Baz1bQ9Z277 1479 aa41.41■■■■■ 4.22
Shox2-204ENSMUST00000162439 Unc13aQ4KUS2 1712 aa41.25■■■■■ 4.19
Shox2-204ENSMUST00000162439 Mrc2Q64449 1479 aa41.09■■■■■ 4.17
Shox2-204ENSMUST00000162439 CftrP26361 1476 aa40.99■■■■■ 4.15
Shox2-204ENSMUST00000162439 Cttnbp2B9EJA2 1648 aa40.88■■■■■ 4.13
Shox2-204ENSMUST00000162439 Synj1Q8CHC4 1574 aa40.86■■■■■ 4.13
Shox2-204ENSMUST00000162439 Rtl1Q7M732 1744 aa40.7■■■■■ 4.11
Shox2-204ENSMUST00000162439 Brd4Q9ESU6 1400 aaKnown RBP40.67■■■■■ 4.1
Shox2-204ENSMUST00000162439 Ccdc136Q3TVA9 1136 aa40.55■■■■■ 4.08
Shox2-204ENSMUST00000162439 Dnajc5P60904 198 aa40.44■■■■■ 4.06
Shox2-204ENSMUST00000162439 Trim41Q5NCC3 630 aa40.42■■■■■ 4.06
Shox2-204ENSMUST00000162439 Cux2P70298 1426 aa40.26■■■■■ 4.04
Shox2-204ENSMUST00000162439 Lrriq1Q0P5X1 1673 aa40.26■■■■■ 4.04
Shox2-204ENSMUST00000162439 Esf1Q3V1V3 845 aaKnown RBP40.25■■■■■ 4.03
Shox2-204ENSMUST00000162439 Kif15Q6P9L6 1387 aa40.16■■■■■ 4.02
Shox2-204ENSMUST00000162439 Rsf1E9PWW9 1441 aaKnown RBP40.15■■■■■ 4.02
Shox2-204ENSMUST00000162439 Kif21aQ9QXL2 1672 aa40.05■■■■■ 4
Shox2-204ENSMUST00000162439 Lamc3Q9R0B6 1581 aa39.89■■■■□ 3.98
Shox2-204ENSMUST00000162439 Npm1Q61937 292 aaKnown RBP39.8■■■■□ 3.96
Shox2-204ENSMUST00000162439 Eif4g3Q80XI3 1579 aaKnown RBP39.63■■■■□ 3.93
Shox2-204ENSMUST00000162439 Cep164Q5DU05 1446 aa39.57■■■■□ 3.92
Shox2-204ENSMUST00000162439 Shroom2A2ALU4 1481 aa39.45■■■■□ 3.91
Shox2-204ENSMUST00000162439 Urb2E9Q7L1 1524 aaKnown RBP39.44■■■■□ 3.9
Shox2-204ENSMUST00000162439 Dhx29Q6PGC1 1365 aaKnown RBP39.37■■■■□ 3.89
Shox2-204ENSMUST00000162439 Plb1Q3TTY0 1478 aa39.36■■■■□ 3.89
Shox2-204ENSMUST00000162439 Il27Q8K3I6 234 aa39.35■■■■□ 3.89
Shox2-204ENSMUST00000162439 TnnQ80Z71 1560 aa39.26■■■■□ 3.88
Shox2-204ENSMUST00000162439 Ccdc18Q640L5 1455 aa39.25■■■■□ 3.87
Shox2-204ENSMUST00000162439 LrpprcQ6PB66 1392 aaKnown RBP39.21■■■■□ 3.87
Shox2-204ENSMUST00000162439 Top2bQ64511 1612 aa39.13■■■■□ 3.85
Shox2-204ENSMUST00000162439 Crocc2F6XLV1 1638 aa39.11■■■■□ 3.85
Shox2-204ENSMUST00000162439 Camsap1A2AHC3 1581 aa39.1■■■■□ 3.85
Shox2-204ENSMUST00000162439 Golga3P55937 1487 aa39.1■■■■□ 3.85
Shox2-204ENSMUST00000162439 Col17a1Q07563 1470 aa39.07■■■■□ 3.85
Shox2-204ENSMUST00000162439 Pabpn1Q8CCS6 302 aaKnown RBP39.04■■■■□ 3.84
Shox2-204ENSMUST00000162439 Cngb1E1AZ71 1325 aa39■■■■□ 3.83
Shox2-204ENSMUST00000162439 PogzQ8BZH4 1409 aaKnown RBP38.92■■■■□ 3.82
Shox2-204ENSMUST00000162439 Ift140E9PY46 1464 aa38.9■■■■□ 3.82
Shox2-204ENSMUST00000162439 Rusc2Q80U22 1514 aa38.86■■■■□ 3.81
Shox2-204ENSMUST00000162439 Duox2A2AQ99 1517 aa38.75■■■■□ 3.79
Shox2-204ENSMUST00000162439 Pelp1Q9DBD5 1123 aaKnown RBP38.75■■■■□ 3.79
Shox2-204ENSMUST00000162439 Fmn1Q05860 1466 aa38.73■■■■□ 3.79
Shox2-204ENSMUST00000162439 Disp1Q3TDN0 1521 aa38.64■■■■□ 3.78
Shox2-204ENSMUST00000162439 Grin2bQ01097 1482 aa38.54■■■■□ 3.76
Shox2-204ENSMUST00000162439 Setd1bQ8CFT2 1985 aa38.5■■■■□ 3.75
Shox2-204ENSMUST00000162439 Zcchc11B2RX14 1644 aaKnown RBP38.45■■■■□ 3.75
Shox2-204ENSMUST00000162439 Nup160Q9Z0W3 1402 aaKnown RBP38.43■■■■□ 3.74
Shox2-204ENSMUST00000162439 Samd9lQ69Z37 1561 aa38.42■■■■□ 3.74
Shox2-204ENSMUST00000162439 Cc2d2bA0A286YDU8 1405 aa38.37■■■■□ 3.73
Shox2-204ENSMUST00000162439 Efcab5A0JP43 1406 aa38.32■■■■□ 3.73
Shox2-204ENSMUST00000162439 Pbrm1Q8BSQ9 1634 aaKnown RBP38.3■■■■□ 3.72
Shox2-204ENSMUST00000162439 Rad54l2Q99NG0 1466 aa38.24■■■■□ 3.71
Shox2-204ENSMUST00000162439 Grin2aP35436 1464 aa38.11■■■■□ 3.69
Shox2-204ENSMUST00000162439 Magi3Q9EQJ9 1476 aa38.11■■■■□ 3.69
Shox2-204ENSMUST00000162439 AqrQ8CFQ3 1481 aaKnown RBP38.08■■■■□ 3.69
Shox2-204ENSMUST00000162439 Fgd6Q69ZL1 1399 aa38.07■■■■□ 3.69
Shox2-204ENSMUST00000162439 Adgrl3Q80TS3 1537 aa38.06■■■■□ 3.68
Shox2-204ENSMUST00000162439 PtprkP35822 1457 aa38.02■■■■□ 3.68
Shox2-204ENSMUST00000162439 Ccdc88bQ4QRL3 1481 aa38.02■■■■□ 3.68
Shox2-204ENSMUST00000162439 Pcdh10E9PXQ7 1057 aa38■■■■□ 3.67
Shox2-204ENSMUST00000162439 NrkQ9R0G8 1455 aa37.96■■■■□ 3.67
Shox2-204ENSMUST00000162439 Gm156Q58A37 223 aa37.96■■■■□ 3.67
Shox2-204ENSMUST00000162439 Cep170Q6A065 1588 aa37.95■■■■□ 3.67
Shox2-204ENSMUST00000162439 Gapvd1Q6PAR5 1458 aa37.95■■■■□ 3.67
Shox2-204ENSMUST00000162439 Arhgef5E9Q7D5 1581 aa37.92■■■■□ 3.66
Shox2-204ENSMUST00000162439 Top2aQ01320 1528 aaKnown RBP37.89■■■■□ 3.66
Shox2-204ENSMUST00000162439 Ttbk1Q6PCN3 1308 aa37.83■■■■□ 3.65
Shox2-204ENSMUST00000162439 Pla2r1Q62028 1487 aa37.82■■■■□ 3.64
Shox2-204ENSMUST00000162439 AknaQ80VW7 1404 aa37.8■■■■□ 3.64
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms