Protein–RNA interactions for Protein: Q6WKZ8

Ubr2, E3 ubiquitin-protein ligase UBR2, mousemouse

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2Q6WKZ8 Gm25239-201ENSMUST00000174915 86 ntBASIC50.26■■■■■ 5.64
Ubr2Q6WKZ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC46.68■■■■■ 5.06
Ubr2Q6WKZ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC45.62■■■■■ 4.89
Ubr2Q6WKZ8 Gm15042-201ENSMUST00000120212 883 ntBASIC43.87■■■■■ 4.61
Ubr2Q6WKZ8 Gm24109-201ENSMUST00000175489 103 ntBASIC43.83■■■■■ 4.61
Ubr2Q6WKZ8 Gm15045-201ENSMUST00000117359 883 ntBASIC43.16■■■■■ 4.5
Ubr2Q6WKZ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.4
Ubr2Q6WKZ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42.5■■■■■ 4.39
Ubr2Q6WKZ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42.46■■■■■ 4.39
Ubr2Q6WKZ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41.96■■■■■ 4.31
Ubr2Q6WKZ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
Ubr2Q6WKZ8 Gm23366-201ENSMUST00000175022 89 ntBASIC41.87■■■■■ 4.29
Ubr2Q6WKZ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.7■■■■■ 4.27
Ubr2Q6WKZ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.06■■■■■ 4.16
Ubr2Q6WKZ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Ubr2Q6WKZ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC40.71■■■■■ 4.11
Ubr2Q6WKZ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40.43■■■■■ 4.06
Ubr2Q6WKZ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
Ubr2Q6WKZ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC40.3■■■■■ 4.04
Ubr2Q6WKZ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40.24■■■■■ 4.03
Ubr2Q6WKZ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC40.24■■■■■ 4.03
Ubr2Q6WKZ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC40.15■■■■■ 4.02
Ubr2Q6WKZ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
Ubr2Q6WKZ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Ubr2Q6WKZ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Ubr2Q6WKZ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
Ubr2Q6WKZ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC39.78■■■■□ 3.96
Ubr2Q6WKZ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC39.76■■■■□ 3.95
Ubr2Q6WKZ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Ubr2Q6WKZ8 Gm25238-201ENSMUST00000174914 89 ntBASIC39.7■■■■□ 3.95
Ubr2Q6WKZ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC39.64■■■■□ 3.94
Ubr2Q6WKZ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC39.6■■■■□ 3.93
Ubr2Q6WKZ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Ubr2Q6WKZ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
Ubr2Q6WKZ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.24■■■■□ 3.87
Ubr2Q6WKZ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.12■■■■□ 3.85
Ubr2Q6WKZ8 Psd-208ENSMUST00000224556 2034 ntBASIC39.02■■■■□ 3.84
Ubr2Q6WKZ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC38.99■■■■□ 3.83
Ubr2Q6WKZ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC38.73■■■■□ 3.79
Ubr2Q6WKZ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
Ubr2Q6WKZ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38.66■■■■□ 3.78
Ubr2Q6WKZ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Ubr2Q6WKZ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.42■■■■□ 3.74
Ubr2Q6WKZ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38.42■■■■□ 3.74
Ubr2Q6WKZ8 Gm27325-201ENSMUST00000175467 74 ntBASIC38.42■■■■□ 3.74
Ubr2Q6WKZ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Ubr2Q6WKZ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.17■■■■□ 3.7
Ubr2Q6WKZ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38.07■■■■□ 3.68
Ubr2Q6WKZ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.04■■■■□ 3.68
Ubr2Q6WKZ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Ubr2Q6WKZ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Ubr2Q6WKZ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.86■■■■□ 3.65
Ubr2Q6WKZ8 Gm25262-201ENSMUST00000174934 133 ntBASIC37.85■■■■□ 3.65
Ubr2Q6WKZ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
Ubr2Q6WKZ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC37.75■■■■□ 3.63
Ubr2Q6WKZ8 Rab21-202ENSMUST00000218831 843 ntBASIC37.73■■■■□ 3.63
Ubr2Q6WKZ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC37.7■■■■□ 3.63
Ubr2Q6WKZ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Ubr2Q6WKZ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Ubr2Q6WKZ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37.55■■■■□ 3.6
Ubr2Q6WKZ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC37.46■■■■□ 3.59
Ubr2Q6WKZ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Ubr2Q6WKZ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Ubr2Q6WKZ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37.43■■■■□ 3.58
Ubr2Q6WKZ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
Ubr2Q6WKZ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Ubr2Q6WKZ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC37.37■■■■□ 3.57
Ubr2Q6WKZ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37.36■■■■□ 3.57
Ubr2Q6WKZ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
Ubr2Q6WKZ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC37.34■■■■□ 3.57
Ubr2Q6WKZ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC37.32■■■■□ 3.57
Ubr2Q6WKZ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37.14■■■■□ 3.54
Ubr2Q6WKZ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.12■■■■□ 3.53
Ubr2Q6WKZ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Ubr2Q6WKZ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
Ubr2Q6WKZ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Ubr2Q6WKZ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
Ubr2Q6WKZ8 Gm26115-201ENSMUST00000175605 87 ntBASIC36.99■■■■□ 3.51
Ubr2Q6WKZ8 Gm8109-201ENSMUST00000194076 746 ntBASIC36.99■■■■□ 3.51
Ubr2Q6WKZ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Ubr2Q6WKZ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Ubr2Q6WKZ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
Ubr2Q6WKZ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Ubr2Q6WKZ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC36.83■■■■□ 3.49
Ubr2Q6WKZ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC36.81■■■■□ 3.48
Ubr2Q6WKZ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.81■■■■□ 3.48
Ubr2Q6WKZ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36.8■■■■□ 3.48
Ubr2Q6WKZ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Ubr2Q6WKZ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
Ubr2Q6WKZ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Ubr2Q6WKZ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36.7■■■■□ 3.47
Ubr2Q6WKZ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36.67■■■■□ 3.46
Ubr2Q6WKZ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC36.6■■■■□ 3.45
Ubr2Q6WKZ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.57■■■■□ 3.44
Ubr2Q6WKZ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
Ubr2Q6WKZ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC36.56■■■■□ 3.44
Ubr2Q6WKZ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
Ubr2Q6WKZ8 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.54■■■■□ 3.44
Ubr2Q6WKZ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Ubr2Q6WKZ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms