RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 CenppQ9CZ92 286 aa17.78■□□□□ 0.44
Clcnka-201ENSMUST00000042617 PtmsQ9D0J8 101 aaKnown RBP17.78■□□□□ 0.44
Clcnka-201ENSMUST00000042617 Cps1Q8C196 1500 aa17.78■□□□□ 0.44
Clcnka-201ENSMUST00000042617 CarsQ9ER72 831 aaKnown RBP17.78■□□□□ 0.44
Clcnka-201ENSMUST00000042617 Gm9992B2RWK3 458 aa17.77■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Pank2Q3U4S0 443 aa17.77■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Q3UPC7 1272 aa17.77■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Unc93aQ710D3 458 aa17.77■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Ankrd44B2RXR6 993 aa17.76■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Senp3Q9EP97 568 aaKnown RBP17.76■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Arap3Q8R5G7 1538 aa17.75■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Ppip5k2Q6ZQB6 1129 aa17.75■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Kdm4aQ8BW72 1064 aa17.75■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Nsd3Q6P2L6 1439 aa17.75■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Mindy4Q3UQI9 744 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Atp7bQ64446 1462 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Ltbp4Q8K4G1 1666 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 NcapgE9PWG6 1004 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Trim27Q62158 513 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Plekhm2Q80TQ5 1018 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Aldh8a1Q8BH00 487 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Rps6ka5Q8C050 863 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Rcan3Q9JKK0 239 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Med1Q925J9 1575 aa17.74■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Zscan25B2RX31 543 aa17.73■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Dhx30Q99PU8 1217 aaKnown RBP17.73■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Map3k19E9Q3S4 1311 aa17.73■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Thsd7aQ69ZU6 1645 aa17.73■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Tnnt2P50752 301 aa17.73■□□□□ 0.43
Clcnka-201ENSMUST00000042617 IbspQ61711 324 aa17.72■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Znf316Q6PGE4 1016 aa17.72■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Gys2Q8VCB3 704 aa17.72■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Wdr78E9PYY5 807 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Ccdc146E9Q9F7 977 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Zdhhc9P59268 364 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Elp1Q7TT37 1333 aaKnown RBP17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Pik3c2bE9QAN8 1632 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Nectin2P32507 530 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Tmco5bQ80X59 307 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Swt1Q9DBQ9 907 aa17.71■□□□□ 0.43
Clcnka-201ENSMUST00000042617 Ppp6r3Q922D4 844 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Cyp27a1Q9DBG1 533 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Tmem94Q7TSH8 1360 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Lmtk3Q5XJV6 1424 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Nrxn3Q6P9K9 1571 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Glipr1l2Q9CQ35 332 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Gcc1Q9D4H2 778 aa17.7■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Nucb1Q02819 459 aaKnown RBP17.69■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Syce3B5KM66 88 aa17.69■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Mcm2P97310 904 aa17.69■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Q3UJC8 639 aa17.69■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Eif4g2Q62448 906 aaKnown RBP17.69■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Vamp4O70480 141 aa17.68■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Anp32cQ64G17 123 aa17.68■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Fchsd2Q3USJ8 740 aa17.68■□□□□ 0.42
Clcnka-201ENSMUST00000042617 HnrnpuQ8VEK3 800 aaKnown RBP17.68■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Ccdc94Q9D6J3 314 aa17.68■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Gripap1Q8VD04 806 aa17.67■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Kif4P33174 1231 aa17.67■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Tbc1d31Q6NXY1 996 aa17.67■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Kif20bQ80WE4 1774 aaKnown RBP17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Rreb1Q3UH06 1700 aaKnown RBP17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Pdia3P27773 505 aaKnown RBP17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Q4VA45 678 aa17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Stk11ipQ3TAA7 1072 aa17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Rbm27Q5SFM8 1060 aaKnown RBP17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Fbxo2Q80UW2 297 aa17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Rapgef3Q8VCC8 918 aa17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Slc12a5Q91V14 1138 aa17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Cdc37l1Q9CZP7 335 aa17.66■□□□□ 0.42
Clcnka-201ENSMUST00000042617 E4f1Q8CCE9 783 aa17.65■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Kif3aP28741 701 aa17.64■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Idi2Q8BFZ6 227 aa17.64■□□□□ 0.42
Clcnka-201ENSMUST00000042617 Tns3Q5SSZ5 1440 aa17.64■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Mrps27Q8BK72 415 aaKnown RBP17.64■□□□□ 0.41
Clcnka-201ENSMUST00000042617 D430041D05RikF6ZGR6 1678 aa17.64■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Gm10563F6WIE4 79 aa17.63■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Birc3O08863 600 aa17.63■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Ccdc173A0JLY1 547 aa17.63■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Gdpd2Q9ESM6 539 aa17.63■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Rnf123Q5XPI3 1314 aa17.63■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Gm45140A0A0N4SUM8 220 aa17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Trim28Q62318 834 aa17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Grpel1Q99LP6 217 aa17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Rnf214Q8BFU3 668 aaKnown RBP17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 BccipQ9CWI3 316 aa17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 PalmQ9Z0P4 383 aa17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 NalcnQ8BXR5 1738 aa17.62■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Cavin2Q63918 418 aaKnown RBP17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Kiaa0753Q6A000 959 aa17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 PtpruB1AUH1 1446 aa17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 MsnP26041 577 aaKnown RBP17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Idi1P58044 227 aa17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Amigo3Q8C2S7 508 aa17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 FanclQ9CR14 375 aa17.61■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Gm45015A0A140LII9 184 aa17.6■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Gm18336A0A140LIU8 765 aa17.6■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Gadd45bP22339 160 aa17.6■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Sox12Q04890 314 aa17.6■□□□□ 0.41
Clcnka-201ENSMUST00000042617 Fam43aQ8BUP8 424 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms