Protein–RNA interactions for Protein: A0A0N4SUM8

Gm45140, Predicted gene 45140, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm45140A0A0N4SUM8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
Gm45140A0A0N4SUM8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Gm45140A0A0N4SUM8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.49■■■■□ 3.43
Gm45140A0A0N4SUM8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm45140A0A0N4SUM8 Psd-208ENSMUST00000224556 2034 ntBASIC35.95■■■■□ 3.34
Gm45140A0A0N4SUM8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Gm45140A0A0N4SUM8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Gm45140A0A0N4SUM8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
Gm45140A0A0N4SUM8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
Gm45140A0A0N4SUM8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Gm45140A0A0N4SUM8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Gm45140A0A0N4SUM8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Gm45140A0A0N4SUM8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Gm45140A0A0N4SUM8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
Gm45140A0A0N4SUM8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.78■■■■□ 3
Gm45140A0A0N4SUM8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Gm45140A0A0N4SUM8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Gm45140A0A0N4SUM8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Gm45140A0A0N4SUM8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Gm45140A0A0N4SUM8 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.9■■■□□ 2.86
Gm45140A0A0N4SUM8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Gm45140A0A0N4SUM8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Gm45140A0A0N4SUM8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Gm45140A0A0N4SUM8 Gm25239-201ENSMUST00000174915 86 ntBASIC32.61■■■□□ 2.81
Gm45140A0A0N4SUM8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Gm45140A0A0N4SUM8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Gm45140A0A0N4SUM8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.4■■■□□ 2.78
Gm45140A0A0N4SUM8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.4■■■□□ 2.78
Gm45140A0A0N4SUM8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Gm45140A0A0N4SUM8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Gm45140A0A0N4SUM8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Gm45140A0A0N4SUM8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.24■■■□□ 2.75
Gm45140A0A0N4SUM8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Gm45140A0A0N4SUM8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Gm45140A0A0N4SUM8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.97■■■□□ 2.71
Gm45140A0A0N4SUM8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Gm45140A0A0N4SUM8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Gm45140A0A0N4SUM8 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.73■■■□□ 2.67
Gm45140A0A0N4SUM8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Gm45140A0A0N4SUM8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Gm45140A0A0N4SUM8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Gm45140A0A0N4SUM8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Gm45140A0A0N4SUM8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Gm45140A0A0N4SUM8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Gm45140A0A0N4SUM8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.25■■■□□ 2.59
Gm45140A0A0N4SUM8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
Gm45140A0A0N4SUM8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
Gm45140A0A0N4SUM8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Gm45140A0A0N4SUM8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.08■■■□□ 2.57
Gm45140A0A0N4SUM8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Gm45140A0A0N4SUM8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.04■■■□□ 2.56
Gm45140A0A0N4SUM8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Gm45140A0A0N4SUM8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Gm45140A0A0N4SUM8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Gm45140A0A0N4SUM8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Gm45140A0A0N4SUM8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Gm45140A0A0N4SUM8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Gm45140A0A0N4SUM8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Gm45140A0A0N4SUM8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Gm45140A0A0N4SUM8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Gm45140A0A0N4SUM8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Gm45140A0A0N4SUM8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.84■■■□□ 2.53
Gm45140A0A0N4SUM8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.83■■■□□ 2.53
Gm45140A0A0N4SUM8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Gm45140A0A0N4SUM8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.78■■■□□ 2.52
Gm45140A0A0N4SUM8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Gm45140A0A0N4SUM8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Gm45140A0A0N4SUM8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Gm45140A0A0N4SUM8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Gm45140A0A0N4SUM8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Gm45140A0A0N4SUM8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Gm45140A0A0N4SUM8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Gm45140A0A0N4SUM8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Gm45140A0A0N4SUM8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Gm45140A0A0N4SUM8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Gm45140A0A0N4SUM8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Gm45140A0A0N4SUM8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Gm45140A0A0N4SUM8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Gm45140A0A0N4SUM8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Gm45140A0A0N4SUM8 Gm15042-201ENSMUST00000120212 883 ntBASIC30.35■■■□□ 2.45
Gm45140A0A0N4SUM8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Gm45140A0A0N4SUM8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.26■■■□□ 2.44
Gm45140A0A0N4SUM8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Gm45140A0A0N4SUM8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Gm45140A0A0N4SUM8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Gm45140A0A0N4SUM8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
Gm45140A0A0N4SUM8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Gm45140A0A0N4SUM8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gm45140A0A0N4SUM8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Gm45140A0A0N4SUM8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gm45140A0A0N4SUM8 Gm15045-201ENSMUST00000117359 883 ntBASIC30.02■■■□□ 2.4
Gm45140A0A0N4SUM8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Gm45140A0A0N4SUM8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.98■■■□□ 2.39
Gm45140A0A0N4SUM8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gm45140A0A0N4SUM8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Gm45140A0A0N4SUM8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Gm45140A0A0N4SUM8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Gm45140A0A0N4SUM8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Gm45140A0A0N4SUM8 Zxda-201ENSMUST00000117281 2621 ntBASIC29.83■■■□□ 2.37
Gm45140A0A0N4SUM8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms