RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 NischQ80TM9 1593 aa27.6■■■□□ 2.01
Clcnka-201ENSMUST00000042617 Gm35339A0A140LHH9 1649 aa27.59■■■□□ 2.01
Clcnka-201ENSMUST00000042617 Abcc9P70170 1546 aa26.74■■□□□ 1.87
Clcnka-201ENSMUST00000042617 Abcc8B2RUS7 1588 aa26.5■■□□□ 1.83
Clcnka-201ENSMUST00000042617 ScribQ80U72 1612 aa25.28■■□□□ 1.64
Clcnka-201ENSMUST00000042617 Rtl1Q7M732 1744 aa25.13■■□□□ 1.61
Clcnka-201ENSMUST00000042617 Rhox8Q6VSS7 320 aa24.96■■□□□ 1.59
Clcnka-201ENSMUST00000042617 Rpgrip1Q9EPQ2 1331 aa24.87■■□□□ 1.57
Clcnka-201ENSMUST00000042617 Ccdc180J3QNE4 1664 aa24.78■■□□□ 1.56
Clcnka-201ENSMUST00000042617 Kdm5dQ62240 1548 aa24.54■■□□□ 1.52
Clcnka-201ENSMUST00000042617 NacadQ5SWP3 1504 aa24.4■■□□□ 1.5
Clcnka-201ENSMUST00000042617 Dcaf1Q80TR8 1506 aa24.4■■□□□ 1.5
Clcnka-201ENSMUST00000042617 Rb1cc1Q9ESK9 1588 aa24.12■■□□□ 1.45
Clcnka-201ENSMUST00000042617 Acin1Q9JIX8 1338 aaKnown RBP24.07■■□□□ 1.44
Clcnka-201ENSMUST00000042617 Zcchc6Q5BLK4 1491 aaKnown RBP23.94■■□□□ 1.42
Clcnka-201ENSMUST00000042617 Sycp2Q9CUU3 1500 aa23.94■■□□□ 1.42
Clcnka-201ENSMUST00000042617 Baz1aO88379 1555 aa23.77■■□□□ 1.4
Clcnka-201ENSMUST00000042617 BicraF8VPZ9 1578 aa23.61■■□□□ 1.37
Clcnka-201ENSMUST00000042617 Pcgf6Q99NA9 353 aa23.48■■□□□ 1.35
Clcnka-201ENSMUST00000042617 Crybg2B7ZCC2 1516 aa23.44■■□□□ 1.34
Clcnka-201ENSMUST00000042617 HrcG5E8J6 738 aa23.43■■□□□ 1.34
Clcnka-201ENSMUST00000042617 Ehmt2Q9Z148 1263 aaKnown RBP23.29■■□□□ 1.32
Clcnka-201ENSMUST00000042617 Ccdc136Q3TVA9 1136 aa23.18■■□□□ 1.3
Clcnka-201ENSMUST00000042617 Smarca2Q6DIC0 1577 aa23.17■■□□□ 1.3
Clcnka-201ENSMUST00000042617 Trim41Q5NCC3 630 aa22.99■■□□□ 1.27
Clcnka-201ENSMUST00000042617 Cecr2E9Q2Z1 1453 aa22.99■■□□□ 1.27
Clcnka-201ENSMUST00000042617 Supt5hO55201 1082 aaKnown RBP22.82■■□□□ 1.24
Clcnka-201ENSMUST00000042617 Smarca4Q3TKT4 1613 aaKnown RBP22.68■■□□□ 1.22
Clcnka-201ENSMUST00000042617 Pds5bQ4VA53 1446 aaKnown RBP22.63■■□□□ 1.21
Clcnka-201ENSMUST00000042617 Neurod1Q60867 357 aa22.6■■□□□ 1.21
Clcnka-201ENSMUST00000042617 Atad2bE9Q166 1460 aaKnown RBP22.58■■□□□ 1.21
Clcnka-201ENSMUST00000042617 Synj1Q8CHC4 1574 aa22.53■■□□□ 1.2
Clcnka-201ENSMUST00000042617 Cep164Q5DU05 1446 aa22.52■■□□□ 1.2
Clcnka-201ENSMUST00000042617 Iqgap2Q3UQ44 1575 aa22.51■■□□□ 1.19
Clcnka-201ENSMUST00000042617 Brd4Q9ESU6 1400 aaKnown RBP22.47■■□□□ 1.19
Clcnka-201ENSMUST00000042617 CftrP26361 1476 aa22.46■■□□□ 1.19
Clcnka-201ENSMUST00000042617 Las1lA2BE28 776 aaKnown RBP22.43■■□□□ 1.18
Clcnka-201ENSMUST00000042617 Dnajc5bQ9CQ94 199 aa22.41■■□□□ 1.18
Clcnka-201ENSMUST00000042617 Cttnbp2B9EJA2 1648 aa22.35■■□□□ 1.17
Clcnka-201ENSMUST00000042617 Thoc2B1AZI6 1594 aaKnown RBP22.29■■□□□ 1.16
Clcnka-201ENSMUST00000042617 NefmP08553 848 aa22.23■■□□□ 1.15
Clcnka-201ENSMUST00000042617 Frmpd1A2AKB4 1549 aa22.22■■□□□ 1.15
Clcnka-201ENSMUST00000042617 Cngb1E1AZ71 1325 aa22.2■■□□□ 1.14
Clcnka-201ENSMUST00000042617 Wdr62Q3U3T8 1523 aa22.19■■□□□ 1.14
Clcnka-201ENSMUST00000042617 Ercc6F8VPZ5 1481 aa22.18■■□□□ 1.14
Clcnka-201ENSMUST00000042617 Esf1Q3V1V3 845 aaKnown RBP22.15■■□□□ 1.14
Clcnka-201ENSMUST00000042617 Zeb1Q64318 1117 aa22.14■■□□□ 1.13
Clcnka-201ENSMUST00000042617 Golga3P55937 1487 aa22.1■■□□□ 1.13
Clcnka-201ENSMUST00000042617 Anks4bQ8K3X6 423 aa22.07■■□□□ 1.12
Clcnka-201ENSMUST00000042617 Chic1Q8CBW7 227 aa22.06■■□□□ 1.12
Clcnka-201ENSMUST00000042617 Sall2Q9QX96 1004 aa22.04■■□□□ 1.12
Clcnka-201ENSMUST00000042617 Cc2d2aQ8CFW7 1633 aa22.04■■□□□ 1.12
Clcnka-201ENSMUST00000042617 Rsf1E9PWW9 1441 aaKnown RBP22.03■■□□□ 1.12
Clcnka-201ENSMUST00000042617 Unc13aQ4KUS2 1712 aa22.01■■□□□ 1.11
Clcnka-201ENSMUST00000042617 1700123L14RikQ3V2K7 440 aa22■■□□□ 1.11
Clcnka-201ENSMUST00000042617 Gab3Q8BSM5 595 aa21.98■■□□□ 1.11
Clcnka-201ENSMUST00000042617 Mier1Q5UAK0 511 aa21.97■■□□□ 1.11
Clcnka-201ENSMUST00000042617 Ccdc88bQ4QRL3 1481 aa21.92■■□□□ 1.1
Clcnka-201ENSMUST00000042617 Top2bQ64511 1612 aa21.89■■□□□ 1.1
Clcnka-201ENSMUST00000042617 Fam135aQ6NS59 1506 aa21.86■■□□□ 1.09
Clcnka-201ENSMUST00000042617 Phldb1Q6PDH0 1371 aaKnown RBP21.85■■□□□ 1.09
Clcnka-201ENSMUST00000042617 Myt1Q8CFC2 1127 aa21.85■■□□□ 1.09
Clcnka-201ENSMUST00000042617 Csrnp3P59055 597 aa21.84■■□□□ 1.09
Clcnka-201ENSMUST00000042617 Ubl4bQ9CQ84 188 aa21.73■■□□□ 1.07
Clcnka-201ENSMUST00000042617 Aplp2Q06335 707 aa21.71■■□□□ 1.07
Clcnka-201ENSMUST00000042617 CenpbP27790 599 aa21.69■■□□□ 1.06
Clcnka-201ENSMUST00000042617 Kif15Q6P9L6 1387 aa21.63■■□□□ 1.05
Clcnka-201ENSMUST00000042617 Lamc3Q9R0B6 1581 aa21.6■■□□□ 1.05
Clcnka-201ENSMUST00000042617 Cdk11bP24788 784 aaKnown RBP21.59■■□□□ 1.05
Clcnka-201ENSMUST00000042617 Fmn1Q05860 1466 aa21.57■■□□□ 1.04
Clcnka-201ENSMUST00000042617 TnnQ80Z71 1560 aa21.55■■□□□ 1.04
Clcnka-201ENSMUST00000042617 ClspnQ80YR7 1315 aa21.53■■□□□ 1.04
Clcnka-201ENSMUST00000042617 Nop58Q6DFW4 536 aaKnown RBP21.51■■□□□ 1.03
Clcnka-201ENSMUST00000042617 Aebp2Q9Z248 504 aaKnown RBP21.51■■□□□ 1.03
Clcnka-201ENSMUST00000042617 Wdr66E9Q743 1299 aa21.5■■□□□ 1.03
Clcnka-201ENSMUST00000042617 Cux2P70298 1426 aa21.48■■□□□ 1.03
Clcnka-201ENSMUST00000042617 Top2aQ01320 1528 aaKnown RBP21.43■■□□□ 1.02
Clcnka-201ENSMUST00000042617 Il27Q8K3I6 234 aa21.42■■□□□ 1.02
Clcnka-201ENSMUST00000042617 Mrc2Q64449 1479 aa21.38■■□□□ 1.01
Clcnka-201ENSMUST00000042617 Camsap1A2AHC3 1581 aa21.33■■□□□ 1
Clcnka-201ENSMUST00000042617 Rapgef2Q8CHG7 1496 aa21.32■■□□□ 1
Clcnka-201ENSMUST00000042617 Baz1bQ9Z277 1479 aa21.32■■□□□ 1
Clcnka-201ENSMUST00000042617 UbtfP25976 765 aaKnown RBP21.27■■□□□ 1
Clcnka-201ENSMUST00000042617 Npm1Q61937 292 aaKnown RBP21.26■□□□□ 0.99
Clcnka-201ENSMUST00000042617 Ccdc18Q640L5 1455 aa21.23■□□□□ 0.99
Clcnka-201ENSMUST00000042617 Kif21aQ9QXL2 1672 aa21.2■□□□□ 0.98
Clcnka-201ENSMUST00000042617 TonslQ6NZL6 1363 aa21.17■□□□□ 0.98
Clcnka-201ENSMUST00000042617 Cep162Q6ZQ06 1403 aa21.16■□□□□ 0.98
Clcnka-201ENSMUST00000042617 Npm2Q80W85 207 aa21.12■□□□□ 0.97
Clcnka-201ENSMUST00000042617 LrpprcQ6PB66 1392 aaKnown RBP21.11■□□□□ 0.97
Clcnka-201ENSMUST00000042617 PtprkP35822 1457 aa21.1■□□□□ 0.97
Clcnka-201ENSMUST00000042617 Grin2bQ01097 1482 aa21.1■□□□□ 0.97
Clcnka-201ENSMUST00000042617 Gm38655A0A286YDK6 273 aa21.09■□□□□ 0.97
Clcnka-201ENSMUST00000042617 Myt1lP97500 1187 aa21.09■□□□□ 0.97
Clcnka-201ENSMUST00000042617 Ppargc1bQ8VHJ7 1014 aa21.07■□□□□ 0.96
Clcnka-201ENSMUST00000042617 Dhx29Q6PGC1 1365 aaKnown RBP21.07■□□□□ 0.96
Clcnka-201ENSMUST00000042617 PogzQ8BZH4 1409 aaKnown RBP21.02■□□□□ 0.96
Clcnka-201ENSMUST00000042617 Eif4g1Q6NZJ6 1600 aaKnown RBP20.99■□□□□ 0.95
Clcnka-201ENSMUST00000042617 Duox2A2AQ99 1517 aa20.98■□□□□ 0.95
Clcnka-201ENSMUST00000042617 DiexfQ8BTT6 772 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms