RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C GPT2P36148 743 aa2.85□□□□□ -1.95
NIP100YPL174C POL5P39985 1022 aaKnown RBP2.85□□□□□ -1.95
NIP100YPL174C YLR122CQ12312 125 aa2.85□□□□□ -1.95
NIP100YPL174C TRL1P09880 827 aaKnown RBP2.84□□□□□ -1.95
NIP100YPL174C MSB1P21339 1137 aaKnown RBP2.84□□□□□ -1.95
NIP100YPL174C WHI3P34761 661 aaKnown RBP2.84□□□□□ -1.95
NIP100YPL174C YNR063WP53749 607 aa2.84□□□□□ -1.95
NIP100YPL174C YCS4Q06156 1176 aa2.84□□□□□ -1.95
NIP100YPL174C HSE1P38753 452 aa2.84□□□□□ -1.96
NIP100YPL174C RVS167P39743 482 aaKnown RBP2.84□□□□□ -1.96
NIP100YPL174C MMM1P41800 426 aa2.84□□□□□ -1.96
NIP100YPL174C ELA1P53861 379 aaPredicted RBP2.84□□□□□ -1.96
NIP100YPL174C MGE1P38523 228 aa2.83□□□□□ -1.96
NIP100YPL174C GCV1P48015 400 aa2.83□□□□□ -1.96
NIP100YPL174C NUT1P53114 1132 aa2.83□□□□□ -1.96
NIP100YPL174C CMR1Q12510 522 aaKnown RBP2.83□□□□□ -1.96
NIP100YPL174C YAF9P53930 226 aa2.83□□□□□ -1.96
NIP100YPL174C HTS1P07263 546 aaKnown RBP2.82□□□□□ -1.96
NIP100YPL174C PEP7P32609 515 aa2.82□□□□□ -1.96
NIP100YPL174C VPS35P34110 944 aa2.82□□□□□ -1.96
NIP100YPL174C MEC3Q02574 474 aa2.82□□□□□ -1.96
NIP100YPL174C MSC6Q08818 692 aaKnown RBP2.82□□□□□ -1.96
NIP100YPL174C DED1P06634 604 aaKnown RBP2.82□□□□□ -1.96
NIP100YPL174C PRP40P33203 583 aaKnown RBP2.82□□□□□ -1.96
NIP100YPL174C RPT1P33299 467 aaKnown RBP2.82□□□□□ -1.96
NIP100YPL174C CIT3P43635 486 aa2.82□□□□□ -1.96
NIP100YPL174C SPO74P45819 413 aa2.82□□□□□ -1.96
NIP100YPL174C NCE103P53615 221 aa2.82□□□□□ -1.96
NIP100YPL174C RCM1P53972 490 aa2.82□□□□□ -1.96
NIP100YPL174C LAP2Q10740 671 aa2.82□□□□□ -1.96
NIP100YPL174C TRP3P00937 484 aa2.81□□□□□ -1.96
NIP100YPL174C RPS4AP0CX35 261 aaKnown RBP2.81□□□□□ -1.96
NIP100YPL174C RPS4BP0CX36 261 aaKnown RBP2.81□□□□□ -1.96
NIP100YPL174C NFS1P25374 497 aa2.81□□□□□ -1.96
NIP100YPL174C PPX1P38698 397 aa2.81□□□□□ -1.96
NIP100YPL174C FOL2P51601 243 aaKnown RBP2.81□□□□□ -1.96
NIP100YPL174C YIG1Q08956 461 aa2.81□□□□□ -1.96
NIP100YPL174C IPL1P38991 367 aa2.81□□□□□ -1.96
NIP100YPL174C MSH6Q03834 1242 aa2.81□□□□□ -1.96
NIP100YPL174C YKR073CP36153 106 aa2.8□□□□□ -1.96
NIP100YPL174C RIM11P38615 370 aa2.8□□□□□ -1.96
NIP100YPL174C YAR028WP39548 234 aa2.8□□□□□ -1.96
NIP100YPL174C CTR9P89105 1077 aa2.8□□□□□ -1.96
NIP100YPL174C SDH1Q00711 640 aa2.8□□□□□ -1.96
NIP100YPL174C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
NIP100YPL174C YML020WQ03722 664 aa2.8□□□□□ -1.96
NIP100YPL174C TPP1Q03796 238 aa2.8□□□□□ -1.96
NIP100YPL174C COBP00163 385 aa2.8□□□□□ -1.96
NIP100YPL174C YOR352WQ08816 343 aa2.8□□□□□ -1.96
NIP100YPL174C MNL2Q12205 849 aa2.8□□□□□ -1.96
NIP100YPL174C POL32P47110 350 aa2.79□□□□□ -1.96
NIP100YPL174C GPI13Q07830 1017 aa2.79□□□□□ -1.96
NIP100YPL174C YOR059CQ08448 450 aaKnown RBP2.79□□□□□ -1.96
NIP100YPL174C DUR3P33413 735 aa2.79□□□□□ -1.96
NIP100YPL174C BRE4Q07660 1125 aa2.79□□□□□ -1.96
NIP100YPL174C HRK1Q08732 759 aaKnown RBP2.79□□□□□ -1.96
NIP100YPL174C MSH3P25336 1018 aa2.78□□□□□ -1.96
NIP100YPL174C PGM1P33401 570 aaKnown RBP2.78□□□□□ -1.96
NIP100YPL174C NNK1P36003 928 aa2.78□□□□□ -1.96
NIP100YPL174C POL12P38121 705 aaPredicted RBP2.78□□□□□ -1.96
NIP100YPL174C PEX28P38848 579 aa2.78□□□□□ -1.96
NIP100YPL174C MSH4P40965 878 aaPredicted RBP2.78□□□□□ -1.96
NIP100YPL174C XKS1P42826 600 aa2.78□□□□□ -1.96
NIP100YPL174C YGR045CP53229 120 aa2.78□□□□□ -1.96
NIP100YPL174C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
NIP100YPL174C PRO1P32264 428 aa2.78□□□□□ -1.96
NIP100YPL174C NMD3P38861 518 aaKnown RBP2.78□□□□□ -1.96
NIP100YPL174C MRPS18P42847 217 aa2.78□□□□□ -1.96
NIP100YPL174C SLS1P42900 643 aa2.78□□□□□ -1.96
NIP100YPL174C ULP1Q02724 621 aa2.78□□□□□ -1.96
NIP100YPL174C PHO4P07270 312 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C TY1A-LR4P0C2I8 440 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C TY1A-DR6P0CX70 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-ER1P0CX71 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-LR2P0CX72 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-PLP0CX73 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-JR1P0CX74 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-LR3P0CX75 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-ML2P0CX76 440 aa2.77□□□□□ -1.97
NIP100YPL174C ADP1P25371 1049 aa2.77□□□□□ -1.97
NIP100YPL174C PUB1P32588 453 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
NIP100YPL174C SMY2P32909 740 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C GTS1P40956 396 aa2.77□□□□□ -1.97
NIP100YPL174C DAK2P43550 591 aa2.77□□□□□ -1.97
NIP100YPL174C AVT1P47082 602 aa2.77□□□□□ -1.97
NIP100YPL174C YLR257WQ06146 321 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C TY1A-GR1Q12085 440 aa2.77□□□□□ -1.97
NIP100YPL174C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C TY1A-OLQ92392 440 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C HVG1P0CE11 249 aa2.77□□□□□ -1.97
NIP100YPL174C MET4P32389 672 aa2.77□□□□□ -1.97
NIP100YPL174C ARL1P38116 183 aaKnown RBP2.77□□□□□ -1.97
NIP100YPL174C RAD27P26793 382 aa2.76□□□□□ -1.97
NIP100YPL174C RSB1Q08417 382 aa2.76□□□□□ -1.97
NIP100YPL174C UGA4P32837 571 aa2.76□□□□□ -1.97
NIP100YPL174C NEM1P38757 446 aa2.76□□□□□ -1.97
NIP100YPL174C PTC7P38797 343 aa2.76□□□□□ -1.97
NIP100YPL174C MRL1Q06815 381 aa2.76□□□□□ -1.97
NIP100YPL174C WHI5Q12416 295 aa2.76□□□□□ -1.97
NIP100YPL174C GCD1P09032 578 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms