RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	CAF120	P53836	1060 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	YNL247W	P53852	767 aa	Known RBP	2.95	□□□□□ -1.94
LCL1	YPL056C	TIM11	P81449	96 aa	Predicted RBP	2.95	□□□□□ -1.94
LCL1	YPL056C	CUS1	Q02554	436 aa	Predicted RBP	2.95	□□□□□ -1.94
LCL1	YPL056C	SYH1	Q02875	849 aa	Known RBP	2.95	□□□□□ -1.94
LCL1	YPL056C	FMP30	Q02883	468 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	YML119W	Q03208	357 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	KRE28	Q04431	385 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	HRQ1	Q05549	1077 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	COG4	Q06096	861 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	NOC3	Q07896	663 aa	Predicted RBP	2.95	□□□□□ -1.94
LCL1	YPL056C	CMS1	Q07897	291 aa	Known RBP	2.95	□□□□□ -1.94
LCL1	YPL056C	ATG9	Q12142	997 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	LYS2	P07702	1392 aa		2.95	□□□□□ -1.94
LCL1	YPL056C	PDR18	P53756	1333 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	KRS1	P15180	591 aa	Known RBP	2.94	□□□□□ -1.94
LCL1	YPL056C	STE11	P23561	717 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	CDC48	P25694	835 aa	Known RBP	2.94	□□□□□ -1.94
LCL1	YPL056C	CPS1	P27614	576 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	BUD14	P27637	709 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	MRF1	P30775	413 aa	Predicted RBP	2.94	□□□□□ -1.94
LCL1	YPL056C	TPD3	P31383	635 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	CSE1	P33307	960 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	RRP1	P35178	278 aa	Predicted RBP	2.94	□□□□□ -1.94
LCL1	YPL056C	HEL1	P36113	551 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	RPC37	P36121	282 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	SRL3	P36167	246 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	YBL086C	P38177	466 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	RGD1	P38339	666 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	EFM2	P38347	419 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	DMA1	P38823	416 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	VID28	P40547	921 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	GYP7	P48365	746 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	YGR035C	P53222	116 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	SSL2	Q00578	843 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	RSA3	Q05942	220 aa	Known RBP	2.94	□□□□□ -1.94
LCL1	YPL056C	YPR172W	Q06608	200 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	APC2	Q12440	853 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	YRF1-3	P0CX14	1859 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	YRF1-7	P0CX15	1859 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	YRF1-6	P53819	1859 aa		2.94	□□□□□ -1.94
LCL1	YPL056C	SWI1	P09547	1314 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	ADE6	P38972	1358 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	TRL1	P09880	827 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	FAR1	P21268	830 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	SEC66	P33754	206 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	YEL1	P34225	687 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	SLD2	P34252	453 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	LHS1	P36016	881 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	TAF5	P38129	798 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	ATG14	P38270	344 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	RPN11	P43588	306 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
LCL1	YPL056C	TPO2	P53283	614 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	ASI1	P54074	624 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	PKH1	Q03407	766 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	VPS20	Q04272	221 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	HEL2	Q05580	639 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	MRD1	Q06106	887 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	RRP9	Q06506	573 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	OMS1	Q06668	471 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	RIX7	Q07844	837 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	DNL4	Q08387	944 aa	Predicted RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	CHS5	Q12114	671 aa	Known RBP	2.93	□□□□□ -1.94
LCL1	YPL056C	APC11	Q12157	165 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	WHI5	Q12416	295 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	SMC6	Q12749	1114 aa		2.93	□□□□□ -1.94
LCL1	YPL056C	YIL177C	P40434	1758 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	YJL225C	P40889	1758 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	SIR4	P11978	1358 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	RSF2	P46974	1380 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	SES1	P07284	462 aa	Known RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	PMR1	P13586	950 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	PRP16	P15938	1071 aa	Predicted RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	TUP1	P16649	713 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	PRP5	P21372	849 aa	Predicted RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	MET4	P32389	672 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	ASF1	P32447	279 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	HIR2	P32480	875 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	SEC6	P32844	805 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	DLD1	P32891	587 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	VPS35	P34110	944 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	MUD2	P36084	527 aa	Known RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	DID4	P36108	232 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	YLF2	P38746	405 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	IES2	P40154	320 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	DOT5	P40553	215 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	SEC27	P41811	889 aa	Known RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	BTN2	P53286	410 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	RCM1	P53972	490 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	VTC3	Q02725	835 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	HEH2	Q03281	663 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	DPL1	Q05567	589 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	TSR1	Q07381	788 aa	Known RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	BRR1	Q99177	341 aa	Predicted RBP	2.92	□□□□□ -1.94
LCL1	YPL056C	APC1	P53886	1748 aa		2.92	□□□□□ -1.94
LCL1	YPL056C	CDC31	P06704	161 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	SUI3	P09064	285 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	PET122	P10355	254 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	BIK1	P11709	440 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 287.8 ms