RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C PEX29Q03370 554 aa6.74□□□□□ -1.33
UBC11YOR339C VPS20Q04272 221 aa6.74□□□□□ -1.33
UBC11YOR339C MYO5Q04439 1219 aaKnown RBP6.74□□□□□ -1.33
UBC11YOR339C MATALPHA2P0CY08 210 aa6.73□□□□□ -1.33
UBC11YOR339C HMLALPHA2P0CY09 210 aa6.73□□□□□ -1.33
UBC11YOR339C KRS1P15180 591 aaKnown RBP6.73□□□□□ -1.33
UBC11YOR339C SAM2P19358 384 aaKnown RBP6.73□□□□□ -1.33
UBC11YOR339C SIS2P36024 562 aa6.73□□□□□ -1.33
UBC11YOR339C NPA3P47122 385 aa6.73□□□□□ -1.33
UBC11YOR339C ENT3P47160 408 aa6.73□□□□□ -1.33
UBC11YOR339C RRT6P53117 311 aaPredicted RBP6.73□□□□□ -1.33
UBC11YOR339C FOL1P53848 824 aa6.73□□□□□ -1.33
UBC11YOR339C RPT6Q01939 405 aaKnown RBP6.73□□□□□ -1.33
UBC11YOR339C TYW1Q08960 810 aaKnown RBP6.73□□□□□ -1.33
UBC11YOR339C GIN4Q12263 1142 aa6.73□□□□□ -1.33
UBC11YOR339C MYO1P08964 1928 aa6.73□□□□□ -1.33
UBC11YOR339C RPL19AP0CX82 189 aaKnown RBP6.72□□□□□ -1.33
UBC11YOR339C RPL19BP0CX83 189 aaPredicted RBP6.72□□□□□ -1.33
UBC11YOR339C RPL8BP29453 256 aaKnown RBP6.72□□□□□ -1.33
UBC11YOR339C TIF4631P39935 952 aaKnown RBP6.72□□□□□ -1.33
UBC11YOR339C ALG2P43636 503 aa6.72□□□□□ -1.33
UBC11YOR339C VPS30Q02948 557 aa6.72□□□□□ -1.33
UBC11YOR339C YOR111WQ99210 232 aa6.72□□□□□ -1.33
UBC11YOR339C TUS1Q06412 1307 aa6.72□□□□□ -1.33
UBC11YOR339C NUC1P08466 329 aa6.71□□□□□ -1.34
UBC11YOR339C FBP1P09201 348 aa6.71□□□□□ -1.34
UBC11YOR339C SRP54P20424 541 aaKnown RBP6.71□□□□□ -1.34
UBC11YOR339C HCA4P20448 770 aaKnown RBP6.71□□□□□ -1.34
UBC11YOR339C SPB4P25808 606 aaPredicted RBP6.71□□□□□ -1.34
UBC11YOR339C PCS60P38137 543 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
UBC11YOR339C MAL31P38156 614 aa6.71□□□□□ -1.34
UBC11YOR339C UBP9P39967 754 aa6.71□□□□□ -1.34
UBC11YOR339C YLR407WQ06070 228 aa6.71□□□□□ -1.34
UBC11YOR339C PSK2Q08217 1101 aa6.71□□□□□ -1.34
UBC11YOR339C TOM1Q03280 3268 aa6.71□□□□□ -1.34
UBC11YOR339C ERG12P07277 443 aa6.7□□□□□ -1.34
UBC11YOR339C RNR3P21672 869 aaKnown RBP6.7□□□□□ -1.34
UBC11YOR339C YHL017WP38745 532 aa6.7□□□□□ -1.34
UBC11YOR339C TGL3P40308 642 aa6.7□□□□□ -1.34
UBC11YOR339C CLF1Q12309 687 aaPredicted RBP6.7□□□□□ -1.34
UBC11YOR339C HVG1P0CE11 249 aa6.69□□□□□ -1.34
UBC11YOR339C SWI4P25302 1093 aaKnown RBP6.69□□□□□ -1.34
UBC11YOR339C YDJ1P25491 409 aaKnown RBP6.69□□□□□ -1.34
UBC11YOR339C BMH2P34730 273 aaKnown RBP6.69□□□□□ -1.34
UBC11YOR339C OCT1P35999 772 aa6.69□□□□□ -1.34
UBC11YOR339C RPN10P38886 268 aaKnown RBP6.69□□□□□ -1.34
UBC11YOR339C VPS45P38932 577 aa6.69□□□□□ -1.34
UBC11YOR339C PES4P39684 611 aa6.69□□□□□ -1.34
UBC11YOR339C BUD6P41697 788 aa6.69□□□□□ -1.34
UBC11YOR339C MDM1Q01846 1127 aa6.69□□□□□ -1.34
UBC11YOR339C SUE1Q06524 206 aa6.69□□□□□ -1.34
UBC11YOR339C ELG1Q12050 791 aa6.69□□□□□ -1.34
UBC11YOR339C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
UBC11YOR339C CPA2P03965 1118 aaKnown RBP6.68□□□□□ -1.34
UBC11YOR339C MET6P05694 767 aaKnown RBP6.68□□□□□ -1.34
UBC11YOR339C BIK1P11709 440 aa6.68□□□□□ -1.34
UBC11YOR339C RXT2P38255 430 aa6.68□□□□□ -1.34
UBC11YOR339C PCI8P40512 444 aa6.68□□□□□ -1.34
UBC11YOR339C LYS14P40971 790 aa6.68□□□□□ -1.34
UBC11YOR339C YJL007CP47080 104 aa6.68□□□□□ -1.34
UBC11YOR339C YGL081WP53156 320 aa6.68□□□□□ -1.34
UBC11YOR339C YML037CQ03703 340 aa6.68□□□□□ -1.34
UBC11YOR339C YDR341CQ05506 607 aaKnown RBP6.68□□□□□ -1.34
UBC11YOR339C SUB2Q07478 446 aaKnown RBP6.68□□□□□ -1.34
UBC11YOR339C DSE3Q08729 430 aa6.68□□□□□ -1.34
UBC11YOR339C YPL150WQ12152 901 aa6.68□□□□□ -1.34
UBC11YOR339C CIT1P00890 479 aa6.67□□□□□ -1.34
UBC11YOR339C STI1P15705 589 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
UBC11YOR339C CBP3P21560 335 aa6.67□□□□□ -1.34
UBC11YOR339C VPS1P21576 704 aaKnown RBP6.67□□□□□ -1.34
UBC11YOR339C DIT2P21595 489 aa6.67□□□□□ -1.34
UBC11YOR339C IME2P32581 645 aa6.67□□□□□ -1.34
UBC11YOR339C PRX1P34227 261 aaKnown RBP6.67□□□□□ -1.34
UBC11YOR339C TTI1P36097 1038 aa6.67□□□□□ -1.34
UBC11YOR339C RFC5P38251 354 aa6.67□□□□□ -1.34
UBC11YOR339C BSD2P38356 321 aa6.67□□□□□ -1.34
UBC11YOR339C TOM71P38825 639 aaKnown RBP6.67□□□□□ -1.34
UBC11YOR339C SOL4P53315 255 aa6.67□□□□□ -1.34
UBC11YOR339C HRQ1Q05549 1077 aa6.67□□□□□ -1.34
UBC11YOR339C UTP4Q06679 776 aaKnown RBP6.67□□□□□ -1.34
UBC11YOR339C LSP1Q12230 341 aaKnown RBP6.67□□□□□ -1.34
UBC11YOR339C HSP82P02829 709 aaKnown RBP6.66□□□□□ -1.34
UBC11YOR339C CDC6P09119 513 aa6.66□□□□□ -1.34
UBC11YOR339C VPS24P36095 224 aaKnown RBP6.66□□□□□ -1.34
UBC11YOR339C ETP1P38748 585 aaKnown RBP6.66□□□□□ -1.34
UBC11YOR339C NDT80P38830 627 aa6.66□□□□□ -1.34
UBC11YOR339C VAB2P40003 282 aa6.66□□□□□ -1.34
UBC11YOR339C ASE1P50275 885 aa6.66□□□□□ -1.34
UBC11YOR339C GDE1Q02979 1223 aa6.66□□□□□ -1.34
UBC11YOR339C JIP4Q03361 876 aa6.66□□□□□ -1.34
UBC11YOR339C GIS4Q04233 774 aa6.66□□□□□ -1.34
UBC11YOR339C RBA50Q04418 439 aa6.66□□□□□ -1.34
UBC11YOR339C UBX5Q06682 500 aa6.66□□□□□ -1.34
UBC11YOR339C RAD18P10862 487 aa6.65□□□□□ -1.34
UBC11YOR339C PER1P25625 357 aa6.65□□□□□ -1.34
UBC11YOR339C MCD4P36051 919 aa6.65□□□□□ -1.34
UBC11YOR339C MAL33P38157 468 aa6.65□□□□□ -1.34
UBC11YOR339C DJP1P40564 432 aa6.65□□□□□ -1.34
UBC11YOR339C NET1P47035 1189 aa6.65□□□□□ -1.34
UBC11YOR339C PEX14P53112 341 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms