RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W ALT1P52893 592 aa4.78□□□□□ -1.64
PEP12YOR036W SSY1Q03770 852 aa4.78□□□□□ -1.64
PEP12YOR036W YLL054CQ12244 843 aa4.78□□□□□ -1.64
PEP12YOR036W SSA4P22202 642 aaKnown RBP4.77□□□□□ -1.65
PEP12YOR036W FLR1P38124 548 aa4.77□□□□□ -1.65
PEP12YOR036W ALG6Q12001 544 aaKnown RBP4.77□□□□□ -1.65
PEP12YOR036W LPX1Q12405 387 aaKnown RBP4.77□□□□□ -1.65
PEP12YOR036W FUR4P05316 633 aaKnown RBP4.76□□□□□ -1.65
PEP12YOR036W PRP6P19735 899 aaPredicted RBP4.76□□□□□ -1.65
PEP12YOR036W PEX7P39108 375 aa4.76□□□□□ -1.65
PEP12YOR036W MEC3Q02574 474 aa4.76□□□□□ -1.65
PEP12YOR036W TRE1Q08919 783 aa4.76□□□□□ -1.65
PEP12YOR036W PRP5P21372 849 aaPredicted RBP4.75□□□□□ -1.65
PEP12YOR036W YVC1Q12324 675 aa4.75□□□□□ -1.65
PEP12YOR036W PRO1P32264 428 aa4.74□□□□□ -1.65
PEP12YOR036W AIM3P38266 947 aaKnown RBP4.73□□□□□ -1.65
PEP12YOR036W UTP22P53254 1237 aaPredicted RBP4.73□□□□□ -1.65
PEP12YOR036W RSC4Q02206 625 aa4.73□□□□□ -1.65
PEP12YOR036W HDA2Q06629 674 aa4.73□□□□□ -1.65
PEP12YOR036W YDL177CQ12257 170 aa4.73□□□□□ -1.65
PEP12YOR036W REI1P38344 393 aaPredicted RBP4.72□□□□□ -1.65
PEP12YOR036W NFS1P25374 497 aa4.71□□□□□ -1.66
PEP12YOR036W MSH6Q03834 1242 aa4.71□□□□□ -1.66
PEP12YOR036W SMY2P32909 740 aaKnown RBP4.7□□□□□ -1.66
PEP12YOR036W PTC7P38797 343 aa4.7□□□□□ -1.66
PEP12YOR036W YGR045CP53229 120 aa4.7□□□□□ -1.66
PEP12YOR036W ELA1P53861 379 aaPredicted RBP4.7□□□□□ -1.66
PEP12YOR036W MRPL22P53881 309 aa4.7□□□□□ -1.66
PEP12YOR036W TY1A-LR4P0C2I8 440 aaKnown RBP4.69□□□□□ -1.66
PEP12YOR036W TY1A-DR6P0CX70 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-ER1P0CX71 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-LR2P0CX72 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-PLP0CX73 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-JR1P0CX74 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-LR3P0CX75 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-ML2P0CX76 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-GR1Q12085 440 aa4.69□□□□□ -1.66
PEP12YOR036W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.69□□□□□ -1.66
PEP12YOR036W TY1A-OLQ92392 440 aaKnown RBP4.69□□□□□ -1.66
PEP12YOR036W ECM2P38241 364 aaKnown RBP4.68□□□□□ -1.66
PEP12YOR036W GTS1P40956 396 aa4.68□□□□□ -1.66
PEP12YOR036W SAP155P43612 1002 aa4.67□□□□□ -1.66
PEP12YOR036W RIM8P53179 542 aa4.67□□□□□ -1.66
PEP12YOR036W UFD2P54860 961 aa4.67□□□□□ -1.66
PEP12YOR036W GIS1Q03833 894 aa4.67□□□□□ -1.66
PEP12YOR036W NNK1P36003 928 aa4.66□□□□□ -1.66
PEP12YOR036W GLO3P38682 493 aaKnown RBP4.66□□□□□ -1.66
PEP12YOR036W ETP1P38748 585 aaKnown RBP4.66□□□□□ -1.66
PEP12YOR036W QDR1P40475 563 aa4.66□□□□□ -1.66
PEP12YOR036W PUS7Q08647 676 aaKnown RBP4.65□□□□□ -1.67
PEP12YOR036W FLP1P03870 423 aa4.64□□□□□ -1.67
PEP12YOR036W TOD6P34219 525 aa4.64□□□□□ -1.67
PEP12YOR036W YAF9P53930 226 aa4.64□□□□□ -1.67
PEP12YOR036W AVO1Q08236 1176 aa4.64□□□□□ -1.67
PEP12YOR036W MNL2Q12205 849 aa4.64□□□□□ -1.67
PEP12YOR036W SOD2P00447 233 aa4.63□□□□□ -1.67
PEP12YOR036W ARL1P38116 183 aaKnown RBP4.63□□□□□ -1.67
PEP12YOR036W NUT1P53114 1132 aa4.63□□□□□ -1.67
PEP12YOR036W TPP1Q03796 238 aa4.63□□□□□ -1.67
PEP12YOR036W YPL277CQ08989 487 aa4.63□□□□□ -1.67
PEP12YOR036W NMD3P38861 518 aaKnown RBP4.62□□□□□ -1.67
PEP12YOR036W YNL011CP53980 444 aa4.62□□□□□ -1.67
PEP12YOR036W KAR5Q04746 504 aa4.62□□□□□ -1.67
PEP12YOR036W BSC2Q05611 235 aa4.62□□□□□ -1.67
PEP12YOR036W PMT7Q06644 662 aa4.62□□□□□ -1.67
PEP12YOR036W SAM35P14693 329 aa4.61□□□□□ -1.67
PEP12YOR036W EXO5P38289 585 aa4.61□□□□□ -1.67
PEP12YOR036W SLS1P42900 643 aa4.61□□□□□ -1.67
PEP12YOR036W RPS13P05756 151 aaKnown RBP4.6□□□□□ -1.67
PEP12YOR036W MCM5P29496 775 aaKnown RBP4.6□□□□□ -1.67
PEP12YOR036W TRS120Q04183 1289 aa4.6□□□□□ -1.67
PEP12YOR036W NEM1P38757 446 aa4.59□□□□□ -1.67
PEP12YOR036W ATG1P53104 897 aa4.59□□□□□ -1.67
PEP12YOR036W CDC55Q00362 526 aa4.59□□□□□ -1.67
PEP12YOR036W SUB2Q07478 446 aaKnown RBP4.59□□□□□ -1.67
PEP12YOR036W YHL012WP38709 493 aa4.58□□□□□ -1.68
PEP12YOR036W MON1P53129 644 aa4.58□□□□□ -1.68
PEP12YOR036W CLU1Q03690 1277 aaKnown RBP4.58□□□□□ -1.68
PEP12YOR036W INP54Q08227 384 aaKnown RBP4.58□□□□□ -1.68
PEP12YOR036W ABZ1P37254 787 aaPredicted RBP4.57□□□□□ -1.68
PEP12YOR036W ACF4P47129 309 aa4.57□□□□□ -1.68
PEP12YOR036W SNO2P53823 222 aa4.57□□□□□ -1.68
PEP12YOR036W GSF2Q04697 403 aaKnown RBP4.57□□□□□ -1.68
PEP12YOR036W YLR257WQ06146 321 aaKnown RBP4.57□□□□□ -1.68
PEP12YOR036W RET1P22276 1149 aaKnown RBP4.56□□□□□ -1.68
PEP12YOR036W CTS1P29029 562 aa4.56□□□□□ -1.68
PEP12YOR036W YKL077WP36081 392 aa4.56□□□□□ -1.68
PEP12YOR036W YAR028WP39548 234 aa4.56□□□□□ -1.68
PEP12YOR036W RVS167P39743 482 aaKnown RBP4.56□□□□□ -1.68
PEP12YOR036W SHM2P37291 469 aaKnown RBP4.55□□□□□ -1.68
PEP12YOR036W PRE10P21242 288 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
PEP12YOR036W MDL2P33311 773 aa4.54□□□□□ -1.68
PEP12YOR036W YDR132CQ03900 495 aa4.54□□□□□ -1.68
PEP12YOR036W RSA3Q05942 220 aaKnown RBP4.54□□□□□ -1.68
PEP12YOR036W AIM26P32858 118 aa4.53□□□□□ -1.68
PEP12YOR036W FOL2P51601 243 aaKnown RBP4.53□□□□□ -1.68
PEP12YOR036W GPI13Q07830 1017 aa4.53□□□□□ -1.68
PEP12YOR036W YLR358CO13565 187 aa4.52□□□□□ -1.69
PEP12YOR036W TUB2P02557 457 aaKnown RBP4.52□□□□□ -1.69
PEP12YOR036W TRL1P09880 827 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms