RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C LDH1P38139 375 aa6.54□□□□□ -1.36
CCS1YMR038C ACF4P47129 309 aa6.54□□□□□ -1.36
CCS1YMR038C CTH1P47976 325 aa6.54□□□□□ -1.36
CCS1YMR038C SKP1P52286 194 aa6.54□□□□□ -1.36
CCS1YMR038C SUT1P53032 299 aaKnown RBP6.54□□□□□ -1.36
CCS1YMR038C CUS1Q02554 436 aaPredicted RBP6.54□□□□□ -1.36
CCS1YMR038C BSD2P38356 321 aa6.53□□□□□ -1.36
CCS1YMR038C HXT8P40886 569 aa6.53□□□□□ -1.36
CCS1YMR038C YMR265CQ03508 461 aaKnown RBP6.53□□□□□ -1.36
CCS1YMR038C FKS3Q04952 1785 aa6.53□□□□□ -1.36
CCS1YMR038C MSN1P22148 382 aa6.52□□□□□ -1.37
CCS1YMR038C NOP7P53261 605 aaKnown RBP6.52□□□□□ -1.37
CCS1YMR038C ALD3P54114 506 aa6.52□□□□□ -1.37
CCS1YMR038C SEN54Q02825 467 aaPredicted RBP6.52□□□□□ -1.37
CCS1YMR038C FRT1Q99332 602 aa6.52□□□□□ -1.37
CCS1YMR038C GBP2P25555 427 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
CCS1YMR038C YKL133CP36066 463 aa6.51□□□□□ -1.37
CCS1YMR038C NUT2Q06213 157 aa6.51□□□□□ -1.37
CCS1YMR038C YOR296WQ08748 1289 aa6.51□□□□□ -1.37
CCS1YMR038C COBP00163 385 aa6.5□□□□□ -1.37
CCS1YMR038C YHL050CP38721 697 aa6.5□□□□□ -1.37
CCS1YMR038C YHR219WP38900 624 aa6.5□□□□□ -1.37
CCS1YMR038C YNR040WP53736 256 aa6.5□□□□□ -1.37
CCS1YMR038C KRE33P53914 1056 aaKnown RBP6.5□□□□□ -1.37
CCS1YMR038C SPT7P35177 1332 aa6.5□□□□□ -1.37
CCS1YMR038C GIP1P38229 639 aa6.49□□□□□ -1.37
CCS1YMR038C STM1P39015 273 aaKnown RBP6.49□□□□□ -1.37
CCS1YMR038C RGD2P43556 714 aa6.49□□□□□ -1.37
CCS1YMR038C ITC1P53125 1264 aa6.49□□□□□ -1.37
CCS1YMR038C SYT1Q06836 1226 aa6.49□□□□□ -1.37
CCS1YMR038C YDR461C-AQ2V2P7 80 aa6.49□□□□□ -1.37
CCS1YMR038C YRF1-3P0CX14 1859 aa6.48□□□□□ -1.37
CCS1YMR038C YRF1-7P0CX15 1859 aa6.48□□□□□ -1.37
CCS1YMR038C YRF1-6P53819 1859 aa6.48□□□□□ -1.37
CCS1YMR038C ISW1P38144 1129 aa6.48□□□□□ -1.37
CCS1YMR038C MSC7P38694 644 aa6.48□□□□□ -1.37
CCS1YMR038C CEM1P39525 442 aa6.48□□□□□ -1.37
CCS1YMR038C SAP155P43612 1002 aa6.48□□□□□ -1.37
CCS1YMR038C ADE12P80210 433 aaKnown RBP6.48□□□□□ -1.37
CCS1YMR038C TRS120Q04183 1289 aa6.48□□□□□ -1.37
CCS1YMR038C MNL2Q12205 849 aa6.48□□□□□ -1.37
CCS1YMR038C RSF2P46974 1380 aa6.47□□□□□ -1.37
CCS1YMR038C SMC1P32908 1225 aa6.47□□□□□ -1.37
CCS1YMR038C ESL2P36168 1195 aa6.47□□□□□ -1.37
CCS1YMR038C APM2P38700 605 aa6.47□□□□□ -1.37
CCS1YMR038C NTA1P40354 457 aa6.47□□□□□ -1.37
CCS1YMR038C UFD2P54860 961 aa6.47□□□□□ -1.37
CCS1YMR038C MSC6Q08818 692 aaKnown RBP6.47□□□□□ -1.37
CCS1YMR038C ADE6P38972 1358 aaKnown RBP6.46□□□□□ -1.37
CCS1YMR038C EAF6P47128 113 aa6.46□□□□□ -1.38
CCS1YMR038C HPF1Q05164 967 aa6.46□□□□□ -1.38
CCS1YMR038C GPI13Q07830 1017 aa6.46□□□□□ -1.38
CCS1YMR038C SLM3Q12093 417 aa6.46□□□□□ -1.38
CCS1YMR038C FPS1P23900 669 aa6.45□□□□□ -1.38
CCS1YMR038C SLD2P34252 453 aa6.45□□□□□ -1.38
CCS1YMR038C NCL1P38205 684 aaKnown RBP6.45□□□□□ -1.38
CCS1YMR038C RAD55P38953 406 aa6.45□□□□□ -1.38
CCS1YMR038C FIR1P40020 876 aa6.45□□□□□ -1.38
CCS1YMR038C LYS5P50113 272 aa6.45□□□□□ -1.38
CCS1YMR038C TY1A-DR2Q03964 440 aaKnown RBP6.45□□□□□ -1.38
CCS1YMR038C TIF6Q12522 245 aaKnown RBP6.45□□□□□ -1.38
CCS1YMR038C YRF1-4O13559 1382 aa6.44□□□□□ -1.38
CCS1YMR038C YIL177CP40434 1758 aa6.44□□□□□ -1.38
CCS1YMR038C YJL225CP40889 1758 aa6.44□□□□□ -1.38
CCS1YMR038C RPP1AP05318 106 aaPredicted RBP6.44□□□□□ -1.38
CCS1YMR038C YKR075CP36155 307 aa6.44□□□□□ -1.38
CCS1YMR038C PPX1P38698 397 aa6.44□□□□□ -1.38
CCS1YMR038C SQS1P53866 767 aaKnown RBP6.44□□□□□ -1.38
CCS1YMR038C YPL062WQ02781 134 aa6.44□□□□□ -1.38
CCS1YMR038C EMG1Q06287 252 aaKnown RBP6.44□□□□□ -1.38
CCS1YMR038C WHI5Q12416 295 aa6.44□□□□□ -1.38
CCS1YMR038C IRS4P36115 615 aaKnown RBP6.43□□□□□ -1.38
CCS1YMR038C PSY2P40164 858 aa6.43□□□□□ -1.38
CCS1YMR038C YIL165CP40446 119 aa6.43□□□□□ -1.38
CCS1YMR038C JJJ3P47138 172 aa6.43□□□□□ -1.38
CCS1YMR038C IDI1P15496 288 aa6.42□□□□□ -1.38
CCS1YMR038C SEC20P28791 383 aa6.42□□□□□ -1.38
CCS1YMR038C YER156CP40093 338 aaKnown RBP6.42□□□□□ -1.38
CCS1YMR038C XKS1P42826 600 aa6.42□□□□□ -1.38
CCS1YMR038C RSC4Q02206 625 aa6.42□□□□□ -1.38
CCS1YMR038C HEH2Q03281 663 aa6.42□□□□□ -1.38
CCS1YMR038C CHZ1P40019 153 aaPredicted RBP6.41□□□□□ -1.38
CCS1YMR038C YGR035CP53222 116 aa6.41□□□□□ -1.38
CCS1YMR038C CTT1P06115 562 aa6.4□□□□□ -1.38
CCS1YMR038C RPS24AP0CX31 135 aaKnown RBP6.4□□□□□ -1.38
CCS1YMR038C RPS24BP0CX32 135 aaKnown RBP6.4□□□□□ -1.38
CCS1YMR038C SPE2P21182 396 aa6.4□□□□□ -1.38
CCS1YMR038C MET4P32389 672 aa6.4□□□□□ -1.38
CCS1YMR038C AIM46P38885 310 aa6.4□□□□□ -1.38
CCS1YMR038C PRK1P40494 810 aa6.4□□□□□ -1.38
CCS1YMR038C YNL011CP53980 444 aa6.4□□□□□ -1.38
CCS1YMR038C CDC55Q00362 526 aa6.4□□□□□ -1.38
CCS1YMR038C BUG1Q12191 341 aa6.4□□□□□ -1.38
CCS1YMR038C YBR287WP38355 427 aa6.39□□□□□ -1.39
CCS1YMR038C RRT14P40470 206 aa6.39□□□□□ -1.39
CCS1YMR038C DPH6Q12429 685 aa6.39□□□□□ -1.39
CCS1YMR038C APC1P53886 1748 aa6.39□□□□□ -1.39
CCS1YMR038C MRP10O75012 95 aa6.38□□□□□ -1.39
CCS1YMR038C GPM1P00950 247 aaKnown RBP6.38□□□□□ -1.39
CCS1YMR038C KIP3P53086 805 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms