RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	SKP2	P42843	763 aa		11.4	□□□□□ -0.58
SAM1	YLR180W	SOL4	P53315	255 aa		11.4	□□□□□ -0.58
SAM1	YLR180W	SKG3	Q06315	1026 aa		11.4	□□□□□ -0.58
SAM1	YLR180W	YHR131C	P38835	850 aa		11.39	□□□□□ -0.59
SAM1	YLR180W	YIR014W	P40570	242 aa		11.39	□□□□□ -0.59
SAM1	YLR180W	IOC3	P43596	787 aa		11.39	□□□□□ -0.59
SAM1	YLR180W	IRC8	P47046	822 aa		11.39	□□□□□ -0.59
SAM1	YLR180W	LDB19	Q12502	818 aa		11.39	□□□□□ -0.59
SAM1	YLR180W	KTR3	P38130	404 aa	Predicted RBP	11.38	□□□□□ -0.59
SAM1	YLR180W	PTK2	P47116	818 aa	Known RBP	11.38	□□□□□ -0.59
SAM1	YLR180W	YGL242C	P53066	181 aa		11.38	□□□□□ -0.59
SAM1	YLR180W	MSC6	Q08818	692 aa	Known RBP	11.38	□□□□□ -0.59
SAM1	YLR180W	YDR524C-B	Q3E6R4	66 aa		11.38	□□□□□ -0.59
SAM1	YLR180W	ECM29	P38737	1868 aa		11.38	□□□□□ -0.59
SAM1	YLR180W	PDC1	P06169	563 aa	Known RBP	11.37	□□□□□ -0.59
SAM1	YLR180W	RAD18	P10862	487 aa		11.37	□□□□□ -0.59
SAM1	YLR180W	IRE1	P32361	1115 aa		11.37	□□□□□ -0.59
SAM1	YLR180W	RAD50	P12753	1312 aa		11.36	□□□□□ -0.59
SAM1	YLR180W	YMR147W	P40218	223 aa	Known RBP	11.36	□□□□□ -0.59
SAM1	YLR180W	CHS3	P29465	1165 aa		11.35	□□□□□ -0.59
SAM1	YLR180W	VPS53	P47061	822 aa		11.35	□□□□□ -0.59
SAM1	YLR180W	SLD5	Q03406	294 aa		11.35	□□□□□ -0.59
SAM1	YLR180W	CDC16	P09798	840 aa		11.34	□□□□□ -0.59
SAM1	YLR180W	SAM1	P10659	382 aa	Known RBP	11.34	□□□□□ -0.59
SAM1	YLR180W	SAM2	P19358	384 aa	Known RBP	11.34	□□□□□ -0.59
SAM1	YLR180W	VPS29	P38759	282 aa		11.34	□□□□□ -0.59
SAM1	YLR180W	ENP2	P48234	707 aa	Known RBP	11.34	□□□□□ -0.59
SAM1	YLR180W	NKP2	Q06162	153 aa		11.34	□□□□□ -0.59
SAM1	YLR180W	YUR1	P26725	428 aa		11.33	□□□□□ -0.6
SAM1	YLR180W	RTS1	P38903	757 aa		11.33	□□□□□ -0.6
SAM1	YLR180W	VID27	P40157	782 aa		11.33	□□□□□ -0.6
SAM1	YLR180W	DAK1	P54838	584 aa	Known RBP	11.33	□□□□□ -0.6
SAM1	YLR180W	GPT2	P36148	743 aa		11.32	□□□□□ -0.6
SAM1	YLR180W	PHO88	P38264	188 aa	Predicted RBP	11.32	□□□□□ -0.6
SAM1	YLR180W	RFC1	P38630	861 aa	Known RBP	11.32	□□□□□ -0.6
SAM1	YLR180W	MCM6	P53091	1017 aa	Known RBP	11.32	□□□□□ -0.6
SAM1	YLR180W	MLC1	P53141	149 aa		11.32	□□□□□ -0.6
SAM1	YLR180W	MRD1	Q06106	887 aa	Known RBP	11.32	□□□□□ -0.6
SAM1	YLR180W	CSC1	Q06538	782 aa		11.32	□□□□□ -0.6
SAM1	YLR180W	RTP1	Q12751	981 aa		11.32	□□□□□ -0.6
SAM1	YLR180W	YDR461C-A	Q2V2P7	80 aa		11.32	□□□□□ -0.6
SAM1	YLR180W	POX1	P13711	748 aa		11.31	□□□□□ -0.6
SAM1	YLR180W	YHL050C	P38721	697 aa		11.31	□□□□□ -0.6
SAM1	YLR180W	JHD1	P40034	492 aa		11.31	□□□□□ -0.6
SAM1	YLR180W	EPS1	P40557	701 aa		11.31	□□□□□ -0.6
SAM1	YLR180W	RSC8	P43609	557 aa	Known RBP	11.31	□□□□□ -0.6
SAM1	YLR180W	FOL2	P51601	243 aa	Known RBP	11.31	□□□□□ -0.6
SAM1	YLR180W	ALO1	P54783	526 aa	Known RBP	11.31	□□□□□ -0.6
SAM1	YLR180W	KAR5	Q04746	504 aa		11.31	□□□□□ -0.6
SAM1	YLR180W	RAD61	Q99359	647 aa		11.31	□□□□□ -0.6
SAM1	YLR180W	MCM4	P30665	933 aa	Known RBP	11.3	□□□□□ -0.6
SAM1	YLR180W	SHP1	P34223	423 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	PBY1	P38254	753 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	UBP9	P39967	754 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	SCS3	P53012	380 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	YGL039W	P53183	348 aa	Known RBP	11.3	□□□□□ -0.6
SAM1	YLR180W	TFC8	Q12308	588 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	LAM4	P38800	1345 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	PDR18	P53756	1333 aa		11.3	□□□□□ -0.6
SAM1	YLR180W	NOT3	P06102	836 aa	Known RBP	11.29	□□□□□ -0.6
SAM1	YLR180W	TGL1	P34163	548 aa		11.29	□□□□□ -0.6
SAM1	YLR180W	VPS8	P39702	1274 aa		11.29	□□□□□ -0.6
SAM1	YLR180W	SLN1	P39928	1220 aa	Predicted RBP	11.29	□□□□□ -0.6
SAM1	YLR180W	YNR014W	P53719	212 aa		11.29	□□□□□ -0.6
SAM1	YLR180W	ERP3	Q12403	225 aa		11.29	□□□□□ -0.6
SAM1	YLR180W	TIM23	P32897	222 aa		11.28	□□□□□ -0.6
SAM1	YLR180W	TMA64	Q04600	565 aa	Known RBP	11.28	□□□□□ -0.6
SAM1	YLR180W	DUS3	Q06053	668 aa	Known RBP	11.28	□□□□□ -0.6
SAM1	YLR180W	ACE2	P21192	770 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
SAM1	YLR180W	TFC4	P33339	1025 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	OPY1	P38271	328 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	STM1	P39015	273 aa	Known RBP	11.27	□□□□□ -0.61
SAM1	YLR180W	BDP1	P46678	594 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	VPS72	Q03388	795 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	SPH1	Q06160	661 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	TRM11	Q12463	433 aa		11.27	□□□□□ -0.61
SAM1	YLR180W	RRP8	P38961	392 aa	Known RBP	11.26	□□□□□ -0.61
SAM1	YLR180W	ISA1	Q07821	250 aa	Predicted RBP	11.26	□□□□□ -0.61
SAM1	YLR180W	ISW2	Q08773	1120 aa		11.26	□□□□□ -0.61
SAM1	YLR180W	COQ1	P18900	473 aa		11.25	□□□□□ -0.61
SAM1	YLR180W	MCR1	P36060	302 aa	Known RBP	11.25	□□□□□ -0.61
SAM1	YLR180W	GCR2	Q01722	534 aa		11.25	□□□□□ -0.61
SAM1	YLR180W	UBR2	Q07963	1872 aa		11.24	□□□□□ -0.61
SAM1	YLR180W	TKL1	P23254	680 aa	Known RBP	11.24	□□□□□ -0.61
SAM1	YLR180W	SEC8	P32855	1065 aa		11.24	□□□□□ -0.61
SAM1	YLR180W	DBP7	P36120	742 aa	Known RBP	11.24	□□□□□ -0.61
SAM1	YLR180W	ECM21	P38167	1117 aa	Known RBP	11.24	□□□□□ -0.61
SAM1	YLR180W	PES4	P39684	611 aa		11.24	□□□□□ -0.61
SAM1	YLR180W	YNL115C	P53925	644 aa		11.24	□□□□□ -0.61
SAM1	YLR180W	YMR321C	Q04898	105 aa		11.24	□□□□□ -0.61
SAM1	YLR180W	TAH18	Q12181	623 aa		11.24	□□□□□ -0.61
SAM1	YLR180W	SGM1	P47166	707 aa		11.23	□□□□□ -0.61
SAM1	YLR180W	PRO3	P32263	286 aa	Known RBP	11.22	□□□□□ -0.61
SAM1	YLR180W	REG2	P38232	338 aa		11.22	□□□□□ -0.61
SAM1	YLR180W	OSH3	P38713	996 aa	Known RBP	11.22	□□□□□ -0.61
SAM1	YLR180W	BBC1	P47068	1157 aa		11.22	□□□□□ -0.61
SAM1	YLR180W	PIB2	P53191	635 aa		11.22	□□□□□ -0.61
SAM1	YLR180W	CHO2	P05374	869 aa	Known RBP	11.21	□□□□□ -0.61
SAM1	YLR180W	SNA3	P14359	133 aa		11.21	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 142.4 ms