RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeastyeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCS1YKL017C PEX7P39108 375 aa3.67□□□□□ -1.82
HCS1YKL017C EAR1Q03212 550 aa3.67□□□□□ -1.82
HCS1YKL017C RIM11P38615 370 aa3.66□□□□□ -1.82
HCS1YKL017C YVC1Q12324 675 aa3.66□□□□□ -1.82
HCS1YKL017C LPX1Q12405 387 aaKnown RBP3.66□□□□□ -1.82
HCS1YKL017C FUR4P05316 633 aaKnown RBP3.66□□□□□ -1.82
HCS1YKL017C PRP5P21372 849 aaPredicted RBP3.66□□□□□ -1.82
HCS1YKL017C GIS1Q03833 894 aa3.66□□□□□ -1.82
HCS1YKL017C CMR1Q12510 522 aaKnown RBP3.66□□□□□ -1.82
HCS1YKL017C COBP00163 385 aa3.65□□□□□ -1.83
HCS1YKL017C UTP22P53254 1237 aaPredicted RBP3.65□□□□□ -1.83
HCS1YKL017C ALG6Q12001 544 aaKnown RBP3.65□□□□□ -1.83
HCS1YKL017C SSA4P22202 642 aaKnown RBP3.64□□□□□ -1.83
HCS1YKL017C PRO1P32264 428 aa3.64□□□□□ -1.83
HCS1YKL017C REI1P38344 393 aaPredicted RBP3.64□□□□□ -1.83
HCS1YKL017C DMA2P53924 522 aa3.64□□□□□ -1.83
HCS1YKL017C DUR3P33413 735 aa3.64□□□□□ -1.83
HCS1YKL017C AIM3P38266 947 aaKnown RBP3.64□□□□□ -1.83
HCS1YKL017C NFS1P25374 497 aa3.63□□□□□ -1.83
HCS1YKL017C ECM2P38241 364 aaKnown RBP3.63□□□□□ -1.83
HCS1YKL017C BOL3P39724 118 aa3.63□□□□□ -1.83
HCS1YKL017C RSC4Q02206 625 aa3.63□□□□□ -1.83
HCS1YKL017C LEO1P38439 464 aa3.63□□□□□ -1.83
HCS1YKL017C MRPL22P53881 309 aa3.63□□□□□ -1.83
HCS1YKL017C SMY2P32909 740 aaKnown RBP3.62□□□□□ -1.83
HCS1YKL017C PTC7P38797 343 aa3.62□□□□□ -1.83
HCS1YKL017C RIM8P53179 542 aa3.62□□□□□ -1.83
HCS1YKL017C YGR045CP53229 120 aa3.62□□□□□ -1.83
HCS1YKL017C ELA1P53861 379 aaPredicted RBP3.61□□□□□ -1.83
HCS1YKL017C YDL177CQ12257 170 aa3.61□□□□□ -1.83
HCS1YKL017C NNK1P36003 928 aa3.61□□□□□ -1.83
HCS1YKL017C ARL1P38116 183 aaKnown RBP3.59□□□□□ -1.83
HCS1YKL017C GTS1P40956 396 aa3.59□□□□□ -1.83
HCS1YKL017C UFD2P54860 961 aa3.59□□□□□ -1.83
HCS1YKL017C AVO1Q08236 1176 aa3.59□□□□□ -1.83
HCS1YKL017C SAP155P43612 1002 aa3.59□□□□□ -1.83
HCS1YKL017C GSF2Q04697 403 aaKnown RBP3.59□□□□□ -1.83
HCS1YKL017C SOD2P00447 233 aa3.58□□□□□ -1.84
HCS1YKL017C TOD6P34219 525 aa3.58□□□□□ -1.84
HCS1YKL017C ETP1P38748 585 aaKnown RBP3.58□□□□□ -1.84
HCS1YKL017C PUS7Q08647 676 aaKnown RBP3.58□□□□□ -1.84
HCS1YKL017C YPL277CQ08989 487 aa3.58□□□□□ -1.84
HCS1YKL017C TY1A-LR4P0C2I8 440 aaKnown RBP3.56□□□□□ -1.84
HCS1YKL017C TY1A-DR6P0CX70 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-ER1P0CX71 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-LR2P0CX72 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-PLP0CX73 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-JR1P0CX74 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-LR3P0CX75 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-ML2P0CX76 440 aa3.56□□□□□ -1.84
HCS1YKL017C YNL011CP53980 444 aa3.56□□□□□ -1.84
HCS1YKL017C PMT7Q06644 662 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-GR1Q12085 440 aa3.56□□□□□ -1.84
HCS1YKL017C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.56□□□□□ -1.84
HCS1YKL017C TY1A-OLQ92392 440 aaKnown RBP3.56□□□□□ -1.84
HCS1YKL017C FLP1P03870 423 aa3.56□□□□□ -1.84
HCS1YKL017C GLO3P38682 493 aaKnown RBP3.56□□□□□ -1.84
HCS1YKL017C NUT1P53114 1132 aa3.56□□□□□ -1.84
HCS1YKL017C YAF9P53930 226 aa3.56□□□□□ -1.84
HCS1YKL017C TPP1Q03796 238 aa3.56□□□□□ -1.84
HCS1YKL017C RPS13P05756 151 aaKnown RBP3.55□□□□□ -1.84
HCS1YKL017C ABZ1P37254 787 aaPredicted RBP3.55□□□□□ -1.84
HCS1YKL017C QDR1P40475 563 aa3.55□□□□□ -1.84
HCS1YKL017C YKL077WP36081 392 aa3.54□□□□□ -1.84
HCS1YKL017C FOL2P51601 243 aaKnown RBP3.54□□□□□ -1.84
HCS1YKL017C SNO2P53823 222 aa3.54□□□□□ -1.84
HCS1YKL017C CLU1Q03690 1277 aaKnown RBP3.54□□□□□ -1.84
HCS1YKL017C BSC2Q05611 235 aa3.54□□□□□ -1.84
HCS1YKL017C YLR358CO13565 187 aa3.53□□□□□ -1.84
HCS1YKL017C SAM35P14693 329 aa3.53□□□□□ -1.84
HCS1YKL017C MCM5P29496 775 aaKnown RBP3.53□□□□□ -1.84
HCS1YKL017C SLS1P42900 643 aa3.53□□□□□ -1.84
HCS1YKL017C MNL2Q12205 849 aa3.53□□□□□ -1.84
HCS1YKL017C RVS167P39743 482 aaKnown RBP3.53□□□□□ -1.84
HCS1YKL017C SHM2P37291 469 aaKnown RBP3.52□□□□□ -1.85
HCS1YKL017C EXO5P38289 585 aa3.52□□□□□ -1.85
HCS1YKL017C YHL012WP38709 493 aa3.52□□□□□ -1.85
HCS1YKL017C CDC55Q00362 526 aa3.52□□□□□ -1.85
HCS1YKL017C KAR5Q04746 504 aa3.52□□□□□ -1.85
HCS1YKL017C TAD3Q9URQ3 322 aa3.52□□□□□ -1.85
HCS1YKL017C PRE10P21242 288 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
HCS1YKL017C RET1P22276 1149 aaKnown RBP3.51□□□□□ -1.85
HCS1YKL017C MDL2P33311 773 aa3.51□□□□□ -1.85
HCS1YKL017C YAR028WP39548 234 aa3.51□□□□□ -1.85
HCS1YKL017C ACF4P47129 309 aa3.51□□□□□ -1.85
HCS1YKL017C TRS120Q04183 1289 aa3.51□□□□□ -1.85
HCS1YKL017C YLR257WQ06146 321 aaKnown RBP3.51□□□□□ -1.85
HCS1YKL017C TUB2P02557 457 aaKnown RBP3.51□□□□□ -1.85
HCS1YKL017C NMD3P38861 518 aaKnown RBP3.51□□□□□ -1.85
HCS1YKL017C ATG1P53104 897 aa3.51□□□□□ -1.85
HCS1YKL017C CTS1P29029 562 aa3.5□□□□□ -1.85
HCS1YKL017C NEM1P38757 446 aa3.5□□□□□ -1.85
HCS1YKL017C SHU2P38957 223 aa3.5□□□□□ -1.85
HCS1YKL017C INP54Q08227 384 aaKnown RBP3.5□□□□□ -1.85
HCS1YKL017C PNS1Q12412 539 aa3.5□□□□□ -1.85
HCS1YKL017C MON1P53129 644 aa3.5□□□□□ -1.85
HCS1YKL017C SRO9P25567 434 aaKnown RBP3.49□□□□□ -1.85
HCS1YKL017C AIM26P32858 118 aa3.48□□□□□ -1.85
HCS1YKL017C MTR4P47047 1073 aaKnown RBP3.48□□□□□ -1.85
HCS1YKL017C RSA3Q05942 220 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms