RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	BDH2	P39713	417 aa		11.46	□□□□□ -0.57
TIR3	YIL011W	HST1	P53685	503 aa		11.46	□□□□□ -0.57
TIR3	YIL011W	COG8	Q04632	607 aa		11.46	□□□□□ -0.57
TIR3	YIL011W	SKG3	Q06315	1026 aa		11.46	□□□□□ -0.57
TIR3	YIL011W	ISW2	Q08773	1120 aa		11.46	□□□□□ -0.57
TIR3	YIL011W	LAP2	Q10740	671 aa		11.46	□□□□□ -0.57
TIR3	YIL011W	CLF1	Q12309	687 aa	Predicted RBP	11.46	□□□□□ -0.57
TIR3	YIL011W	TUB2	P02557	457 aa	Known RBP	11.45	□□□□□ -0.58
TIR3	YIL011W	RNR3	P21672	869 aa	Known RBP	11.45	□□□□□ -0.58
TIR3	YIL011W	SPT21	P35209	758 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	RFC5	P38251	354 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	PES4	P39684	611 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	VHR2	P40041	505 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	PEA2	P40091	420 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	FOL1	P53848	824 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	VPS30	Q02948	557 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	CWC15	Q03772	175 aa	Known RBP	11.45	□□□□□ -0.58
TIR3	YIL011W	YPL150W	Q12152	901 aa		11.45	□□□□□ -0.58
TIR3	YIL011W	HSP82	P02829	709 aa	Known RBP	11.44	□□□□□ -0.58
TIR3	YIL011W	MSP1	P28737	362 aa		11.44	□□□□□ -0.58
TIR3	YIL011W	CSR2	Q12734	1121 aa		11.44	□□□□□ -0.58
TIR3	YIL011W	SWI4	P25302	1093 aa	Known RBP	11.43	□□□□□ -0.58
TIR3	YIL011W	PEX21	P50091	288 aa		11.43	□□□□□ -0.58
TIR3	YIL011W	GDE1	Q02979	1223 aa		11.43	□□□□□ -0.58
TIR3	YIL011W	CIT1	P00890	479 aa		11.42	□□□□□ -0.58
TIR3	YIL011W	CBP3	P21560	335 aa		11.42	□□□□□ -0.58
TIR3	YIL011W	RXT2	P38255	430 aa		11.42	□□□□□ -0.58
TIR3	YIL011W	VPS45	P38932	577 aa		11.42	□□□□□ -0.58
TIR3	YIL011W	PIL1	P53252	339 aa	Known RBP	11.42	□□□□□ -0.58
TIR3	YIL011W	YDR341C	Q05506	607 aa	Known RBP	11.42	□□□□□ -0.58
TIR3	YIL011W	PEX19	Q07418	342 aa		11.42	□□□□□ -0.58
TIR3	YIL011W	NUC1	P08466	329 aa		11.41	□□□□□ -0.58
TIR3	YIL011W	SAM2	P19358	384 aa	Known RBP	11.41	□□□□□ -0.58
TIR3	YIL011W	ACA1	P39970	489 aa		11.41	□□□□□ -0.58
TIR3	YIL011W	MET6	P05694	767 aa	Known RBP	11.4	□□□□□ -0.58
TIR3	YIL011W	RDS1	P25611	832 aa		11.4	□□□□□ -0.58
TIR3	YIL011W	MAL33	P38157	468 aa		11.4	□□□□□ -0.58
TIR3	YIL011W	TOM71	P38825	639 aa	Known RBP	11.4	□□□□□ -0.58
TIR3	YIL011W	SNF7	P39929	240 aa	Known RBP	11.4	□□□□□ -0.58
TIR3	YIL011W	UBP9	P39967	754 aa		11.4	□□□□□ -0.58
TIR3	YIL011W	HYR1	P40581	163 aa	Known RBP	11.4	□□□□□ -0.58
TIR3	YIL011W	MDM1	Q01846	1127 aa		11.4	□□□□□ -0.58
TIR3	YIL011W	HAP5	Q02516	242 aa		11.4	□□□□□ -0.58
TIR3	YIL011W	TUS1	Q06412	1307 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	ERG12	P07277	443 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	KEX1	P09620	729 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	PGI1	P12709	554 aa	Known RBP	11.39	□□□□□ -0.59
TIR3	YIL011W	ROX1	P25042	368 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	PCI8	P40512	444 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	DSE3	Q08729	430 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	GIN4	Q12263	1142 aa		11.39	□□□□□ -0.59
TIR3	YIL011W	SRP54	P20424	541 aa	Known RBP	11.38	□□□□□ -0.59
TIR3	YIL011W	SEC20	P28791	383 aa		11.38	□□□□□ -0.59
TIR3	YIL011W	TIF4631	P39935	952 aa	Known RBP	11.38	□□□□□ -0.59
TIR3	YIL011W	KRS1	P15180	591 aa	Known RBP	11.37	□□□□□ -0.59
TIR3	YIL011W	SSA4	P22202	642 aa	Known RBP	11.37	□□□□□ -0.59
TIR3	YIL011W	SPB4	P25808	606 aa	Predicted RBP	11.37	□□□□□ -0.59
TIR3	YIL011W	ASF1	P32447	279 aa		11.37	□□□□□ -0.59
TIR3	YIL011W	TPM2	P40414	161 aa		11.37	□□□□□ -0.59
TIR3	YIL011W	LSB1	P53281	241 aa		11.37	□□□□□ -0.59
TIR3	YIL011W	NAF1	P53919	492 aa	Known RBP	11.37	□□□□□ -0.59
TIR3	YIL011W	CEX1	Q12453	761 aa		11.37	□□□□□ -0.59
TIR3	YIL011W	NBL1	Q3E7Y6	73 aa		11.37	□□□□□ -0.59
TIR3	YIL011W	CDC6	P09119	513 aa		11.36	□□□□□ -0.59
TIR3	YIL011W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.36	□□□□□ -0.59	not detected
TIR3	YIL011W	ARL1	P38116	183 aa	Known RBP	11.36	□□□□□ -0.59
TIR3	YIL011W	PNT1	P38969	423 aa		11.36	□□□□□ -0.59
TIR3	YIL011W	RSM25	P40496	264 aa		11.36	□□□□□ -0.59
TIR3	YIL011W	CIR1	P42940	261 aa		11.36	□□□□□ -0.59
TIR3	YIL011W	RRT6	P53117	311 aa	Predicted RBP	11.36	□□□□□ -0.59
TIR3	YIL011W	PEX29	Q03370	554 aa		11.36	□□□□□ -0.59
TIR3	YIL011W	GIS4	Q04233	774 aa		11.36	□□□□□ -0.59
TIR3	YIL011W	SUB2	Q07478	446 aa	Known RBP	11.36	□□□□□ -0.59
TIR3	YIL011W	GET3	Q12154	354 aa	Known RBP	11.36	□□□□□ -0.59
TIR3	YIL011W	RGP1	P16664	663 aa		11.35	□□□□□ -0.59
TIR3	YIL011W	MAK11	P20484	414 aa	Known RBP	11.35	□□□□□ -0.59
TIR3	YIL011W	VPS1	P21576	704 aa	Known RBP	11.35	□□□□□ -0.59
TIR3	YIL011W	CCT5	P40413	562 aa	Known RBP	11.35	□□□□□ -0.59
TIR3	YIL011W	YIL089W	P40500	205 aa		11.35	□□□□□ -0.59
TIR3	YIL011W	SOL4	P53315	255 aa		11.35	□□□□□ -0.59
TIR3	YIL011W	FAR11	P53917	953 aa		11.35	□□□□□ -0.59
TIR3	YIL011W	CSC1	Q06538	782 aa		11.35	□□□□□ -0.59
TIR3	YIL011W	VIP1	Q06685	1146 aa	Known RBP	11.35	□□□□□ -0.59
TIR3	YIL011W	DCS2	Q12123	353 aa		11.35	□□□□□ -0.59
TIR3	YIL011W	HXK1	P04806	485 aa	Known RBP	11.34	□□□□□ -0.59
TIR3	YIL011W	MBR1	P23493	339 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	OCT1	P35999	772 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	LYS14	P40971	790 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	YGL138C	P53122	345 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	SMD2	Q06217	110 aa	Known RBP	11.34	□□□□□ -0.59
TIR3	YIL011W	SUE1	Q06524	206 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	APC11	Q12157	165 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	AIM44	Q99299	758 aa		11.34	□□□□□ -0.59
TIR3	YIL011W	RPL8A	P17076	256 aa	Known RBP	11.33	□□□□□ -0.6
TIR3	YIL011W	PWP2	P25635	923 aa	Known RBP	11.33	□□□□□ -0.6
TIR3	YIL011W	SAS3	P34218	831 aa		11.33	□□□□□ -0.6
TIR3	YIL011W	CCT3	P39077	534 aa	Known RBP	11.33	□□□□□ -0.6
TIR3	YIL011W	UTP4	Q06679	776 aa	Known RBP	11.33	□□□□□ -0.6
TIR3	YIL011W	ETT1	Q08421	412 aa	Known RBP	11.33	□□□□□ -0.6
TIR3	YIL011W	FRS2	P15625	503 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms