RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W MRPL33P20084 86 aa4.25□□□□□ -1.73
BCD1YHR040W YDL144CQ07589 356 aa4.25□□□□□ -1.73
BCD1YHR040W KRE5P22023 1365 aa4.25□□□□□ -1.73
BCD1YHR040W RPP1AP05318 106 aaPredicted RBP4.24□□□□□ -1.73
BCD1YHR040W LEU1P07264 779 aaKnown RBP4.24□□□□□ -1.73
BCD1YHR040W KAP122P32767 1081 aa4.24□□□□□ -1.73
BCD1YHR040W MRPL16P38064 232 aa4.24□□□□□ -1.73
BCD1YHR040W GRS1P38088 690 aaKnown RBP4.24□□□□□ -1.73
BCD1YHR040W CEM1P39525 442 aa4.24□□□□□ -1.73
BCD1YHR040W QDR2P40474 542 aa4.24□□□□□ -1.73
BCD1YHR040W MDJ2P42834 146 aa4.24□□□□□ -1.73
BCD1YHR040W BUD27P43573 796 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
BCD1YHR040W ATG1P53104 897 aa4.24□□□□□ -1.73
BCD1YHR040W CUZ1P53899 274 aa4.24□□□□□ -1.73
BCD1YHR040W WHI5Q12416 295 aa4.24□□□□□ -1.73
BCD1YHR040W STB3Q12427 513 aa4.24□□□□□ -1.73
BCD1YHR040W YML133CQ03099 1374 aa4.24□□□□□ -1.73
BCD1YHR040W YLL067CQ07888 1374 aa4.24□□□□□ -1.73
BCD1YHR040W YLL066CQ99208 1374 aa4.24□□□□□ -1.73
BCD1YHR040W DIT1P21623 536 aa4.23□□□□□ -1.73
BCD1YHR040W LDH1P38139 375 aa4.23□□□□□ -1.73
BCD1YHR040W DYS1P38791 387 aa4.23□□□□□ -1.73
BCD1YHR040W RTR1P40084 226 aaPredicted RBP4.23□□□□□ -1.73
BCD1YHR040W YNR029CP53729 429 aaKnown RBP4.23□□□□□ -1.73
BCD1YHR040W KRE33P53914 1056 aaKnown RBP4.23□□□□□ -1.73
BCD1YHR040W RCM1P53972 490 aa4.23□□□□□ -1.73
BCD1YHR040W YDL176WQ12027 708 aa4.23□□□□□ -1.73
BCD1YHR040W DNF3Q12674 1656 aa4.22□□□□□ -1.73
BCD1YHR040W RGP1P16664 663 aa4.22□□□□□ -1.73
BCD1YHR040W VMA3P25515 160 aa4.22□□□□□ -1.73
BCD1YHR040W SEC8P32855 1065 aa4.22□□□□□ -1.73
BCD1YHR040W MGE1P38523 228 aa4.22□□□□□ -1.73
BCD1YHR040W GLO3P38682 493 aaKnown RBP4.22□□□□□ -1.73
BCD1YHR040W BOL3P39724 118 aa4.22□□□□□ -1.73
BCD1YHR040W YJR107WP47145 328 aa4.22□□□□□ -1.73
BCD1YHR040W PAP2P53632 584 aaKnown RBP4.22□□□□□ -1.73
BCD1YHR040W ADE12P80210 433 aaKnown RBP4.22□□□□□ -1.73
BCD1YHR040W OYE2Q03558 400 aaKnown RBP4.22□□□□□ -1.73
BCD1YHR040W YOL098CQ12496 1037 aa4.22□□□□□ -1.73
BCD1YHR040W CCP1P00431 361 aa4.21□□□□□ -1.74
BCD1YHR040W RAD2P07276 1031 aa4.21□□□□□ -1.74
BCD1YHR040W FPS1P23900 669 aa4.21□□□□□ -1.74
BCD1YHR040W NUG1P40010 520 aaKnown RBP4.21□□□□□ -1.74
BCD1YHR040W FIR1P40020 876 aa4.21□□□□□ -1.74
BCD1YHR040W THI12P42883 340 aa4.21□□□□□ -1.74
BCD1YHR040W THI5P43534 340 aa4.21□□□□□ -1.74
BCD1YHR040W THI11P47183 340 aa4.21□□□□□ -1.74
BCD1YHR040W LYS5P50113 272 aa4.21□□□□□ -1.74
BCD1YHR040W SUT1P53032 299 aaKnown RBP4.21□□□□□ -1.74
BCD1YHR040W YGR035CP53222 116 aa4.21□□□□□ -1.74
BCD1YHR040W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
BCD1YHR040W JIP5Q06214 492 aaPredicted RBP4.21□□□□□ -1.74
BCD1YHR040W MAG2Q06436 670 aaKnown RBP4.21□□□□□ -1.74
BCD1YHR040W THI13Q07748 340 aa4.21□□□□□ -1.74
BCD1YHR040W RVB2Q12464 471 aaKnown RBP4.21□□□□□ -1.74
BCD1YHR040W TY1B-NL2Q99337 1749 aaKnown RBP4.21□□□□□ -1.74
BCD1YHR040W YRF1-4O13559 1382 aa4.2□□□□□ -1.74
BCD1YHR040W YEF3P16521 1044 aaKnown RBP4.2□□□□□ -1.74
BCD1YHR040W YBR287WP38355 427 aa4.2□□□□□ -1.74
BCD1YHR040W QDR1P40475 563 aa4.2□□□□□ -1.74
BCD1YHR040W SPR3P41901 512 aa4.2□□□□□ -1.74
BCD1YHR040W ATG36P46983 293 aa4.2□□□□□ -1.74
BCD1YHR040W ACF4P47129 309 aa4.2□□□□□ -1.74
BCD1YHR040W PRP43P53131 767 aaKnown RBP4.2□□□□□ -1.74
BCD1YHR040W RTS3P53289 263 aa4.2□□□□□ -1.74
BCD1YHR040W RNH70P53331 553 aa4.2□□□□□ -1.74
BCD1YHR040W LSO1Q3E827 93 aa4.2□□□□□ -1.74
BCD1YHR040W RPO41P13433 1351 aaKnown RBP4.19□□□□□ -1.74
BCD1YHR040W PRD1P25375 712 aa4.19□□□□□ -1.74
BCD1YHR040W PPH3P32345 308 aa4.19□□□□□ -1.74
BCD1YHR040W RRP14P36080 434 aaKnown RBP4.19□□□□□ -1.74
BCD1YHR040W NCL1P38205 684 aaKnown RBP4.19□□□□□ -1.74
BCD1YHR040W HXT8P40886 569 aa4.19□□□□□ -1.74
BCD1YHR040W CUS1Q02554 436 aaPredicted RBP4.19□□□□□ -1.74
BCD1YHR040W HPF1Q05164 967 aa4.19□□□□□ -1.74
BCD1YHR040W NUT2Q06213 157 aa4.19□□□□□ -1.74
BCD1YHR040W YDR461C-AQ2V2P7 80 aa4.19□□□□□ -1.74
BCD1YHR040W SIR4P11978 1358 aa4.18□□□□□ -1.74
BCD1YHR040W ADE6P38972 1358 aaKnown RBP4.18□□□□□ -1.74
BCD1YHR040W RPC31P17890 251 aa4.18□□□□□ -1.74
BCD1YHR040W MET1P36150 593 aa4.18□□□□□ -1.74
BCD1YHR040W BOI1P38041 980 aaKnown RBP4.18□□□□□ -1.74
BCD1YHR040W ISW1P38144 1129 aa4.18□□□□□ -1.74
BCD1YHR040W GIP1P38229 639 aa4.18□□□□□ -1.74
BCD1YHR040W APM2P38700 605 aa4.18□□□□□ -1.74
BCD1YHR040W OSW7P43611 510 aa4.18□□□□□ -1.74
BCD1YHR040W MPP10P47083 593 aaKnown RBP4.18□□□□□ -1.74
BCD1YHR040W SYT1Q06836 1226 aa4.18□□□□□ -1.74
BCD1YHR040W DPH6Q12429 685 aa4.18□□□□□ -1.74
BCD1YHR040W MLP1Q02455 1875 aaKnown RBP4.18□□□□□ -1.74
BCD1YHR040W SUI2P20459 304 aaKnown RBP4.17□□□□□ -1.74
BCD1YHR040W RPB10P22139 70 aa4.17□□□□□ -1.74
BCD1YHR040W SMC1P32908 1225 aa4.17□□□□□ -1.74
BCD1YHR040W MAM1P40065 302 aa4.17□□□□□ -1.74
BCD1YHR040W YJL049WP47048 450 aa4.17□□□□□ -1.74
BCD1YHR040W SKP1P52286 194 aa4.17□□□□□ -1.74
BCD1YHR040W SUB1P54000 292 aaKnown RBP4.17□□□□□ -1.74
BCD1YHR040W CTF4Q01454 927 aa4.17□□□□□ -1.74
BCD1YHR040W ECM16Q04217 1267 aaKnown RBP4.17□□□□□ -1.74
BCD1YHR040W YOR296WQ08748 1289 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms