RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W GIN4Q12263 1142 aa7.86□□□□□ -1.15
NUP49YGL172W MAK11P20484 414 aaKnown RBP7.85□□□□□ -1.15
NUP49YGL172W ACE2P21192 770 aa7.85□□□□□ -1.15
NUP49YGL172W CHS3P29465 1165 aa7.85□□□□□ -1.15
NUP49YGL172W PCS60P38137 543 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
NUP49YGL172W SPO22P40511 975 aa7.85□□□□□ -1.15
NUP49YGL172W VID28P40547 921 aa7.85□□□□□ -1.15
NUP49YGL172W PTK2P47116 818 aaKnown RBP7.85□□□□□ -1.15
NUP49YGL172W EST2Q06163 884 aa7.84□□□□□ -1.15
NUP49YGL172W SKG3Q06315 1026 aa7.84□□□□□ -1.15
NUP49YGL172W KRS1P15180 591 aaKnown RBP7.83□□□□□ -1.16
NUP49YGL172W SIS2P36024 562 aa7.83□□□□□ -1.16
NUP49YGL172W TFC6Q06339 672 aa7.83□□□□□ -1.16
NUP49YGL172W MAM3Q12296 706 aa7.83□□□□□ -1.16
NUP49YGL172W RNR2P09938 399 aaKnown RBP7.82□□□□□ -1.16
NUP49YGL172W BSD2P38356 321 aa7.82□□□□□ -1.16
NUP49YGL172W ETP1P38748 585 aaKnown RBP7.82□□□□□ -1.16
NUP49YGL172W ARP5P53946 755 aa7.82□□□□□ -1.16
NUP49YGL172W HVG1P0CE11 249 aa7.81□□□□□ -1.16
NUP49YGL172W SAM2P19358 384 aaKnown RBP7.81□□□□□ -1.16
NUP49YGL172W MAK31P23059 88 aa7.81□□□□□ -1.16
NUP49YGL172W OCT1P35999 772 aa7.81□□□□□ -1.16
NUP49YGL172W GUA1P38625 525 aaKnown RBP7.81□□□□□ -1.16
NUP49YGL172W TIF4631P39935 952 aaKnown RBP7.81□□□□□ -1.16
NUP49YGL172W CSM2P40465 213 aa7.81□□□□□ -1.16
NUP49YGL172W RPT6Q01939 405 aaKnown RBP7.81□□□□□ -1.16
NUP49YGL172W VPS30Q02948 557 aa7.81□□□□□ -1.16
NUP49YGL172W FBP1P09201 348 aa7.8□□□□□ -1.16
NUP49YGL172W RPL8BP29453 256 aaKnown RBP7.8□□□□□ -1.16
NUP49YGL172W FBP26P32604 452 aa7.8□□□□□ -1.16
NUP49YGL172W FOL1P53848 824 aa7.8□□□□□ -1.16
NUP49YGL172W ERG12P07277 443 aa7.79□□□□□ -1.16
NUP49YGL172W YIR014WP40570 242 aa7.79□□□□□ -1.16
NUP49YGL172W MYO5Q04439 1219 aaKnown RBP7.79□□□□□ -1.16
NUP49YGL172W SUB2Q07478 446 aaKnown RBP7.79□□□□□ -1.16
NUP49YGL172W TUS1Q06412 1307 aa7.79□□□□□ -1.16
NUP49YGL172W DIT2P21595 489 aa7.78□□□□□ -1.16
NUP49YGL172W YDJ1P25491 409 aaKnown RBP7.78□□□□□ -1.16
NUP49YGL172W AKR1P39010 764 aa7.78□□□□□ -1.16
NUP49YGL172W LYS14P40971 790 aa7.78□□□□□ -1.16
NUP49YGL172W EPL1P43572 832 aa7.78□□□□□ -1.16
NUP49YGL172W ALG2P43636 503 aa7.78□□□□□ -1.16
NUP49YGL172W YKE2P52553 114 aa7.78□□□□□ -1.16
NUP49YGL172W ECM23Q02710 187 aa7.78□□□□□ -1.16
NUP49YGL172W JIP4Q03361 876 aa7.78□□□□□ -1.16
NUP49YGL172W RBA50Q04418 439 aa7.78□□□□□ -1.16
NUP49YGL172W YOR111WQ99210 232 aa7.78□□□□□ -1.16
NUP49YGL172W NUC1P08466 329 aa7.78□□□□□ -1.16
NUP49YGL172W MATALPHA2P0CY08 210 aa7.78□□□□□ -1.16
NUP49YGL172W HMLALPHA2P0CY09 210 aa7.78□□□□□ -1.16
NUP49YGL172W SRS2P12954 1174 aa7.78□□□□□ -1.16
NUP49YGL172W VPS45P38932 577 aa7.78□□□□□ -1.16
NUP49YGL172W YJL007CP47080 104 aa7.78□□□□□ -1.16
NUP49YGL172W ENT3P47160 408 aa7.78□□□□□ -1.16
NUP49YGL172W YML037CQ03703 340 aa7.78□□□□□ -1.16
NUP49YGL172W HCA4P20448 770 aaKnown RBP7.77□□□□□ -1.17
NUP49YGL172W MCD4P36051 919 aa7.77□□□□□ -1.17
NUP49YGL172W APE3P37302 537 aaKnown RBP7.77□□□□□ -1.17
NUP49YGL172W MAL31P38156 614 aa7.77□□□□□ -1.17
NUP49YGL172W PES4P39684 611 aa7.77□□□□□ -1.17
NUP49YGL172W VAB2P40003 282 aa7.77□□□□□ -1.17
NUP49YGL172W NUP42P49686 430 aaKnown RBP7.77□□□□□ -1.17
NUP49YGL172W CTF18P49956 741 aa7.77□□□□□ -1.17
NUP49YGL172W DUS1P53759 423 aaKnown RBP7.77□□□□□ -1.17
NUP49YGL172W CLF1Q12309 687 aaPredicted RBP7.77□□□□□ -1.17
NUP49YGL172W TIF6Q12522 245 aaKnown RBP7.77□□□□□ -1.17
NUP49YGL172W SRP54P20424 541 aaKnown RBP7.76□□□□□ -1.17
NUP49YGL172W RNR3P21672 869 aaKnown RBP7.76□□□□□ -1.17
NUP49YGL172W ASH1P34233 588 aa7.76□□□□□ -1.17
NUP49YGL172W RSC30P38781 883 aa7.76□□□□□ -1.17
NUP49YGL172W REF2P42073 533 aaPredicted RBP7.76□□□□□ -1.17
NUP49YGL172W NET1P47035 1189 aa7.76□□□□□ -1.17
NUP49YGL172W SOL4P53315 255 aa7.76□□□□□ -1.17
NUP49YGL172W MDM1Q01846 1127 aa7.76□□□□□ -1.17
NUP49YGL172W VPS20Q04272 221 aa7.76□□□□□ -1.17
NUP49YGL172W SUE1Q06524 206 aa7.76□□□□□ -1.17
NUP49YGL172W AIM44Q99299 758 aa7.76□□□□□ -1.17
NUP49YGL172W RPL19AP0CX82 189 aaKnown RBP7.75□□□□□ -1.17
NUP49YGL172W RPL19BP0CX83 189 aaPredicted RBP7.75□□□□□ -1.17
NUP49YGL172W PCT1P13259 424 aa7.75□□□□□ -1.17
NUP49YGL172W IXR1P33417 597 aa7.75□□□□□ -1.17
NUP49YGL172W UTP4Q06679 776 aaKnown RBP7.75□□□□□ -1.17
NUP49YGL172W UBX5Q06682 500 aa7.75□□□□□ -1.17
NUP49YGL172W CFT2Q12102 859 aaPredicted RBP7.75□□□□□ -1.17
NUP49YGL172W PER1P25625 357 aa7.74□□□□□ -1.17
NUP49YGL172W COQ8P27697 501 aa7.74□□□□□ -1.17
NUP49YGL172W MOT2P34909 587 aaKnown RBP7.74□□□□□ -1.17
NUP49YGL172W YHL017WP38745 532 aa7.74□□□□□ -1.17
NUP49YGL172W BUD6P41697 788 aa7.74□□□□□ -1.17
NUP49YGL172W NPA3P47122 385 aa7.74□□□□□ -1.17
NUP49YGL172W YML020WQ03722 664 aa7.74□□□□□ -1.17
NUP49YGL172W YOR238WQ08634 303 aa7.74□□□□□ -1.17
NUP49YGL172W CIT1P00890 479 aa7.73□□□□□ -1.17
NUP49YGL172W MET6P05694 767 aaKnown RBP7.73□□□□□ -1.17
NUP49YGL172W RAD18P10862 487 aa7.73□□□□□ -1.17
NUP49YGL172W SWI4P25302 1093 aaKnown RBP7.73□□□□□ -1.17
NUP49YGL172W BMH2P34730 273 aaKnown RBP7.73□□□□□ -1.17
NUP49YGL172W PHO88P38264 188 aaPredicted RBP7.73□□□□□ -1.17
NUP49YGL172W OPY1P38271 328 aa7.73□□□□□ -1.17
NUP49YGL172W ERG7P38604 731 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms