RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	CCP1	P00431	361 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	HSC82	P15108	705 aa	Known RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	ECM32	P32644	1121 aa	Known RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	PEX6	P33760	1030 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	SPC105	P53148	917 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	PEX29	Q03370	554 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	PKH1	Q03407	766 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	SRC1	Q03707	834 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	GRC3	Q07845	632 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	SST2	P11972	698 aa	Known RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	PRE9	P23638	258 aa	Known RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	MRF1	P30775	413 aa	Predicted RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	MEP1	P40260	492 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	HXT10	P43581	546 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	RSC1	P53236	928 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	ALO1	P54783	526 aa	Known RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	CTF4	Q01454	927 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	BUD20	Q08004	166 aa	Predicted RBP	4.87	□□□□□ -1.63
PTR3	YFR029W	REC8	Q12188	680 aa		4.87	□□□□□ -1.63
PTR3	YFR029W	TFC3	P34111	1160 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	ABZ1	P37254	787 aa	Predicted RBP	4.86	□□□□□ -1.63
PTR3	YFR029W	RGA1	P39083	1007 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	PEA2	P40091	420 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	MTR4	P47047	1073 aa	Known RBP	4.86	□□□□□ -1.63
PTR3	YFR029W	SAM37	P50110	327 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	CWH41	P53008	833 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	MAL11	P53048	616 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	TFB2	Q02939	513 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	VIP1	Q06685	1146 aa	Known RBP	4.86	□□□□□ -1.63
PTR3	YFR029W	RTP1	Q12751	981 aa		4.86	□□□□□ -1.63
PTR3	YFR029W	INH1	P01097	85 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	MRPL33	P20084	86 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	APL2	P36000	726 aa	Predicted RBP	4.85	□□□□□ -1.63
PTR3	YFR029W	ARH1	P48360	493 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	RTA1	P53047	317 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	YGR125W	P53273	1036 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	ATG20	Q07528	640 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	MOD5	P07884	428 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	PLC1	P32383	869 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	YBR071W	P38243	211 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	YBR184W	P38299	523 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	PIP2	P52960	996 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	YPQ2	Q06328	317 aa		4.85	□□□□□ -1.63
PTR3	YFR029W	NOC3	Q07896	663 aa	Predicted RBP	4.85	□□□□□ -1.63
PTR3	YFR029W	CYB2	P00175	591 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	GAL1	P04385	528 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	EUG1	P32474	517 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	PIC2	P40035	300 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	RRD1	P40454	393 aa	Known RBP	4.84	□□□□□ -1.63
PTR3	YFR029W	SUT1	P53032	299 aa	Known RBP	4.84	□□□□□ -1.63
PTR3	YFR029W	HOL1	P53389	586 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	MET14	Q02196	202 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	EEB1	Q02891	456 aa		4.84	□□□□□ -1.63
PTR3	YFR029W	IMH1	Q06704	911 aa	Known RBP	4.84	□□□□□ -1.63
PTR3	YFR029W	URA1	P28272	314 aa	Predicted RBP	4.84	□□□□□ -1.64
PTR3	YFR029W	UGA4	P32837	571 aa		4.84	□□□□□ -1.64
PTR3	YFR029W	GNP1	P48813	663 aa		4.84	□□□□□ -1.64
PTR3	YFR029W	SYH1	Q02875	849 aa	Known RBP	4.84	□□□□□ -1.64
PTR3	YFR029W	YPL109C	Q02981	657 aa		4.84	□□□□□ -1.64
PTR3	YFR029W	BSC2	Q05611	235 aa		4.84	□□□□□ -1.64
PTR3	YFR029W	PHM6	Q05637	104 aa		4.84	□□□□□ -1.64
PTR3	YFR029W	OXR1	Q08952	273 aa		4.84	□□□□□ -1.64
PTR3	YFR029W	RPL8B	P29453	256 aa	Known RBP	4.83	□□□□□ -1.64
PTR3	YFR029W	SSH4	P32343	579 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	GCD11	P32481	527 aa	Known RBP	4.83	□□□□□ -1.64
PTR3	YFR029W	NPL4	P33755	580 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	CIC1	P38779	376 aa	Known RBP	4.83	□□□□□ -1.64
PTR3	YFR029W	GPI8	P49018	411 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	UBA2	P52488	636 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	HOS2	P53096	452 aa	Predicted RBP	4.83	□□□□□ -1.64
PTR3	YFR029W	PEX14	P53112	341 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	SXM1	Q04175	944 aa	Known RBP	4.83	□□□□□ -1.64
PTR3	YFR029W	THI73	Q07904	523 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	MCD1	Q12158	566 aa		4.83	□□□□□ -1.64
PTR3	YFR029W	CDC31	P06704	161 aa	Known RBP	4.82	□□□□□ -1.64
PTR3	YFR029W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
PTR3	YFR029W	PPH3	P32345	308 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	TFC4	P33339	1025 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	BET3	P36149	193 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	YHL008C	P38750	627 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	APE4	P38821	490 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	ESL1	P40456	1118 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	RGD2	P43556	714 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	PFD1	P46988	109 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	HLJ1	P48353	224 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	YML131W	Q03102	365 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	DAL4	Q04895	635 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	GCR1	P07261	785 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	PRP40	P33203	583 aa	Known RBP	4.82	□□□□□ -1.64
PTR3	YFR029W	RRP8	P38961	392 aa	Known RBP	4.82	□□□□□ -1.64
PTR3	YFR029W	MRPS18	P42847	217 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	TAF1	P46677	1066 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	APP1	P53933	587 aa		4.82	□□□□□ -1.64
PTR3	YFR029W	VMA3	P25515	160 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	MCM5	P29496	775 aa	Known RBP	4.81	□□□□□ -1.64
PTR3	YFR029W	SFP1	P32432	683 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	MKK2	P32491	506 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	HXT8	P40886	569 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	YNL058C	P53947	316 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	CTR9	P89105	1077 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms