RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C ICP55P40051 511 aa7.22□□□□□ -1.25
CDC34YDR054C QDR1P40475 563 aa7.22□□□□□ -1.25
CDC34YDR054C ACF4P47129 309 aa7.22□□□□□ -1.25
CDC34YDR054C CWH41P53008 833 aa7.22□□□□□ -1.25
CDC34YDR054C RPT4P53549 437 aaKnown RBP7.22□□□□□ -1.25
CDC34YDR054C HXT17P53631 564 aa7.22□□□□□ -1.25
CDC34YDR054C GCR2Q01722 534 aa7.22□□□□□ -1.25
CDC34YDR054C BRE1Q07457 700 aaKnown RBP7.22□□□□□ -1.25
CDC34YDR054C WRS1Q12109 432 aaKnown RBP7.22□□□□□ -1.25
CDC34YDR054C POM152P39685 1337 aa7.22□□□□□ -1.25
CDC34YDR054C SPT2P06843 333 aaPredicted RBP7.21□□□□□ -1.26
CDC34YDR054C CLN2P20438 545 aa7.21□□□□□ -1.26
CDC34YDR054C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
CDC34YDR054C TPO2P53283 614 aa7.21□□□□□ -1.26
CDC34YDR054C ERO1Q03103 563 aa7.21□□□□□ -1.26
CDC34YDR054C SRC1Q03707 834 aa7.21□□□□□ -1.26
CDC34YDR054C PUN1Q06991 263 aa7.21□□□□□ -1.26
CDC34YDR054C RRI2Q12348 645 aa7.21□□□□□ -1.26
CDC34YDR054C HAP4P14064 554 aa7.2□□□□□ -1.26
CDC34YDR054C STI1P15705 589 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
CDC34YDR054C MET4P32389 672 aa7.2□□□□□ -1.26
CDC34YDR054C HAL5P38970 855 aaKnown RBP7.2□□□□□ -1.26
CDC34YDR054C ATG3P40344 310 aa7.2□□□□□ -1.26
CDC34YDR054C KIN4Q01919 800 aa7.2□□□□□ -1.26
CDC34YDR054C TFB4Q12004 338 aa7.2□□□□□ -1.26
CDC34YDR054C RIM20Q12033 661 aa7.2□□□□□ -1.26
CDC34YDR054C YOR131CQ12486 218 aa7.2□□□□□ -1.26
CDC34YDR054C FRT1Q99332 602 aa7.2□□□□□ -1.26
CDC34YDR054C SRS2P12954 1174 aa7.19□□□□□ -1.26
CDC34YDR054C ISF1P32488 338 aa7.19□□□□□ -1.26
CDC34YDR054C TPM2P40414 161 aa7.19□□□□□ -1.26
CDC34YDR054C FYV10P40492 516 aa7.19□□□□□ -1.26
CDC34YDR054C YIR042CP40586 236 aa7.19□□□□□ -1.26
CDC34YDR054C PEX21P50091 288 aa7.19□□□□□ -1.26
CDC34YDR054C YGL081WP53156 320 aa7.19□□□□□ -1.26
CDC34YDR054C IRC4Q03036 179 aa7.19□□□□□ -1.26
CDC34YDR054C VPS16Q03308 798 aa7.19□□□□□ -1.26
CDC34YDR054C RPN4Q03465 531 aa7.19□□□□□ -1.26
CDC34YDR054C YGR161W-CQ3E744 92 aa7.19□□□□□ -1.26
CDC34YDR054C TRM1P15565 570 aaKnown RBP7.18□□□□□ -1.26
CDC34YDR054C LCB1P25045 558 aaKnown RBP7.18□□□□□ -1.26
CDC34YDR054C KRE2P27809 442 aa7.18□□□□□ -1.26
CDC34YDR054C YKL222CP35995 705 aa7.18□□□□□ -1.26
CDC34YDR054C AAP1P37898 856 aaKnown RBP7.18□□□□□ -1.26
CDC34YDR054C PBY1P38254 753 aa7.18□□□□□ -1.26
CDC34YDR054C YMR147WP40218 223 aaKnown RBP7.18□□□□□ -1.26
CDC34YDR054C YIR014WP40570 242 aa7.18□□□□□ -1.26
CDC34YDR054C YAP5P40574 245 aa7.18□□□□□ -1.26
CDC34YDR054C SET4P42948 560 aa7.18□□□□□ -1.26
CDC34YDR054C EMP47P43555 445 aa7.18□□□□□ -1.26
CDC34YDR054C SAM3Q08986 587 aa7.18□□□□□ -1.26
CDC34YDR054C CDC53Q12018 815 aaKnown RBP7.18□□□□□ -1.26
CDC34YDR054C PIN2Q12057 282 aa7.18□□□□□ -1.26
CDC34YDR054C SSF2Q12153 453 aaPredicted RBP7.18□□□□□ -1.26
CDC34YDR054C MST1P07236 462 aa7.17□□□□□ -1.26
CDC34YDR054C RET1P22276 1149 aaKnown RBP7.17□□□□□ -1.26
CDC34YDR054C RPT3P33298 428 aaKnown RBP7.17□□□□□ -1.26
CDC34YDR054C OPY1P38271 328 aa7.17□□□□□ -1.26
CDC34YDR054C TOS4Q06266 489 aa7.17□□□□□ -1.26
CDC34YDR054C PMD1P32634 1753 aa7.17□□□□□ -1.26
CDC34YDR054C CTT1P06115 562 aa7.16□□□□□ -1.26
CDC34YDR054C ICL1P28240 557 aaPredicted RBP7.16□□□□□ -1.26
CDC34YDR054C PBP2P38151 413 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
CDC34YDR054C UBP9P39967 754 aa7.16□□□□□ -1.26
CDC34YDR054C YNL115CP53925 644 aa7.16□□□□□ -1.26
CDC34YDR054C INM2Q05533 292 aa7.16□□□□□ -1.26
CDC34YDR054C AI4P03878 556 aa7.15□□□□□ -1.26
CDC34YDR054C MIP1P15801 1254 aa7.15□□□□□ -1.26
CDC34YDR054C YER156CP40093 338 aaKnown RBP7.15□□□□□ -1.26
CDC34YDR054C GSM1P42950 618 aa7.15□□□□□ -1.26
CDC34YDR054C ROM1P53046 1155 aa7.15□□□□□ -1.26
CDC34YDR054C GAS5Q08193 484 aa7.15□□□□□ -1.26
CDC34YDR054C GRX6Q12438 231 aa7.15□□□□□ -1.26
CDC34YDR054C PIF1P07271 859 aa7.14□□□□□ -1.27
CDC34YDR054C MPH3P0CE00 602 aa7.14□□□□□ -1.27
CDC34YDR054C GRX7P38068 203 aa7.14□□□□□ -1.27
CDC34YDR054C LAM4P38800 1345 aa7.14□□□□□ -1.27
CDC34YDR054C ACS2P52910 683 aaKnown RBP7.14□□□□□ -1.27
CDC34YDR054C UTP14Q04500 899 aaKnown RBP7.14□□□□□ -1.27
CDC34YDR054C PCT1P13259 424 aa7.13□□□□□ -1.27
CDC34YDR054C MCM2P29469 868 aa7.13□□□□□ -1.27
CDC34YDR054C PEP7P32609 515 aa7.13□□□□□ -1.27
CDC34YDR054C RPT1P33299 467 aaKnown RBP7.13□□□□□ -1.27
CDC34YDR054C PTK1P36002 662 aaPredicted RBP7.13□□□□□ -1.27
CDC34YDR054C OSH3P38713 996 aaKnown RBP7.13□□□□□ -1.27
CDC34YDR054C MNN1P39106 762 aa7.13□□□□□ -1.27
CDC34YDR054C BUD6P41697 788 aa7.13□□□□□ -1.27
CDC34YDR054C PUS6P53294 404 aa7.13□□□□□ -1.27
CDC34YDR054C TBF1Q02457 562 aa7.13□□□□□ -1.27
CDC34YDR054C SPR28Q04921 423 aa7.13□□□□□ -1.27
CDC34YDR054C PGA3Q12746 312 aaKnown RBP7.13□□□□□ -1.27
CDC34YDR054C MET6P05694 767 aaKnown RBP7.12□□□□□ -1.27
CDC34YDR054C VAN1P23642 535 aa7.12□□□□□ -1.27
CDC34YDR054C DCW1P36091 449 aa7.12□□□□□ -1.27
CDC34YDR054C SPR3P41901 512 aa7.12□□□□□ -1.27
CDC34YDR054C YFH7P43591 353 aa7.12□□□□□ -1.27
CDC34YDR054C UBX2Q04228 584 aa7.12□□□□□ -1.27
CDC34YDR054C YOL036WQ08206 761 aa7.12□□□□□ -1.27
CDC34YDR054C FIG2P25653 1609 aa7.12□□□□□ -1.27
CDC34YDR054C OPI1P21957 404 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms