RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C CLU1Q03690 1277 aaKnown RBP6.17□□□□□ -1.42
YDR008CYDR008C YLL054CQ12244 843 aa6.17□□□□□ -1.42
YDR008CYDR008C PNS1Q12412 539 aa6.17□□□□□ -1.42
YDR008CYDR008C CTS1P29029 562 aa6.16□□□□□ -1.42
YDR008CYDR008C TTI1P36097 1038 aa6.16□□□□□ -1.42
YDR008CYDR008C GTS1P40956 396 aa6.16□□□□□ -1.42
YDR008CYDR008C RPS13P05756 151 aaKnown RBP6.14□□□□□ -1.43
YDR008CYDR008C RPB10P22139 70 aa6.14□□□□□ -1.43
YDR008CYDR008C IRS4P36115 615 aaKnown RBP6.14□□□□□ -1.43
YDR008CYDR008C YIG1Q08956 461 aa6.14□□□□□ -1.43
YDR008CYDR008C APC11Q12157 165 aa6.14□□□□□ -1.43
YDR008CYDR008C CTR9P89105 1077 aa6.12□□□□□ -1.43
YDR008CYDR008C SRS2P12954 1174 aa6.11□□□□□ -1.43
YDR008CYDR008C HTS1P07263 546 aaKnown RBP6.1□□□□□ -1.43
YDR008CYDR008C MEC3Q02574 474 aa6.1□□□□□ -1.43
YDR008CYDR008C PUF6Q04373 656 aaKnown RBP6.1□□□□□ -1.43
YDR008CYDR008C COBP00163 385 aa6.08□□□□□ -1.44
YDR008CYDR008C REI1P38344 393 aaPredicted RBP6.07□□□□□ -1.44
YDR008CYDR008C ELA1P53861 379 aaPredicted RBP6.07□□□□□ -1.44
YDR008CYDR008C YML122CQ03207 126 aa6.07□□□□□ -1.44
YDR008CYDR008C YLR358CO13565 187 aa6.06□□□□□ -1.44
YDR008CYDR008C PRE10P21242 288 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
YDR008CYDR008C DUR3P33413 735 aa6.06□□□□□ -1.44
YDR008CYDR008C CMR1Q12510 522 aaKnown RBP6.06□□□□□ -1.44
YDR008CYDR008C NPR1P22211 790 aa6.05□□□□□ -1.44
YDR008CYDR008C PUP1P25043 261 aa6.05□□□□□ -1.44
YDR008CYDR008C SMY2P32909 740 aaKnown RBP6.05□□□□□ -1.44
YDR008CYDR008C YGR045CP53229 120 aa6.05□□□□□ -1.44
YDR008CYDR008C SLI1P53304 468 aa6.05□□□□□ -1.44
YDR008CYDR008C RIM11P38615 370 aa6.04□□□□□ -1.44
YDR008CYDR008C CWC15Q03772 175 aaKnown RBP6.03□□□□□ -1.44
YDR008CYDR008C SMC1P32908 1225 aa6.02□□□□□ -1.45
YDR008CYDR008C UTP22P53254 1237 aaPredicted RBP6.01□□□□□ -1.45
YDR008CYDR008C SNO2P53823 222 aa6.01□□□□□ -1.45
YDR008CYDR008C CPS1P27614 576 aa6□□□□□ -1.45
YDR008CYDR008C PUS9Q12069 462 aa6□□□□□ -1.45
YDR008CYDR008C HGH1P48362 394 aaKnown RBP5.99□□□□□ -1.45
YDR008CYDR008C PUS7Q08647 676 aaKnown RBP5.99□□□□□ -1.45
YDR008CYDR008C PRP5P21372 849 aaPredicted RBP5.98□□□□□ -1.45
YDR008CYDR008C MPT5P39016 859 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
YDR008CYDR008C PNP1Q05788 311 aa5.98□□□□□ -1.45
YDR008CYDR008C NNK1P36003 928 aa5.97□□□□□ -1.45
YDR008CYDR008C NMD3P38861 518 aaKnown RBP5.97□□□□□ -1.45
YDR008CYDR008C TAT2P38967 592 aa5.97□□□□□ -1.45
YDR008CYDR008C TPP1Q03796 238 aa5.97□□□□□ -1.45
YDR008CYDR008C RRN6P32786 894 aa5.96□□□□□ -1.46
YDR008CYDR008C YDR132CQ03900 495 aa5.96□□□□□ -1.46
YDR008CYDR008C SAM35P14693 329 aa5.95□□□□□ -1.46
YDR008CYDR008C LSO1Q3E827 93 aa5.95□□□□□ -1.46
YDR008CYDR008C TY1A-LR4P0C2I8 440 aaKnown RBP5.94□□□□□ -1.46
YDR008CYDR008C TY1A-DR6P0CX70 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-ER1P0CX71 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-LR2P0CX72 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-PLP0CX73 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-JR1P0CX74 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-LR3P0CX75 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-ML2P0CX76 440 aa5.94□□□□□ -1.46
YDR008CYDR008C AVO1Q08236 1176 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-GR1Q12085 440 aa5.94□□□□□ -1.46
YDR008CYDR008C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.94□□□□□ -1.46
YDR008CYDR008C TY1A-OLQ92392 440 aaKnown RBP5.94□□□□□ -1.46
YDR008CYDR008C YML083CQ04526 418 aa5.92□□□□□ -1.46
YDR008CYDR008C TRM2P33753 639 aa5.91□□□□□ -1.46
YDR008CYDR008C SPT20P50875 604 aa5.91□□□□□ -1.46
YDR008CYDR008C FOL2P51601 243 aaKnown RBP5.91□□□□□ -1.46
YDR008CYDR008C MSE1P48525 536 aa5.9□□□□□ -1.46
YDR008CYDR008C YHL012WP38709 493 aa5.89□□□□□ -1.47
YDR008CYDR008C AIM26P32858 118 aa5.88□□□□□ -1.47
YDR008CYDR008C SUN4P53616 420 aa5.88□□□□□ -1.47
YDR008CYDR008C ECM2P38241 364 aaKnown RBP5.86□□□□□ -1.47
YDR008CYDR008C MEF2P39677 819 aa5.85□□□□□ -1.47
YDR008CYDR008C GCN5Q03330 439 aa5.85□□□□□ -1.47
YDR008CYDR008C SLS1P42900 643 aa5.84□□□□□ -1.47
YDR008CYDR008C MDL2P33311 773 aa5.83□□□□□ -1.48
YDR008CYDR008C LAM1P38851 1228 aa5.83□□□□□ -1.48
YDR008CYDR008C BOL3P39724 118 aa5.83□□□□□ -1.48
YDR008CYDR008C YLR257WQ06146 321 aaKnown RBP5.83□□□□□ -1.48
YDR008CYDR008C RET1P22276 1149 aaKnown RBP5.82□□□□□ -1.48
YDR008CYDR008C RSC4Q02206 625 aa5.82□□□□□ -1.48
YDR008CYDR008C ARL1P38116 183 aaKnown RBP5.81□□□□□ -1.48
YDR008CYDR008C SAP155P43612 1002 aa5.81□□□□□ -1.48
YDR008CYDR008C SGD1Q06132 899 aa5.81□□□□□ -1.48
YDR008CYDR008C RAD53P22216 821 aa5.8□□□□□ -1.48
YDR008CYDR008C HCM1P25364 564 aa5.78□□□□□ -1.48
YDR008CYDR008C YAF9P53930 226 aa5.78□□□□□ -1.48
YDR008CYDR008C CTF4Q01454 927 aa5.78□□□□□ -1.48
YDR008CYDR008C FUR4P05316 633 aaKnown RBP5.77□□□□□ -1.49
YDR008CYDR008C NEM1P38757 446 aa5.77□□□□□ -1.49
YDR008CYDR008C ROT1Q03691 256 aa5.77□□□□□ -1.49
YDR008CYDR008C EXO5P38289 585 aa5.76□□□□□ -1.49
YDR008CYDR008C YAR028WP39548 234 aa5.76□□□□□ -1.49
YDR008CYDR008C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
YDR008CYDR008C NOB1Q08444 459 aaKnown RBP5.76□□□□□ -1.49
YDR008CYDR008C YOR352WQ08816 343 aa5.76□□□□□ -1.49
YDR008CYDR008C CHS7P38843 316 aa5.75□□□□□ -1.49
YDR008CYDR008C PLB2Q03674 706 aa5.75□□□□□ -1.49
YDR008CYDR008C DUS4Q06063 367 aa5.75□□□□□ -1.49
YDR008CYDR008C NUT1P53114 1132 aa5.74□□□□□ -1.49
YDR008CYDR008C NTO1Q12311 748 aa5.74□□□□□ -1.49
YDR008CYDR008C CYC1P00044 109 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms