RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W GFD1Q04839 188 aaKnown RBP8.9□□□□□ -0.98
ABP1YCR088W EIS1Q05050 843 aaKnown RBP8.9□□□□□ -0.98
ABP1YCR088W HCR1Q05775 265 aaKnown RBP8.9□□□□□ -0.98
ABP1YCR088W TLG2Q08144 397 aa8.9□□□□□ -0.98
ABP1YCR088W RPL22AP05749 121 aaKnown RBP8.89□□□□□ -0.99
ABP1YCR088W STE11P23561 717 aa8.89□□□□□ -0.99
ABP1YCR088W STO1P34160 861 aaKnown RBP8.89□□□□□ -0.99
ABP1YCR088W YET1P35723 206 aa8.89□□□□□ -0.99
ABP1YCR088W YHL050CP38721 697 aa8.89□□□□□ -0.99
ABP1YCR088W LYS14P40971 790 aa8.89□□□□□ -0.99
ABP1YCR088W LSC2P53312 427 aa8.89□□□□□ -0.99
ABP1YCR088W MMR1Q06324 491 aa8.89□□□□□ -0.99
ABP1YCR088W YOR111WQ99210 232 aa8.89□□□□□ -0.99
ABP1YCR088W RPS6AP0CX37 236 aaKnown RBP8.89□□□□□ -0.99
ABP1YCR088W RPS6BP0CX38 236 aaPredicted RBP8.89□□□□□ -0.99
ABP1YCR088W ANP1P32629 500 aa8.89□□□□□ -0.99
ABP1YCR088W PRP40P33203 583 aaKnown RBP8.89□□□□□ -0.99
ABP1YCR088W MYO3P36006 1272 aa8.89□□□□□ -0.99
ABP1YCR088W CCC2P38995 1004 aa8.89□□□□□ -0.99
ABP1YCR088W YGR237CP50089 785 aa8.89□□□□□ -0.99
ABP1YCR088W LAM6Q08001 693 aa8.89□□□□□ -0.99
ABP1YCR088W SSA2P10592 639 aaKnown RBP8.88□□□□□ -0.99
ABP1YCR088W CLB5P30283 435 aa8.88□□□□□ -0.99
ABP1YCR088W RXT2P38255 430 aa8.88□□□□□ -0.99
ABP1YCR088W REI1P38344 393 aaPredicted RBP8.88□□□□□ -0.99
ABP1YCR088W SPL2P38839 148 aa8.88□□□□□ -0.99
ABP1YCR088W ICP55P40051 511 aa8.88□□□□□ -0.99
ABP1YCR088W PSR2Q07949 397 aa8.88□□□□□ -0.99
ABP1YCR088W ATG9Q12142 997 aa8.88□□□□□ -0.99
ABP1YCR088W YOL098CQ12496 1037 aa8.88□□□□□ -0.99
ABP1YCR088W BMH1P29311 267 aaKnown RBP8.87□□□□□ -0.99
ABP1YCR088W SMC3P47037 1230 aa8.87□□□□□ -0.99
ABP1YCR088W GYL1Q04322 720 aa8.87□□□□□ -0.99
ABP1YCR088W VPS38Q05919 439 aa8.87□□□□□ -0.99
ABP1YCR088W PMD1P32634 1753 aa8.86□□□□□ -0.99
ABP1YCR088W HOP09932 586 aa8.86□□□□□ -0.99
ABP1YCR088W MCM3P24279 971 aaKnown RBP8.86□□□□□ -0.99
ABP1YCR088W SAP190P36123 1033 aa8.86□□□□□ -0.99
ABP1YCR088W RPN11P43588 306 aaKnown RBP8.86□□□□□ -0.99
ABP1YCR088W FAR11P53917 953 aa8.86□□□□□ -0.99
ABP1YCR088W RBA50Q04418 439 aa8.86□□□□□ -0.99
ABP1YCR088W FIG2P25653 1609 aa8.86□□□□□ -0.99
ABP1YCR088W CYB2P00175 591 aa8.86□□□□□ -0.99
ABP1YCR088W MSH1P25846 959 aa8.86□□□□□ -0.99
ABP1YCR088W PTK1P36002 662 aaPredicted RBP8.86□□□□□ -0.99
ABP1YCR088W SPT8P38915 602 aa8.86□□□□□ -0.99
ABP1YCR088W CAJ1P39101 391 aa8.86□□□□□ -0.99
ABP1YCR088W ALF1P53904 254 aa8.86□□□□□ -0.99
ABP1YCR088W DPH6Q12429 685 aa8.86□□□□□ -0.99
ABP1YCR088W MET6P05694 767 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W CDC37P06101 506 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W MAK31P23059 88 aa8.85□□□□□ -0.99
ABP1YCR088W PRO3P32263 286 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W NPL4P33755 580 aa8.85□□□□□ -0.99
ABP1YCR088W BOI1P38041 980 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W MAL31P38156 614 aa8.85□□□□□ -0.99
ABP1YCR088W NUG1P40010 520 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W MVP1P40959 511 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W BOP3P53958 396 aa8.85□□□□□ -0.99
ABP1YCR088W EBS1Q03466 884 aaKnown RBP8.85□□□□□ -0.99
ABP1YCR088W GIS4Q04233 774 aa8.85□□□□□ -0.99
ABP1YCR088W SML1Q04964 104 aa8.85□□□□□ -0.99
ABP1YCR088W DEP1P31385 405 aa8.84□□□□□ -0.99
ABP1YCR088W CDC27P38042 758 aa8.84□□□□□ -0.99
ABP1YCR088W NPR2P39923 615 aa8.84□□□□□ -0.99
ABP1YCR088W ATG3P40344 310 aa8.84□□□□□ -0.99
ABP1YCR088W NDC80P40460 691 aa8.84□□□□□ -0.99
ABP1YCR088W RPT4P53549 437 aaKnown RBP8.84□□□□□ -0.99
ABP1YCR088W RAT1Q02792 1006 aaKnown RBP8.84□□□□□ -0.99
ABP1YCR088W IRC4Q03036 179 aa8.84□□□□□ -0.99
ABP1YCR088W MRD1Q06106 887 aaKnown RBP8.84□□□□□ -0.99
ABP1YCR088W HIS4P00815 799 aaKnown RBP8.84□□□□□ -1
ABP1YCR088W CAF20P12962 161 aaKnown RBP8.84□□□□□ -1
ABP1YCR088W RNR3P21672 869 aaKnown RBP8.84□□□□□ -1
ABP1YCR088W RIT1P23796 513 aa8.84□□□□□ -1
ABP1YCR088W LCB1P25045 558 aaKnown RBP8.84□□□□□ -1
ABP1YCR088W PSO2P30620 661 aa8.84□□□□□ -1
ABP1YCR088W CTM1P38818 585 aa8.84□□□□□ -1
ABP1YCR088W YIL055CP40523 627 aaKnown RBP8.84□□□□□ -1
ABP1YCR088W AIP1P46680 615 aaKnown RBP8.84□□□□□ -1
ABP1YCR088W GDE1Q02979 1223 aa8.84□□□□□ -1
ABP1YCR088W YOL075CQ08234 1294 aa8.84□□□□□ -1
ABP1YCR088W HMI1Q12039 706 aa8.84□□□□□ -1
ABP1YCR088W GIN4Q12263 1142 aa8.84□□□□□ -1
ABP1YCR088W NBL1Q3E7Y6 73 aa8.84□□□□□ -1
ABP1YCR088W STI1P15705 589 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
ABP1YCR088W DPB3P27344 201 aa8.83□□□□□ -1
ABP1YCR088W HIR1P32479 840 aa8.83□□□□□ -1
ABP1YCR088W GEF1P37020 779 aa8.83□□□□□ -1
ABP1YCR088W SSP1P38871 571 aa8.83□□□□□ -1
ABP1YCR088W RTS1P38903 757 aa8.83□□□□□ -1
ABP1YCR088W VPS41P38959 992 aa8.83□□□□□ -1
ABP1YCR088W SAP1P39955 897 aaKnown RBP8.83□□□□□ -1
ABP1YCR088W YGL140CP53120 1219 aa8.83□□□□□ -1
ABP1YCR088W ERG5P54781 538 aa8.83□□□□□ -1
ABP1YCR088W MRS2Q01926 470 aa8.83□□□□□ -1
ABP1YCR088W YOR296WQ08748 1289 aa8.83□□□□□ -1
ABP1YCR088W SPO12P17123 173 aa8.82□□□□□ -1
ABP1YCR088W SPO11P23179 398 aa8.82□□□□□ -1
ABP1YCR088W CLB1P24868 471 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms