RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W UTP22P53254 1237 aaPredicted RBP7.53□□□□□ -1.2
SLX1YBR228W SDH1Q00711 640 aa7.53□□□□□ -1.2
SLX1YBR228W GPI13Q07830 1017 aa7.53□□□□□ -1.2
SLX1YBR228W MAG2Q06436 670 aaKnown RBP7.52□□□□□ -1.21
SLX1YBR228W PRP5P21372 849 aaPredicted RBP7.51□□□□□ -1.21
SLX1YBR228W REI1P38344 393 aaPredicted RBP7.51□□□□□ -1.21
SLX1YBR228W YHL050CP38721 697 aa7.51□□□□□ -1.21
SLX1YBR228W YHR219WP38900 624 aa7.51□□□□□ -1.21
SLX1YBR228W AVT1P47082 602 aa7.51□□□□□ -1.21
SLX1YBR228W SAM37P50110 327 aa7.51□□□□□ -1.21
SLX1YBR228W YAF9P53930 226 aa7.51□□□□□ -1.21
SLX1YBR228W MON2P48563 1636 aaPredicted RBP7.51□□□□□ -1.21
SLX1YBR228W MEC3Q02574 474 aa7.5□□□□□ -1.21
SLX1YBR228W NSI1Q12457 570 aa7.5□□□□□ -1.21
SLX1YBR228W CIT3P43635 486 aa7.49□□□□□ -1.21
SLX1YBR228W SGS1P35187 1447 aa7.49□□□□□ -1.21
SLX1YBR228W GCD1P09032 578 aaPredicted RBP7.48□□□□□ -1.21
SLX1YBR228W CIC1P38779 376 aaKnown RBP7.48□□□□□ -1.21
SLX1YBR228W RVS167P39743 482 aaKnown RBP7.48□□□□□ -1.21
SLX1YBR228W SAP155P43612 1002 aa7.48□□□□□ -1.21
SLX1YBR228W TY1A-LR4P0C2I8 440 aaKnown RBP7.46□□□□□ -1.22
SLX1YBR228W TY1A-DR6P0CX70 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-ER1P0CX71 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-LR2P0CX72 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-PLP0CX73 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-JR1P0CX74 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-LR3P0CX75 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-ML2P0CX76 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-GR1Q12085 440 aa7.46□□□□□ -1.22
SLX1YBR228W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.46□□□□□ -1.22
SLX1YBR228W TY1A-OLQ92392 440 aaKnown RBP7.46□□□□□ -1.22
SLX1YBR228W YKL077WP36081 392 aa7.45□□□□□ -1.22
SLX1YBR228W SSF1P38789 453 aaPredicted RBP7.45□□□□□ -1.22
SLX1YBR228W MSH4P40965 878 aaPredicted RBP7.45□□□□□ -1.22
SLX1YBR228W ELA1P53861 379 aaPredicted RBP7.45□□□□□ -1.22
SLX1YBR228W RCM1P53972 490 aa7.45□□□□□ -1.22
SLX1YBR228W AVO1Q08236 1176 aa7.45□□□□□ -1.22
SLX1YBR228W RPS4AP0CX35 261 aaKnown RBP7.44□□□□□ -1.22
SLX1YBR228W RPS4BP0CX36 261 aaKnown RBP7.44□□□□□ -1.22
SLX1YBR228W SEA4P38164 1038 aa7.44□□□□□ -1.22
SLX1YBR228W IRC24P40580 263 aa7.44□□□□□ -1.22
SLX1YBR228W YCS4Q06156 1176 aa7.44□□□□□ -1.22
SLX1YBR228W INO80P53115 1489 aa7.43□□□□□ -1.22
SLX1YBR228W SHU2P38957 223 aa7.43□□□□□ -1.22
SLX1YBR228W THI12P42883 340 aa7.43□□□□□ -1.22
SLX1YBR228W THI5P43534 340 aa7.43□□□□□ -1.22
SLX1YBR228W THI11P47183 340 aa7.43□□□□□ -1.22
SLX1YBR228W THI13Q07748 340 aa7.43□□□□□ -1.22
SLX1YBR228W YOR059CQ08448 450 aaKnown RBP7.43□□□□□ -1.22
SLX1YBR228W NFS1P25374 497 aa7.41□□□□□ -1.22
SLX1YBR228W GCD6P32501 712 aaKnown RBP7.41□□□□□ -1.22
SLX1YBR228W TCB3Q03640 1545 aaKnown RBP7.41□□□□□ -1.22
SLX1YBR228W YGR045CP53229 120 aa7.4□□□□□ -1.22
SLX1YBR228W EAR1Q03212 550 aa7.4□□□□□ -1.22
SLX1YBR228W TY1B-DR4Q07793 1604 aa7.39□□□□□ -1.23
SLX1YBR228W POL12P38121 705 aaPredicted RBP7.39□□□□□ -1.23
SLX1YBR228W EXO5P38289 585 aa7.39□□□□□ -1.23
SLX1YBR228W STM1P39015 273 aaKnown RBP7.39□□□□□ -1.23
SLX1YBR228W SLS1P42900 643 aa7.39□□□□□ -1.23
SLX1YBR228W RSM26P47141 266 aa7.39□□□□□ -1.23
SLX1YBR228W ALT1P52893 592 aa7.39□□□□□ -1.23
SLX1YBR228W PEX13P80667 386 aa7.39□□□□□ -1.23
SLX1YBR228W SMY2P32909 740 aaKnown RBP7.38□□□□□ -1.23
SLX1YBR228W DAL4Q04895 635 aa7.38□□□□□ -1.23
SLX1YBR228W UGA4P32837 571 aa7.37□□□□□ -1.23
SLX1YBR228W PRP40P33203 583 aaKnown RBP7.37□□□□□ -1.23
SLX1YBR228W ARL1P38116 183 aaKnown RBP7.37□□□□□ -1.23
SLX1YBR228W OYE3P41816 400 aaPredicted RBP7.37□□□□□ -1.23
SLX1YBR228W MTR4P47047 1073 aaKnown RBP7.37□□□□□ -1.23
SLX1YBR228W PHO4P07270 312 aaKnown RBP7.36□□□□□ -1.23
SLX1YBR228W SQT1P35184 431 aa7.36□□□□□ -1.23
SLX1YBR228W NNK1P36003 928 aa7.36□□□□□ -1.23
SLX1YBR228W ATG14P38270 344 aa7.36□□□□□ -1.23
SLX1YBR228W PPX1P38698 397 aa7.36□□□□□ -1.23
SLX1YBR228W MSH3P25336 1018 aa7.35□□□□□ -1.23
SLX1YBR228W MET4P32389 672 aa7.35□□□□□ -1.23
SLX1YBR228W VPS35P34110 944 aa7.35□□□□□ -1.23
SLX1YBR228W LRG1P35688 1017 aa7.35□□□□□ -1.23
SLX1YBR228W NEM1P38757 446 aa7.35□□□□□ -1.23
SLX1YBR228W MSC6Q08818 692 aaKnown RBP7.35□□□□□ -1.23
SLX1YBR228W OXR1Q08952 273 aa7.35□□□□□ -1.23
SLX1YBR228W KAR2P16474 682 aaKnown RBP7.34□□□□□ -1.23
SLX1YBR228W HSP78P33416 811 aa7.34□□□□□ -1.23
SLX1YBR228W YAR028WP39548 234 aa7.34□□□□□ -1.23
SLX1YBR228W DAK2P43550 591 aa7.34□□□□□ -1.23
SLX1YBR228W TRE1Q08919 783 aa7.34□□□□□ -1.23
SLX1YBR228W YVC1Q12324 675 aa7.34□□□□□ -1.23
SLX1YBR228W WHI5Q12416 295 aa7.34□□□□□ -1.23
SLX1YBR228W DFG16Q99234 619 aa7.34□□□□□ -1.23
SLX1YBR228W ADP1P25371 1049 aa7.33□□□□□ -1.24
SLX1YBR228W SEG2P34250 1132 aa7.33□□□□□ -1.24
SLX1YBR228W NMD3P38861 518 aaKnown RBP7.33□□□□□ -1.24
SLX1YBR228W ULP1Q02724 621 aa7.33□□□□□ -1.24
SLX1YBR228W NOG1Q02892 647 aaKnown RBP7.33□□□□□ -1.24
SLX1YBR228W TPP1Q03796 238 aa7.33□□□□□ -1.24
SLX1YBR228W AOS1Q06624 347 aa7.33□□□□□ -1.24
SLX1YBR228W PRO1P32264 428 aa7.32□□□□□ -1.24
SLX1YBR228W ELM1P32801 640 aa7.32□□□□□ -1.24
SLX1YBR228W XKS1P42826 600 aa7.32□□□□□ -1.24
SLX1YBR228W YNR063WP53749 607 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms