RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Pcdh10E9PXQ7 1057 aa11.32□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Ppp1r15aP17564 657 aa11.32□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Q3TQI7 289 aaKnown RBP11.32□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Arhgap23Q69ZH9 1483 aa11.32□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Nsd3Q6P2L6 1439 aa11.32□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Rtf1A2AQ19 715 aaKnown RBP11.31□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 CatipB9EKE5 520 aa11.31□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Sptbn5F6UCX4 1208 aa11.31□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Ino80Q6ZPV2 1559 aa11.31□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Trim28Q62318 834 aa11.31□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Pip4k2bQ80XI4 416 aa11.31□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Fam83gQ5SWY7 812 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Gnai1B2RSH2 354 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Evi5lH3BKQ3 813 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Amotl2Q8K371 772 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Gnai3Q9DC51 354 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Dmrtc1Q9D9R7 182 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Tfip11Q9ERA6 838 aaKnown RBP11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Ttc21aQ8C0S4 1314 aa11.3□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Tecpr2Q3UH45 1423 aa11.29□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Alpk3Q924C5 1678 aa11.29□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Nek4Q9Z1J2 792 aa11.29□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 DnmbpQ6TXD4 1580 aa11.29□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Iqsec2Q5DU25 1478 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Rabep1O35551 862 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Eya1P97767 591 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 GnpatP98192 678 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Ipo4Q8VI75 1082 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Cul9Q80TT8 1865 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Med14A2ABV5 1459 aaKnown RBP11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Ttc41Q692V3 1318 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 MaddQ80U28 1577 aa11.28□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Map3k13Q1HKZ5 959 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 FanclQ9CR14 375 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Znf521Q6KAS7 1311 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Kif13aQ9EQW7 1749 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Catsper2A2ARP9 588 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Aldh1l1Q8R0Y6 902 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Abca14E9Q8F8 1683 aa11.27□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Jarid2Q62315 1234 aa11.26□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Nlgn1Q99K10 843 aa11.26□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 SkilQ60665 675 aa11.26□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Hecw2Q6I6G8 1578 aa11.26□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 SlkO54988 1233 aa11.26□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Fkbp4P30416 458 aa11.26□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Plxnc1Q9QZC2 1574 aa11.25□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 MvpQ9EQK5 861 aa11.25□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Nrxn1Q9CS84 1514 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Fchsd2Q3USJ8 740 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Ssh1Q76I79 1042 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Frmpd2A0A140LI67 1392 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 AU015836B2RUM3 263 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Map7O88735 730 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Rsph4aQ8BYM7 716 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 FancaQ9JL70 1439 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Fyb1O35601 819 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Sv2bQ8BG39 683 aa11.24□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Trpm1Q2TV84 1622 aa11.23□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Prkar2bP31324 416 aa11.23□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Ccdc155Q80VJ8 648 aa11.23□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 CarsQ9ER72 831 aaKnown RBP11.23□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Rtn4Q99P72 1162 aaKnown RBP11.23□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Nsfl1cQ9CZ44 370 aaKnown RBP11.23□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 TatQ8QZR1 454 aa11.22□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Ccdc171E9Q1U1 1324 aa11.22□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Fam135bQ9DAI6 1403 aa11.22□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Ankrd44B2RXR6 993 aa11.22□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Tbc1d32Q3URV1 1296 aa11.22□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Chpf2Q3UU43 768 aa11.22□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Sipa1l1Q8C0T5 1782 aa11.21□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Zbtb45Q52KG4 520 aa11.21□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Trim27Q62158 513 aa11.21□□□□□ -0.61
Hmgcs1-201ENSMUST00000179869 Exoc6bA6H5Z3 810 aa11.21□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Taok2Q6ZQ29 1240 aa11.21□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Dnajc10Q9DC23 793 aa11.21□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Arhgef28P97433 1693 aa11.21□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Slc4a10Q5DTL9 1118 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Atl3Q91YH5 541 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Pik3r4Q8VD65 1358 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Gm10471E9Q1C7 252 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Tbc1d9Q3UYK3 1264 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Q9D2X8 372 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 NktrP30415 1453 aa11.2□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Il4rP16382 810 aa11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Prune1Q8BIW1 454 aa11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 KnstrnQ9D9Z1 312 aaKnown RBP11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 KdrP35918 1367 aa11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Arhgef1Q61210 920 aaKnown RBP11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Bcar3Q9QZK2 820 aa11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Fam50bQ9WTJ8 334 aa11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Prdm2A2A7B5 1709 aaKnown RBP11.19□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Brd1E9PZ26 1189 aaKnown RBP11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Terf2O35144 541 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Hoxc9P09633 260 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Hspa2P17156 633 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Mcm4P49717 862 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Cwc27Q3TKY6 469 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Cyp2d12Q8BVD2 504 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Tshz3Q8CGV9 1081 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Kif24Q6NWW5 1356 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms