RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 NischQ80TM9 1593 aa17.03■□□□□ 0.32
Hmgcs1-201ENSMUST00000179869 Gm35339A0A140LHH9 1649 aa16.67■□□□□ 0.26
Hmgcs1-201ENSMUST00000179869 Rhox8Q6VSS7 320 aa16.67■□□□□ 0.26
Hmgcs1-201ENSMUST00000179869 Abcc9P70170 1546 aa16.34■□□□□ 0.21
Hmgcs1-201ENSMUST00000179869 Abcc8B2RUS7 1588 aa16.07■□□□□ 0.16
Hmgcs1-201ENSMUST00000179869 Ccdc136Q3TVA9 1136 aa15.5■□□□□ 0.07
Hmgcs1-201ENSMUST00000179869 Ehmt2Q9Z148 1263 aaKnown RBP15.34■□□□□ 0.05
Hmgcs1-201ENSMUST00000179869 ScribQ80U72 1612 aa15.04■□□□□ -0
Hmgcs1-201ENSMUST00000179869 Ccdc180J3QNE4 1664 aa14.95□□□□□ -0.02
Hmgcs1-201ENSMUST00000179869 Rtl1Q7M732 1744 aa14.94□□□□□ -0.02
Hmgcs1-201ENSMUST00000179869 Rb1cc1Q9ESK9 1588 aa14.93□□□□□ -0.02
Hmgcs1-201ENSMUST00000179869 Zcchc6Q5BLK4 1491 aaKnown RBP14.89□□□□□ -0.03
Hmgcs1-201ENSMUST00000179869 Kdm5dQ62240 1548 aa14.84□□□□□ -0.03
Hmgcs1-201ENSMUST00000179869 Trim41Q5NCC3 630 aa14.83□□□□□ -0.04
Hmgcs1-201ENSMUST00000179869 Cngb1E1AZ71 1325 aa14.78□□□□□ -0.04
Hmgcs1-201ENSMUST00000179869 Gab3Q8BSM5 595 aa14.74□□□□□ -0.05
Hmgcs1-201ENSMUST00000179869 Rpgrip1Q9EPQ2 1331 aa14.73□□□□□ -0.05
Hmgcs1-201ENSMUST00000179869 Dcaf1Q80TR8 1506 aa14.69□□□□□ -0.06
Hmgcs1-201ENSMUST00000179869 Baz1aO88379 1555 aa14.62□□□□□ -0.07
Hmgcs1-201ENSMUST00000179869 NacadQ5SWP3 1504 aa14.6□□□□□ -0.07
Hmgcs1-201ENSMUST00000179869 Acin1Q9JIX8 1338 aaKnown RBP14.59□□□□□ -0.07
Hmgcs1-201ENSMUST00000179869 Esf1Q3V1V3 845 aaKnown RBP14.54□□□□□ -0.08
Hmgcs1-201ENSMUST00000179869 HrcG5E8J6 738 aa14.52□□□□□ -0.08
Hmgcs1-201ENSMUST00000179869 Chic1Q8CBW7 227 aa14.49□□□□□ -0.09
Hmgcs1-201ENSMUST00000179869 Cecr2E9Q2Z1 1453 aa14.33□□□□□ -0.12
Hmgcs1-201ENSMUST00000179869 Pcgf6Q99NA9 353 aa14.3□□□□□ -0.12
Hmgcs1-201ENSMUST00000179869 Sycp2Q9CUU3 1500 aa14.3□□□□□ -0.12
Hmgcs1-201ENSMUST00000179869 Smarca2Q6DIC0 1577 aa14.24□□□□□ -0.13
Hmgcs1-201ENSMUST00000179869 Rsf1E9PWW9 1441 aaKnown RBP14.22□□□□□ -0.13
Hmgcs1-201ENSMUST00000179869 Myt1lP97500 1187 aa14.2□□□□□ -0.14
Hmgcs1-201ENSMUST00000179869 Ccdc88bQ4QRL3 1481 aa14.16□□□□□ -0.14
Hmgcs1-201ENSMUST00000179869 Cep164Q5DU05 1446 aa14.12□□□□□ -0.15
Hmgcs1-201ENSMUST00000179869 Zeb1Q64318 1117 aa14.1□□□□□ -0.15
Hmgcs1-201ENSMUST00000179869 Brd4Q9ESU6 1400 aaKnown RBP14.1□□□□□ -0.15
Hmgcs1-201ENSMUST00000179869 Supt5hO55201 1082 aaKnown RBP14.09□□□□□ -0.15
Hmgcs1-201ENSMUST00000179869 Il27Q8K3I6 234 aa14.05□□□□□ -0.16
Hmgcs1-201ENSMUST00000179869 UbtfP25976 765 aaKnown RBP14.03□□□□□ -0.16
Hmgcs1-201ENSMUST00000179869 BicraF8VPZ9 1578 aa14.03□□□□□ -0.16
Hmgcs1-201ENSMUST00000179869 Synj1Q8CHC4 1574 aa14.03□□□□□ -0.16
Hmgcs1-201ENSMUST00000179869 Crybg2B7ZCC2 1516 aa14.01□□□□□ -0.17
Hmgcs1-201ENSMUST00000179869 Npm2Q80W85 207 aa14.01□□□□□ -0.17
Hmgcs1-201ENSMUST00000179869 Golga3P55937 1487 aa13.97□□□□□ -0.17
Hmgcs1-201ENSMUST00000179869 CftrP26361 1476 aa13.92□□□□□ -0.18
Hmgcs1-201ENSMUST00000179869 Mier1Q5UAK0 511 aa13.91□□□□□ -0.18
Hmgcs1-201ENSMUST00000179869 Ppargc1bQ8VHJ7 1014 aa13.91□□□□□ -0.18
Hmgcs1-201ENSMUST00000179869 Ap3b1Q9Z1T1 1105 aa13.87□□□□□ -0.19
Hmgcs1-201ENSMUST00000179869 Plekhg3Q4VAC9 1341 aa13.82□□□□□ -0.2
Hmgcs1-201ENSMUST00000179869 Neurod1Q60867 357 aa13.77□□□□□ -0.21
Hmgcs1-201ENSMUST00000179869 Cc2d2aQ8CFW7 1633 aa13.7□□□□□ -0.22
Hmgcs1-201ENSMUST00000179869 Wdr66E9Q743 1299 aa13.7□□□□□ -0.22
Hmgcs1-201ENSMUST00000179869 Smarca4Q3TKT4 1613 aaKnown RBP13.68□□□□□ -0.22
Hmgcs1-201ENSMUST00000179869 Thoc2B1AZI6 1594 aaKnown RBP13.66□□□□□ -0.22
Hmgcs1-201ENSMUST00000179869 Sall2Q9QX96 1004 aa13.64□□□□□ -0.23
Hmgcs1-201ENSMUST00000179869 Cttnbp2B9EJA2 1648 aa13.63□□□□□ -0.23
Hmgcs1-201ENSMUST00000179869 Pds5bQ4VA53 1446 aaKnown RBP13.61□□□□□ -0.23
Hmgcs1-201ENSMUST00000179869 NefmP08553 848 aa13.61□□□□□ -0.23
Hmgcs1-201ENSMUST00000179869 Rapgef2Q8CHG7 1496 aa13.6□□□□□ -0.23
Hmgcs1-201ENSMUST00000179869 Baz1bQ9Z277 1479 aa13.58□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Iqgap2Q3UQ44 1575 aa13.58□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Eid3Q3V124 375 aa13.56□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Lmod2Q3UHZ5 550 aa13.54□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Kif15Q6P9L6 1387 aa13.54□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Clip1Q922J3 1391 aa13.53□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Top2bQ64511 1612 aa13.53□□□□□ -0.24
Hmgcs1-201ENSMUST00000179869 Cep162Q6ZQ06 1403 aa13.52□□□□□ -0.25
Hmgcs1-201ENSMUST00000179869 Aebp2Q9Z248 504 aaKnown RBP13.51□□□□□ -0.25
Hmgcs1-201ENSMUST00000179869 Fmn1Q05860 1466 aa13.51□□□□□ -0.25
Hmgcs1-201ENSMUST00000179869 Las1lA2BE28 776 aaKnown RBP13.48□□□□□ -0.25
Hmgcs1-201ENSMUST00000179869 Atad2bE9Q166 1460 aaKnown RBP13.48□□□□□ -0.25
Hmgcs1-201ENSMUST00000179869 Ubl4bQ9CQ84 188 aa13.46□□□□□ -0.25
Hmgcs1-201ENSMUST00000179869 PtprkP35822 1457 aa13.43□□□□□ -0.26
Hmgcs1-201ENSMUST00000179869 Fam50aQ9WV03 339 aaKnown RBP13.42□□□□□ -0.26
Hmgcs1-201ENSMUST00000179869 Mapk8ip2Q9ERE9 830 aa13.42□□□□□ -0.26
Hmgcs1-201ENSMUST00000179869 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Hmgcs1-201ENSMUST00000179869 Top2aQ01320 1528 aaKnown RBP13.4□□□□□ -0.26
Hmgcs1-201ENSMUST00000179869 Csrnp3P59055 597 aa13.39□□□□□ -0.27
Hmgcs1-201ENSMUST00000179869 Frmpd1A2AKB4 1549 aa13.39□□□□□ -0.27
Hmgcs1-201ENSMUST00000179869 Fam135aQ6NS59 1506 aa13.35□□□□□ -0.27
Hmgcs1-201ENSMUST00000179869 Ube2uB1AUC4 352 aa13.33□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 Setd5Q5XJV7 1441 aa13.32□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 Gm38655A0A286YDK6 273 aa13.32□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 Ercc6F8VPZ5 1481 aa13.32□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 TonslQ6NZL6 1363 aa13.3□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 Nop58Q6DFW4 536 aaKnown RBP13.29□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 Cdk11bP24788 784 aaKnown RBP13.28□□□□□ -0.28
Hmgcs1-201ENSMUST00000179869 1700123L14RikQ3V2K7 440 aa13.26□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 Dnajc5bQ9CQ94 199 aa13.26□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 Arhgap35Q91YM2 1499 aa13.25□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 BlmO88700 1416 aa13.24□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 Cux2P70298 1426 aa13.24□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 Wdr62Q3U3T8 1523 aa13.23□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 Anks4bQ8K3X6 423 aa13.23□□□□□ -0.29
Hmgcs1-201ENSMUST00000179869 Eea1Q8BL66 1411 aa13.2□□□□□ -0.3
Hmgcs1-201ENSMUST00000179869 ClspnQ80YR7 1315 aa13.19□□□□□ -0.3
Hmgcs1-201ENSMUST00000179869 Arap1Q4LDD4 1452 aa13.18□□□□□ -0.3
Hmgcs1-201ENSMUST00000179869 Chic2Q9D9G3 165 aa13.18□□□□□ -0.3
Hmgcs1-201ENSMUST00000179869 Ccdc18Q640L5 1455 aa13.17□□□□□ -0.3
Hmgcs1-201ENSMUST00000179869 AqrQ8CFQ3 1481 aaKnown RBP13.13□□□□□ -0.31
Hmgcs1-201ENSMUST00000179869 Phldb1Q6PDH0 1371 aaKnown RBP13.11□□□□□ -0.31
Hmgcs1-201ENSMUST00000179869 Shroom4Q1W617 1475 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms