RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Rabep1O35551 862 aa9.04□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Rtn4Q99P72 1162 aaKnown RBP9.04□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Phf14Q9D4H9 881 aa9.04□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Chd4Q6PDQ2 1915 aaKnown RBP9.04□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Il4rP16382 810 aa9.04□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Scaf1Q5U4C3 1256 aaKnown RBP9.04□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Catsper2A2ARP9 588 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Trim28Q62318 834 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Pip4k2bQ80XI4 416 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Ap3b2Q9JME5 1082 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Fam135bQ9DAI6 1403 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Rrp9Q91WM3 475 aaKnown RBP9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Gemin5Q8BX17 1502 aaKnown RBP9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Iqsec2Q5DU25 1478 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Kif2cQ922S8 721 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 PtpruB1AUH1 1446 aa9.03□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Cps1Q8C196 1500 aa9.02□□□□□ -0.96
Clrn1-202ENSMUST00000055636 Nectin2P32507 530 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Q4VA45 678 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Paxip1Q6NZQ4 1056 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 1700019A02RikA0A087WPV9 146 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Cavin4A2AMM0 362 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Pibf1E9Q6K3 756 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Mcm4P49717 862 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Nutm1Q8BHP2 1126 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Klhdc4Q921I2 584 aa9.02□□□□□ -0.97
Clrn1-202ENSMUST00000055636 AampJ3QN89 436 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Eif4a2P10630 407 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ppp1r15aP17564 657 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Kif20aP97329 887 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 U2surpQ6NV83 1029 aaKnown RBP9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Rsph6aQ8CDR2 708 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Rreb1Q3UH06 1700 aaKnown RBP9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Pik3r4Q8VD65 1358 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Mfap1aC0HKD8 439 aaKnown RBP9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Mfap1bC0HKD9 439 aaKnown RBP9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Evi5lH3BKQ3 813 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ssh1Q76I79 1042 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Cluap1Q8R3P7 413 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 TimelessQ9R1X4 1197 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Rbm25B2RY56 838 aaKnown RBP9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Tmem132eQ6IEE6 982 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Dennd6aQ8BH65 605 aa9.01□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Snap23O09044 210 aa9□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Tmco5bQ80X59 307 aa9□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ccdc60Q8C4J0 545 aa9□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Tnrc6bQ8BKI2 1810 aaKnown RBP9□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ddx17Q501J6 650 aaKnown RBP9□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Nlgn1Q99K10 843 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 4933402E13RikQ9D4D2 429 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Swt1Q9DBQ9 907 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Terf2O35144 541 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ccne1Q61457 408 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Phlpp2Q8BXA7 1320 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Frmpd2A0A140LI67 1392 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Larp1bA0A0A6YXJ7 370 aaKnown RBP8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 AU019823E9PUQ3 292 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ccar1Q8CH18 1146 aaKnown RBP8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 DmtnQ9WV69 405 aa8.99□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Ddit3P35639 168 aa8.98□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Irx6Q9ER75 438 aa8.98□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Topaz1E5FYH1 1653 aa8.98□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Vsig10D3YX43 558 aa8.98□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Nsfl1cQ9CZ44 370 aaKnown RBP8.98□□□□□ -0.97
Clrn1-202ENSMUST00000055636 FancaQ9JL70 1439 aa8.97□□□□□ -0.97
Clrn1-202ENSMUST00000055636 CastP51125 788 aa8.97□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Abcc10Q8R4P9 1501 aa8.97□□□□□ -0.97
Clrn1-202ENSMUST00000055636 GnpatP98192 678 aa8.97□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Aplp1Q03157 653 aa8.96□□□□□ -0.97
Clrn1-202ENSMUST00000055636 Atl3Q91YH5 541 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Stk31Q99MW1 1018 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Cdc37l1Q9CZP7 335 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Ankrd50F7BE84 1390 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Ggnbp2Q5SV77 696 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Slain2Q8CI08 581 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Usp16Q99LG0 825 aa8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Kif20bQ80WE4 1774 aaKnown RBP8.96□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Fchsd2Q3USJ8 740 aa8.95□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Sirt1Q923E4 737 aa8.95□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Parp14Q2EMV9 1817 aa8.95□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Plcb2A3KGF7 1181 aa8.95□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Fyb1O35601 819 aa8.95□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Eya1P97767 591 aa8.95□□□□□ -0.98
Clrn1-202ENSMUST00000055636 N4bp2F8VQG7 1678 aaKnown RBP8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Tns3Q5SSZ5 1440 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Astn2Q80Z10 1352 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Prim1P20664 417 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 G3bp1P97855 465 aaKnown RBP8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 D430041D05RikF6ZGR6 1678 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 SlkO54988 1233 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Rfx1P48377 963 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 TmpoQ61033 693 aaKnown RBP8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 C3P01027 1663 aa8.94□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Ttc21aQ8C0S4 1314 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Kif18aQ91WD7 886 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Maco1Q7TQE6 664 aaKnown RBP8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 PogkQ80TC5 607 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Cog6Q8R3I3 657 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Arap3Q8R5G7 1538 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Kif1aP33173 1695 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms