RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 NischQ80TM9 1593 aa14.01□□□□□ -0.17
Clrn1-202ENSMUST00000055636 Gm35339A0A140LHH9 1649 aa13.69□□□□□ -0.22
Clrn1-202ENSMUST00000055636 Abcc9P70170 1546 aa13.52□□□□□ -0.24
Clrn1-202ENSMUST00000055636 Abcc8B2RUS7 1588 aa13.33□□□□□ -0.28
Clrn1-202ENSMUST00000055636 Rhox8Q6VSS7 320 aa13.03□□□□□ -0.32
Clrn1-202ENSMUST00000055636 ScribQ80U72 1612 aa12.57□□□□□ -0.4
Clrn1-202ENSMUST00000055636 Rtl1Q7M732 1744 aa12.31□□□□□ -0.44
Clrn1-202ENSMUST00000055636 Kdm5dQ62240 1548 aa12.31□□□□□ -0.44
Clrn1-202ENSMUST00000055636 Rb1cc1Q9ESK9 1588 aa12.26□□□□□ -0.45
Clrn1-202ENSMUST00000055636 Dcaf1Q80TR8 1506 aa12.22□□□□□ -0.45
Clrn1-202ENSMUST00000055636 NacadQ5SWP3 1504 aa12.17□□□□□ -0.46
Clrn1-202ENSMUST00000055636 Ccdc180J3QNE4 1664 aa12.17□□□□□ -0.46
Clrn1-202ENSMUST00000055636 Ccdc136Q3TVA9 1136 aa12.15□□□□□ -0.46
Clrn1-202ENSMUST00000055636 Baz1aO88379 1555 aa12.06□□□□□ -0.48
Clrn1-202ENSMUST00000055636 Rpgrip1Q9EPQ2 1331 aa12.05□□□□□ -0.48
Clrn1-202ENSMUST00000055636 Zcchc6Q5BLK4 1491 aaKnown RBP12.01□□□□□ -0.49
Clrn1-202ENSMUST00000055636 Sycp2Q9CUU3 1500 aa11.93□□□□□ -0.5
Clrn1-202ENSMUST00000055636 Acin1Q9JIX8 1338 aaKnown RBP11.83□□□□□ -0.52
Clrn1-202ENSMUST00000055636 Smarca2Q6DIC0 1577 aa11.76□□□□□ -0.53
Clrn1-202ENSMUST00000055636 Crybg2B7ZCC2 1516 aa11.75□□□□□ -0.53
Clrn1-202ENSMUST00000055636 BicraF8VPZ9 1578 aa11.73□□□□□ -0.53
Clrn1-202ENSMUST00000055636 Ehmt2Q9Z148 1263 aaKnown RBP11.7□□□□□ -0.54
Clrn1-202ENSMUST00000055636 Trim41Q5NCC3 630 aa11.69□□□□□ -0.54
Clrn1-202ENSMUST00000055636 Cecr2E9Q2Z1 1453 aa11.69□□□□□ -0.54
Clrn1-202ENSMUST00000055636 Cngb1E1AZ71 1325 aa11.6□□□□□ -0.55
Clrn1-202ENSMUST00000055636 Pcgf6Q99NA9 353 aa11.56□□□□□ -0.56
Clrn1-202ENSMUST00000055636 HrcG5E8J6 738 aa11.53□□□□□ -0.56
Clrn1-202ENSMUST00000055636 Esf1Q3V1V3 845 aaKnown RBP11.53□□□□□ -0.56
Clrn1-202ENSMUST00000055636 Brd4Q9ESU6 1400 aaKnown RBP11.5□□□□□ -0.57
Clrn1-202ENSMUST00000055636 Synj1Q8CHC4 1574 aa11.49□□□□□ -0.57
Clrn1-202ENSMUST00000055636 Chic1Q8CBW7 227 aa11.44□□□□□ -0.58
Clrn1-202ENSMUST00000055636 Gab3Q8BSM5 595 aa11.41□□□□□ -0.58
Clrn1-202ENSMUST00000055636 CftrP26361 1476 aa11.41□□□□□ -0.58
Clrn1-202ENSMUST00000055636 Smarca4Q3TKT4 1613 aaKnown RBP11.37□□□□□ -0.59
Clrn1-202ENSMUST00000055636 Rsf1E9PWW9 1441 aaKnown RBP11.35□□□□□ -0.59
Clrn1-202ENSMUST00000055636 Golga3P55937 1487 aa11.33□□□□□ -0.6
Clrn1-202ENSMUST00000055636 Ccdc88bQ4QRL3 1481 aa11.33□□□□□ -0.6
Clrn1-202ENSMUST00000055636 Supt5hO55201 1082 aaKnown RBP11.3□□□□□ -0.6
Clrn1-202ENSMUST00000055636 Cttnbp2B9EJA2 1648 aa11.3□□□□□ -0.6
Clrn1-202ENSMUST00000055636 Cep164Q5DU05 1446 aa11.29□□□□□ -0.6
Clrn1-202ENSMUST00000055636 Iqgap2Q3UQ44 1575 aa11.27□□□□□ -0.61
Clrn1-202ENSMUST00000055636 Atad2bE9Q166 1460 aaKnown RBP11.23□□□□□ -0.61
Clrn1-202ENSMUST00000055636 Pds5bQ4VA53 1446 aaKnown RBP11.22□□□□□ -0.61
Clrn1-202ENSMUST00000055636 Cc2d2aQ8CFW7 1633 aa11.19□□□□□ -0.62
Clrn1-202ENSMUST00000055636 Top2bQ64511 1612 aa11.17□□□□□ -0.62
Clrn1-202ENSMUST00000055636 Neurod1Q60867 357 aa11.15□□□□□ -0.62
Clrn1-202ENSMUST00000055636 Il27Q8K3I6 234 aa11.11□□□□□ -0.63
Clrn1-202ENSMUST00000055636 Frmpd1A2AKB4 1549 aa11.1□□□□□ -0.63
Clrn1-202ENSMUST00000055636 Wdr62Q3U3T8 1523 aa11.05□□□□□ -0.64
Clrn1-202ENSMUST00000055636 Ercc6F8VPZ5 1481 aa11.05□□□□□ -0.64
Clrn1-202ENSMUST00000055636 Myt1lP97500 1187 aa11.05□□□□□ -0.64
Clrn1-202ENSMUST00000055636 Fmn1Q05860 1466 aa11.04□□□□□ -0.64
Clrn1-202ENSMUST00000055636 Npm2Q80W85 207 aa11.01□□□□□ -0.65
Clrn1-202ENSMUST00000055636 Zeb1Q64318 1117 aa11.01□□□□□ -0.65
Clrn1-202ENSMUST00000055636 Kif15Q6P9L6 1387 aa11□□□□□ -0.65
Clrn1-202ENSMUST00000055636 Top2aQ01320 1528 aaKnown RBP10.95□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Ubl4bQ9CQ84 188 aa10.95□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Unc13aQ4KUS2 1712 aa10.95□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Dnajc5bQ9CQ94 199 aa10.93□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Ube2uB1AUC4 352 aa10.93□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Sall2Q9QX96 1004 aa10.92□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Rapgef2Q8CHG7 1496 aa10.92□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Mier1Q5UAK0 511 aa10.9□□□□□ -0.66
Clrn1-202ENSMUST00000055636 Thoc2B1AZI6 1594 aaKnown RBP10.89□□□□□ -0.67
Clrn1-202ENSMUST00000055636 NefmP08553 848 aa10.88□□□□□ -0.67
Clrn1-202ENSMUST00000055636 Phldb1Q6PDH0 1371 aaKnown RBP10.88□□□□□ -0.67
Clrn1-202ENSMUST00000055636 TnnQ80Z71 1560 aa10.87□□□□□ -0.67
Clrn1-202ENSMUST00000055636 Cep162Q6ZQ06 1403 aa10.86□□□□□ -0.67
Clrn1-202ENSMUST00000055636 Lamc3Q9R0B6 1581 aa10.86□□□□□ -0.67
Clrn1-202ENSMUST00000055636 PtprkP35822 1457 aa10.86□□□□□ -0.67
Clrn1-202ENSMUST00000055636 Las1lA2BE28 776 aaKnown RBP10.85□□□□□ -0.67
Clrn1-202ENSMUST00000055636 Cux2P70298 1426 aa10.83□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Npm1Q61937 292 aaKnown RBP10.83□□□□□ -0.68
Clrn1-202ENSMUST00000055636 UbtfP25976 765 aaKnown RBP10.82□□□□□ -0.68
Clrn1-202ENSMUST00000055636 1700123L14RikQ3V2K7 440 aa10.82□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Myt1Q8CFC2 1127 aa10.81□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Ap3b1Q9Z1T1 1105 aa10.8□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Camsap1A2AHC3 1581 aa10.79□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Csrnp3P59055 597 aa10.78□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Anks4bQ8K3X6 423 aa10.78□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Ccdc18Q640L5 1455 aa10.78□□□□□ -0.68
Clrn1-202ENSMUST00000055636 Plekhg3Q4VAC9 1341 aa10.77□□□□□ -0.69
Clrn1-202ENSMUST00000055636 Fam135aQ6NS59 1506 aa10.73□□□□□ -0.69
Clrn1-202ENSMUST00000055636 Arhgap35Q91YM2 1499 aa10.73□□□□□ -0.69
Clrn1-202ENSMUST00000055636 Clip1Q922J3 1391 aa10.72□□□□□ -0.69
Clrn1-202ENSMUST00000055636 Grin2bQ01097 1482 aa10.72□□□□□ -0.69
Clrn1-202ENSMUST00000055636 Aebp2Q9Z248 504 aaKnown RBP10.71□□□□□ -0.69
Clrn1-202ENSMUST00000055636 Shroom4Q1W617 1475 aa10.7□□□□□ -0.7
Clrn1-202ENSMUST00000055636 LrpprcQ6PB66 1392 aaKnown RBP10.68□□□□□ -0.7
Clrn1-202ENSMUST00000055636 Baz1bQ9Z277 1479 aa10.68□□□□□ -0.7
Clrn1-202ENSMUST00000055636 Eif4g1Q6NZJ6 1600 aaKnown RBP10.67□□□□□ -0.7
Clrn1-202ENSMUST00000055636 NrkQ9R0G8 1455 aa10.67□□□□□ -0.7
Clrn1-202ENSMUST00000055636 Wdr66E9Q743 1299 aa10.65□□□□□ -0.7
Clrn1-202ENSMUST00000055636 Dhx29Q6PGC1 1365 aaKnown RBP10.64□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Duox2A2AQ99 1517 aa10.63□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Setd5Q5XJV7 1441 aa10.62□□□□□ -0.71
Clrn1-202ENSMUST00000055636 PogzQ8BZH4 1409 aaKnown RBP10.62□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Ppargc1bQ8VHJ7 1014 aa10.6□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Mroh2bQ7M6Y6 1581 aa10.6□□□□□ -0.71
Clrn1-202ENSMUST00000055636 Rad54l2Q99NG0 1466 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 256 ms