RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ccdc146E9Q9F7 977 aa16.7■□□□□ 0.26
Nup88-201ENSMUST00000035283 Cdk19Q8BWD8 501 aa16.7■□□□□ 0.26
Nup88-201ENSMUST00000035283 DmtnQ9WV69 405 aa16.7■□□□□ 0.26
Nup88-201ENSMUST00000035283 Taok2Q6ZQ29 1240 aa16.69■□□□□ 0.26
Nup88-201ENSMUST00000035283 PogkQ80TC5 607 aa16.69■□□□□ 0.26
Nup88-201ENSMUST00000035283 Atp2b2Q9R0K7 1198 aa16.69■□□□□ 0.26
Nup88-201ENSMUST00000035283 Fchsd2Q3USJ8 740 aa16.68■□□□□ 0.26
Nup88-201ENSMUST00000035283 Rrp12Q6P5B0 1295 aaKnown RBP16.68■□□□□ 0.26
Nup88-201ENSMUST00000035283 Akap12Q9WTQ5 1684 aa16.68■□□□□ 0.26
Nup88-201ENSMUST00000035283 Birc3O08863 600 aa16.68■□□□□ 0.26
Nup88-201ENSMUST00000035283 Bag4Q8CI61 457 aa16.68■□□□□ 0.26
Nup88-201ENSMUST00000035283 Atp7bQ64446 1462 aa16.67■□□□□ 0.26
Nup88-201ENSMUST00000035283 Trim28Q62318 834 aa16.67■□□□□ 0.26
Nup88-201ENSMUST00000035283 EngaseQ8BX80 734 aa16.67■□□□□ 0.26
Nup88-201ENSMUST00000035283 Znf541Q0GGX2 1363 aa16.67■□□□□ 0.26
Nup88-201ENSMUST00000035283 Mcm10Q0VBD2 885 aa16.67■□□□□ 0.26
Nup88-201ENSMUST00000035283 Tmx3Q8BXZ1 456 aa16.67■□□□□ 0.26
Nup88-201ENSMUST00000035283 Casq1O09165 405 aa16.66■□□□□ 0.26
Nup88-201ENSMUST00000035283 Utp14aQ640M1 767 aaKnown RBP16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 U2surpQ6NV83 1029 aaKnown RBP16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 Klhdc4Q921I2 584 aa16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 Q9D9H8 365 aa16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 Usp16Q99LG0 825 aa16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 FanclQ9CR14 375 aa16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 Prrc2bQ7TPM1 1486 aaKnown RBP16.65■□□□□ 0.26
Nup88-201ENSMUST00000035283 Arhgap23Q69ZH9 1483 aa16.64■□□□□ 0.25
Nup88-201ENSMUST00000035283 Dhx16G3X8X0 1044 aaKnown RBP16.64■□□□□ 0.25
Nup88-201ENSMUST00000035283 Plin1Q8CGN5 517 aa16.64■□□□□ 0.25
Nup88-201ENSMUST00000035283 Rasa1E9PYG6 1038 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 1700010I14RikQ7TPG0 532 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 CenppQ9CZ92 286 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 Cabp2Q9JLK4 216 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 Knl1Q66JQ7 1612 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 Gnai1B2RSH2 354 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 Gnai3Q9DC51 354 aa16.63■□□□□ 0.25
Nup88-201ENSMUST00000035283 Ppip5k2Q6ZQB6 1129 aa16.62■□□□□ 0.25
Nup88-201ENSMUST00000035283 Atp10aO54827 1508 aa16.62■□□□□ 0.25
Nup88-201ENSMUST00000035283 Triml2E9PW10 424 aa16.62■□□□□ 0.25
Nup88-201ENSMUST00000035283 Eif4g2Q62448 906 aaKnown RBP16.62■□□□□ 0.25
Nup88-201ENSMUST00000035283 Ric3Q8BPM6 367 aa16.61■□□□□ 0.25
Nup88-201ENSMUST00000035283 Ppp6r3Q922D4 844 aa16.61■□□□□ 0.25
Nup88-201ENSMUST00000035283 Aifm3Q3TY86 605 aa16.61■□□□□ 0.25
Nup88-201ENSMUST00000035283 Smarca5Q91ZW3 1051 aaKnown RBP16.61■□□□□ 0.25
Nup88-201ENSMUST00000035283 Chmp4bQ9D8B3 224 aaKnown RBP16.61■□□□□ 0.25
Nup88-201ENSMUST00000035283 Usp32F8VPZ3 1604 aa16.61■□□□□ 0.25
Nup88-201ENSMUST00000035283 Aldh8a1Q8BH00 487 aa16.6■□□□□ 0.25
Nup88-201ENSMUST00000035283 Uhrf1bp1lA2RSJ4 1457 aa16.6■□□□□ 0.25
Nup88-201ENSMUST00000035283 Ddrgk1Q80WW9 315 aa16.59■□□□□ 0.25
Nup88-201ENSMUST00000035283 Erich6bQ9D4S6 220 aa16.59■□□□□ 0.25
Nup88-201ENSMUST00000035283 Anapc15-psA0A140T8L6 141 aa16.59■□□□□ 0.25
Nup88-201ENSMUST00000035283 Pdia3P27773 505 aaKnown RBP16.59■□□□□ 0.25
Nup88-201ENSMUST00000035283 Znf316Q6PGE4 1016 aa16.59■□□□□ 0.25
Nup88-201ENSMUST00000035283 PtprmP28828 1452 aa16.59■□□□□ 0.25
Nup88-201ENSMUST00000035283 Ppp1r15aP17564 657 aa16.58■□□□□ 0.25
Nup88-201ENSMUST00000035283 MarsQ68FL6 902 aaKnown RBP16.58■□□□□ 0.25
Nup88-201ENSMUST00000035283 Cgnl1Q6AW69 1298 aa16.58■□□□□ 0.25
Nup88-201ENSMUST00000035283 Map3k19E9Q3S4 1311 aa16.58■□□□□ 0.24
Nup88-201ENSMUST00000035283 Nucb1Q02819 459 aaKnown RBP16.57■□□□□ 0.24
Nup88-201ENSMUST00000035283 Clcn1Q64347 994 aa16.57■□□□□ 0.24
Nup88-201ENSMUST00000035283 Zkscan1Q8BGS3 561 aaKnown RBP16.57■□□□□ 0.24
Nup88-201ENSMUST00000035283 Gm9992B2RWK3 458 aa16.57■□□□□ 0.24
Nup88-201ENSMUST00000035283 Unc93aQ710D3 458 aa16.57■□□□□ 0.24
Nup88-201ENSMUST00000035283 1700019A02RikA0A087WPV9 146 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 Fam13aQ8BGI4 693 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 NgefQ8CHT1 710 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 Kif24Q6NWW5 1356 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 PtmaP26350 111 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 HnrnpuQ8VEK3 800 aaKnown RBP16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 Gcc1Q9D4H2 778 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 Erbb4Q61527 1308 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 NktrP30415 1453 aa16.56■□□□□ 0.24
Nup88-201ENSMUST00000035283 Zdhhc9P59268 364 aa16.55■□□□□ 0.24
Nup88-201ENSMUST00000035283 Cyp27a1Q9DBG1 533 aa16.55■□□□□ 0.24
Nup88-201ENSMUST00000035283 Dip2cE9PWR4 1557 aa16.55■□□□□ 0.24
Nup88-201ENSMUST00000035283 Rab11fip3Q8CHD8 1047 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 Gdpd2Q9ESM6 539 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 AdgbG3UZ78 1657 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 CltcQ68FD5 1675 aaKnown RBP16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 CalcaP70160 136 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 Rsph6aQ8CDR2 708 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 Rbm10Q99KG3 930 aaKnown RBP16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 Abca14E9Q8F8 1683 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 Arhgef28P97433 1693 aa16.54■□□□□ 0.24
Nup88-201ENSMUST00000035283 Cavin2Q63918 418 aaKnown RBP16.53■□□□□ 0.24
Nup88-201ENSMUST00000035283 Qser1A2BIE1 1698 aa16.53■□□□□ 0.24
Nup88-201ENSMUST00000035283 4931400O07RikQ9D4M5 137 aa16.53■□□□□ 0.24
Nup88-201ENSMUST00000035283 Pibf1E9Q6K3 756 aa16.52■□□□□ 0.24
Nup88-201ENSMUST00000035283 ImpactO55091 318 aa16.52■□□□□ 0.24
Nup88-201ENSMUST00000035283 Pdia4P08003 638 aaKnown RBP16.52■□□□□ 0.24
Nup88-201ENSMUST00000035283 Tm6sf1P58749 370 aa16.52■□□□□ 0.24
Nup88-201ENSMUST00000035283 Synj2Q9D2G5 1434 aa16.52■□□□□ 0.24
Nup88-201ENSMUST00000035283 AglF8VPN4 1532 aa16.52■□□□□ 0.23
Nup88-201ENSMUST00000035283 Chmp4cQ9D7F7 232 aa16.52■□□□□ 0.23
Nup88-201ENSMUST00000035283 Ripk4Q9ERK0 786 aa16.52■□□□□ 0.23
Nup88-201ENSMUST00000035283 Q9D2X8 372 aa16.51■□□□□ 0.23
Nup88-201ENSMUST00000035283 Mdc1Q5PSV9 1707 aa16.51■□□□□ 0.23
Nup88-201ENSMUST00000035283 RereQ80TZ9 1558 aa16.51■□□□□ 0.23
Nup88-201ENSMUST00000035283 Yeats2Q3TUF7 1407 aa16.51■□□□□ 0.23
Nup88-201ENSMUST00000035283 Atg4a-psA0A0G2JFS9 396 aa16.51■□□□□ 0.23
Nup88-201ENSMUST00000035283 Prkar2bP31324 416 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms