RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 IRX4P78413 519 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 SCAPQ12770 1279 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 DLG2Q15700 870 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 CST6Q15828 149 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 EFHC2Q5JST6 749 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 VPS36Q86VN1 386 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 TBC1D31Q96DN5 1066 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 SPON2Q9BUD6 331 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 PABPC3Q9H361 631 aaKnown RBP19.31■□□□□ 0.68
TRIM56-202ENST00000412507 NDFIP2Q9NV92 336 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 DNAI1Q9UI46 699 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 FZD10Q9ULW2 581 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 NEU3Q9UQ49 428 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 CACNA1AO00555 2505 aa19.31■□□□□ 0.68
TRIM56-202ENST00000412507 SPTBN2O15020 2390 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 ANKRD36A6QL64 1941 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 LNP1A1A4G5 178 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 TMEM191CA6NGB0 347 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 MEI4A8MW99 385 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 SRCP12931 536 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 RHOQP17081 205 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 PSMD8P48556 350 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 GNA12Q03113 381 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 ZNF252P-AS1Q0IIN9 211 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 SYCP2LQ5T4T6 812 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 DCAF12L1Q5VU92 463 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 ZNF783Q6ZMS7 281 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 NLRP14Q86W24 1093 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 DCAF4L2Q8NA75 395 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 CADM4Q8NFZ8 388 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 GANCQ8TET4 914 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 TRIM11Q96F44 468 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 EDEM2Q9BV94 578 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 TRIM7Q9C029 511 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 ATP13A1Q9HD20 1204 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 FBXL12Q9NXK8 326 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 EVLQ9UI08 416 aaPredicted RBP19.3■□□□□ 0.68
TRIM56-202ENST00000412507 SCML1Q9UN30 329 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 HS3ST2Q9Y278 367 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 NCKAP1Q9Y2A7 1128 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 SCINQ9Y6U3 715 aa19.3■□□□□ 0.68
TRIM56-202ENST00000412507 A0A087X0T9 212 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 K7ERQ8 282 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 CBX4O00257 560 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 SLC30A4O14863 429 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 BNIP3LO60238 219 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 CFIP05156 583 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 FAM228BP0C875 321 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 L1CAMP32004 1257 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 SLC8A1P32418 973 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 HOXD12P35452 270 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 ELAVL3Q14576 367 aaKnown RBP19.29■□□□□ 0.68
TRIM56-202ENST00000412507 DUOXA1Q1HG43 343 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 WDR45BQ5MNZ6 344 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 STPG1Q5TH74 334 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 SPECC1LQ69YQ0 1117 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 SLC23A3Q6PIS1 610 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 LINGO4Q6UY18 593 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 Q6ZVU0 165 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 USP30Q70CQ3 517 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 ATP11CQ8NB49 1132 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 RTKNQ9BST9 563 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 NUSAP1Q9BXS6 441 aaKnown RBP19.29■□□□□ 0.68
TRIM56-202ENST00000412507 BTBD1Q9H0C5 482 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 C6orf106Q9H6K1 298 aaPredicted RBP19.29■□□□□ 0.68
TRIM56-202ENST00000412507 TMEM248Q9NWD8 314 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 ARHGAP20Q9P2F6 1191 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 SERGEFQ9UGK8 458 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 SHROOM3Q8TF72 1996 aa19.29■□□□□ 0.68
TRIM56-202ENST00000412507 A0A1W2PP55 124 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 METTL12A8MUP2 240 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 SMAD6O43541 496 aaKnown RBP19.28■□□□□ 0.68
TRIM56-202ENST00000412507 CREB3O43889 395 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 SEMA4FO95754 770 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 IL1BP01584 269 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 MYBL1P10243 752 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 ACVRL1P37023 503 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 MAPKAPK2P49137 400 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 LIMK1P53667 647 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 AIF1P55008 147 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 VSTM4Q8IW00 320 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 ARFGAP1Q8N6T3 406 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 CEP76Q8TAP6 659 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 OR8D1Q8WZ84 308 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 OMDQ99983 421 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 RETREG1Q9H6L5 497 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 SGK2Q9HBY8 427 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 MRPL47Q9HD33 250 aaKnown RBP19.28■□□□□ 0.68
TRIM56-202ENST00000412507 FSCN3Q9NQT6 498 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 GPATCH2LQ9NWQ4 482 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 PCSK1NQ9UHG2 260 aa19.28■□□□□ 0.68
TRIM56-202ENST00000412507 DCDC2BA2VCK2 349 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 RNASEH2AO75792 299 aaKnown RBP19.27■□□□□ 0.68
TRIM56-202ENST00000412507 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 RNF8O76064 485 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 ADH1BP00325 375 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 EPHB2P29323 1055 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 SFSWAPQ12872 951 aaKnown RBP19.27■□□□□ 0.68
TRIM56-202ENST00000412507 SEMA3BQ13214 749 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 IL31Q6EBC2 164 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms