RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 CDC4P07834 779 aa3.48□□□□□ -1.85
snR43snR43 RET1P22276 1149 aaKnown RBP3.48□□□□□ -1.85
snR43snR43 SHC1P39000 512 aa3.48□□□□□ -1.85
snR43snR43 RIM21P48565 533 aa3.48□□□□□ -1.85
snR43snR43 YPL062WQ02781 134 aa3.48□□□□□ -1.85
snR43snR43 YLR278CQ05854 1341 aa3.47□□□□□ -1.85
snR43snR43 RDS2P19541 446 aaKnown RBP3.47□□□□□ -1.85
snR43snR43 GUT2P32191 649 aa3.47□□□□□ -1.85
snR43snR43 SMY1P32364 656 aaKnown RBP3.47□□□□□ -1.85
snR43snR43 YBP2P53169 641 aa3.47□□□□□ -1.85
snR43snR43 NAF1P53919 492 aaKnown RBP3.47□□□□□ -1.85
snR43snR43 ERO1Q03103 563 aa3.47□□□□□ -1.85
snR43snR43 HED1Q03937 162 aa3.47□□□□□ -1.85
snR43snR43 ATG20Q07528 640 aa3.47□□□□□ -1.85
snR43snR43 RIM15P43565 1770 aa3.47□□□□□ -1.85
snR43snR43 NUP145P49687 1317 aa3.46□□□□□ -1.85
snR43snR43 SPT5P27692 1063 aaKnown RBP3.46□□□□□ -1.86
snR43snR43 ASH1P34233 588 aa3.46□□□□□ -1.86
snR43snR43 SOH1P38633 127 aa3.46□□□□□ -1.86
snR43snR43 CTF4Q01454 927 aa3.46□□□□□ -1.86
snR43snR43 FRA1Q07825 749 aa3.46□□□□□ -1.86
snR43snR43 RLF2Q12495 606 aa3.46□□□□□ -1.86
snR43snR43 THS1P04801 734 aaKnown RBP3.45□□□□□ -1.86
snR43snR43 HAL5P38970 855 aaKnown RBP3.45□□□□□ -1.86
snR43snR43 MDG1P53885 366 aa3.45□□□□□ -1.86
snR43snR43 MRX10Q05648 414 aa3.45□□□□□ -1.86
snR43snR43 ISR1Q06098 443 aaKnown RBP3.45□□□□□ -1.86
snR43snR43 CTI6Q08923 506 aa3.45□□□□□ -1.86
snR43snR43 TOP1P04786 769 aa3.44□□□□□ -1.86
snR43snR43 LPD1P09624 499 aaKnown RBP3.44□□□□□ -1.86
snR43snR43 ICL1P28240 557 aaPredicted RBP3.44□□□□□ -1.86
snR43snR43 TTI1P36097 1038 aa3.44□□□□□ -1.86
snR43snR43 YIL089WP40500 205 aa3.44□□□□□ -1.86
snR43snR43 DSD1P53095 428 aa3.44□□□□□ -1.86
snR43snR43 HST3P53687 447 aa3.44□□□□□ -1.86
snR43snR43 RAT1Q02792 1006 aaKnown RBP3.44□□□□□ -1.86
snR43snR43 DFG5Q05031 458 aa3.44□□□□□ -1.86
snR43snR43 HIM1Q06674 414 aa3.44□□□□□ -1.86
snR43snR43 DIB1Q06819 143 aaPredicted RBP3.44□□□□□ -1.86
snR43snR43 PHM7Q12252 991 aa3.44□□□□□ -1.86
snR43snR43 SRF1Q12516 437 aa3.44□□□□□ -1.86
snR43snR43 MIP1P15801 1254 aa3.43□□□□□ -1.86
snR43snR43 GAR1P28007 205 aaKnown RBP3.43□□□□□ -1.86
snR43snR43 YKU70P32807 602 aa3.43□□□□□ -1.86
snR43snR43 MKS1P34072 584 aa3.43□□□□□ -1.86
snR43snR43 MAC1P35192 417 aa3.43□□□□□ -1.86
snR43snR43 EMW1P42842 904 aaKnown RBP3.43□□□□□ -1.86
snR43snR43 BUD27P43573 796 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
snR43snR43 RMT2Q03305 412 aa3.43□□□□□ -1.86
snR43snR43 YML083CQ04526 418 aa3.43□□□□□ -1.86
snR43snR43 BDF2Q07442 638 aa3.43□□□□□ -1.86
snR43snR43 UGA3P26370 528 aa3.42□□□□□ -1.86
snR43snR43 MET22P32179 357 aa3.42□□□□□ -1.86
snR43snR43 YFR016CP43597 1233 aaKnown RBP3.42□□□□□ -1.86
snR43snR43 CBC2Q08920 208 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
snR43snR43 GRX6Q12438 231 aa3.42□□□□□ -1.86
snR43snR43 HSP104P31539 908 aaKnown RBP3.41□□□□□ -1.86
snR43snR43 MRT4P33201 236 aaKnown RBP3.41□□□□□ -1.86
snR43snR43 YPP1P46951 817 aa3.41□□□□□ -1.86
snR43snR43 YJR115WP47152 169 aa3.41□□□□□ -1.86
snR43snR43 ORC1P54784 914 aaPredicted RBP3.41□□□□□ -1.86
snR43snR43 ECM23Q02710 187 aa3.41□□□□□ -1.86
snR43snR43 IRC3Q06683 689 aa3.41□□□□□ -1.86
snR43snR43 TIF6Q12522 245 aaKnown RBP3.41□□□□□ -1.86
snR43snR43 DAT1P13483 248 aaKnown RBP3.4□□□□□ -1.87
snR43snR43 AFT1P22149 690 aa3.4□□□□□ -1.87
snR43snR43 MSM1P22438 575 aa3.4□□□□□ -1.87
snR43snR43 PEP12P32854 288 aa3.4□□□□□ -1.87
snR43snR43 SER1P33330 395 aaKnown RBP3.4□□□□□ -1.87
snR43snR43 TGL4P36165 910 aa3.4□□□□□ -1.87
snR43snR43 PEA2P40091 420 aa3.4□□□□□ -1.87
snR43snR43 FET4P40988 552 aa3.4□□□□□ -1.87
snR43snR43 APL6P46682 809 aa3.4□□□□□ -1.87
snR43snR43 TIM50Q02776 476 aa3.4□□□□□ -1.87
snR43snR43 UBP16Q02863 499 aa3.4□□□□□ -1.87
snR43snR43 AOS1Q06624 347 aa3.4□□□□□ -1.87
snR43snR43 NOB1Q08444 459 aaKnown RBP3.4□□□□□ -1.87
snR43snR43 FIG2P25653 1609 aa3.4□□□□□ -1.87
snR43snR43 VPS13Q07878 3144 aa3.39□□□□□ -1.87
snR43snR43 HVG1P0CE11 249 aa3.39□□□□□ -1.87
snR43snR43 CAF20P12962 161 aaKnown RBP3.39□□□□□ -1.87
snR43snR43 PUP1P25043 261 aa3.39□□□□□ -1.87
snR43snR43 KCC4P25389 1037 aa3.39□□□□□ -1.87
snR43snR43 GBP2P25555 427 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
snR43snR43 FBP26P32604 452 aa3.39□□□□□ -1.87
snR43snR43 DLD1P32891 587 aa3.39□□□□□ -1.87
snR43snR43 AKL1P38080 1108 aaKnown RBP3.39□□□□□ -1.87
snR43snR43 UTP7P40055 554 aaKnown RBP3.39□□□□□ -1.87
snR43snR43 YGL082WP53155 381 aa3.39□□□□□ -1.87
snR43snR43 YGR117CP53270 476 aa3.39□□□□□ -1.87
snR43snR43 ISU1Q03020 165 aa3.39□□□□□ -1.87
snR43snR43 HDA3Q06623 655 aa3.39□□□□□ -1.87
snR43snR43 SSP2Q08646 371 aa3.39□□□□□ -1.87
snR43snR43 SSK22P25390 1331 aaPredicted RBP3.39□□□□□ -1.87
snR43snR43 KAR2P16474 682 aaKnown RBP3.38□□□□□ -1.87
snR43snR43 UTR2P32623 467 aa3.38□□□□□ -1.87
snR43snR43 UBX7P38349 436 aa3.38□□□□□ -1.87
snR43snR43 BSD2P38356 321 aa3.38□□□□□ -1.87
snR43snR43 PTK2P47116 818 aaKnown RBP3.38□□□□□ -1.87
snR43snR43 ACS2P52910 683 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms