RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W RPS9BP05755 195 aaKnown RBP6.72□□□□□ -1.33
RPN7YPR108W AMS1P22855 1083 aa6.72□□□□□ -1.33
RPN7YPR108W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
RPN7YPR108W APL2P36000 726 aaPredicted RBP6.72□□□□□ -1.33
RPN7YPR108W MIC60P36112 540 aa6.72□□□□□ -1.33
RPN7YPR108W MET1P36150 593 aa6.72□□□□□ -1.33
RPN7YPR108W UGA2P38067 497 aa6.72□□□□□ -1.33
RPN7YPR108W PCS60P38137 543 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33 RIP-Chip
RPN7YPR108W BUD6P41697 788 aa6.72□□□□□ -1.33
RPN7YPR108W HPC2Q01448 625 aa6.72□□□□□ -1.33
RPN7YPR108W LCD1Q04377 747 aa6.72□□□□□ -1.33
RPN7YPR108W YMR074CQ04773 145 aa6.72□□□□□ -1.33
RPN7YPR108W MPC54Q08550 464 aa6.72□□□□□ -1.33
RPN7YPR108W NYV1Q12255 253 aa6.72□□□□□ -1.33
RPN7YPR108W YPR015CQ12531 247 aa6.72□□□□□ -1.33
RPN7YPR108W ASF1P32447 279 aa6.71□□□□□ -1.34
RPN7YPR108W YKR075CP36155 307 aa6.71□□□□□ -1.34
RPN7YPR108W AAP1P37898 856 aaKnown RBP6.71□□□□□ -1.34
RPN7YPR108W IOC3P43596 787 aa6.71□□□□□ -1.34
RPN7YPR108W TUM1Q08686 304 aaKnown RBP6.71□□□□□ -1.34
RPN7YPR108W DPH6Q12429 685 aa6.71□□□□□ -1.34
RPN7YPR108W PES4P39684 611 aa6.7□□□□□ -1.34
RPN7YPR108W SLN1P39928 1220 aaPredicted RBP6.7□□□□□ -1.34
RPN7YPR108W RPN11P43588 306 aaKnown RBP6.7□□□□□ -1.34
RPN7YPR108W ALO1P54783 526 aaKnown RBP6.7□□□□□ -1.34
RPN7YPR108W YDR090CQ03193 310 aa6.7□□□□□ -1.34
RPN7YPR108W RMD1Q03441 430 aa6.7□□□□□ -1.34
RPN7YPR108W SYF1Q04048 859 aaPredicted RBP6.7□□□□□ -1.34
RPN7YPR108W SPN1Q06505 410 aaPredicted RBP6.7□□□□□ -1.34
RPN7YPR108W TAH18Q12181 623 aa6.7□□□□□ -1.34
RPN7YPR108W PGI1P12709 554 aaKnown RBP6.69□□□□□ -1.34
RPN7YPR108W ARG8P18544 423 aa6.69□□□□□ -1.34
RPN7YPR108W SEC18P18759 758 aaKnown RBP6.69□□□□□ -1.34
RPN7YPR108W PEP3P27801 918 aa6.69□□□□□ -1.34
RPN7YPR108W SEC20P28791 383 aa6.69□□□□□ -1.34
RPN7YPR108W CRG1P38892 291 aaRIP-Chip data6.69□□□□□ -1.34not detected
RPN7YPR108W HXT13P39924 564 aa6.69□□□□□ -1.34
RPN7YPR108W CCT5P40413 562 aaKnown RBP6.69□□□□□ -1.34
RPN7YPR108W DJP1P40564 432 aa6.69□□□□□ -1.34
RPN7YPR108W IRC8P47046 822 aa6.69□□□□□ -1.34
RPN7YPR108W VPS20Q04272 221 aa6.69□□□□□ -1.34
RPN7YPR108W ELG1Q12050 791 aa6.69□□□□□ -1.34
RPN7YPR108W RPL22AP05749 121 aaKnown RBP6.68□□□□□ -1.34
RPN7YPR108W SPC110P32380 944 aa6.68□□□□□ -1.34
RPN7YPR108W RPN12P32496 274 aa6.68□□□□□ -1.34
RPN7YPR108W ELM1P32801 640 aa6.68□□□□□ -1.34
RPN7YPR108W RAD54P32863 898 aa6.68□□□□□ -1.34
RPN7YPR108W CAB3P36076 571 aa6.68□□□□□ -1.34
RPN7YPR108W REF2P42073 533 aaPredicted RBP6.68□□□□□ -1.34
RPN7YPR108W MRPS35P53292 345 aa6.68□□□□□ -1.34
RPN7YPR108W SAS4Q04003 481 aa6.68□□□□□ -1.34
RPN7YPR108W CDC73Q06697 393 aa6.68□□□□□ -1.34
RPN7YPR108W BDF2Q07442 638 aa6.68□□□□□ -1.34
RPN7YPR108W CLF1Q12309 687 aaPredicted RBP6.68□□□□□ -1.34
RPN7YPR108W NBL1Q3E7Y6 73 aa6.68□□□□□ -1.34
RPN7YPR108W ADR1P07248 1323 aa6.68□□□□□ -1.34
RPN7YPR108W POM152P39685 1337 aa6.68□□□□□ -1.34
RPN7YPR108W SPB4P25808 606 aaPredicted RBP6.67□□□□□ -1.34
RPN7YPR108W PRX1P34227 261 aaKnown RBP6.67□□□□□ -1.34
RPN7YPR108W RTC4P53850 401 aa6.67□□□□□ -1.34
RPN7YPR108W NMA111P53920 997 aa6.67□□□□□ -1.34
RPN7YPR108W DPL1Q05567 589 aa6.67□□□□□ -1.34
RPN7YPR108W YIL177CP40434 1758 aa6.67□□□□□ -1.34
RPN7YPR108W YJL225CP40889 1758 aa6.67□□□□□ -1.34
RPN7YPR108W JJJ2P46997 583 aa6.66□□□□□ -1.34
RPN7YPR108W HXT17P53631 564 aa6.66□□□□□ -1.34
RPN7YPR108W HRQ1Q05549 1077 aa6.66□□□□□ -1.34
RPN7YPR108W MRD1Q06106 887 aaKnown RBP6.66□□□□□ -1.34
RPN7YPR108W EST2Q06163 884 aa6.66□□□□□ -1.34
RPN7YPR108W CEX1Q12453 761 aa6.66□□□□□ -1.34
RPN7YPR108W YRF1-3P0CX14 1859 aa6.66□□□□□ -1.34
RPN7YPR108W YRF1-7P0CX15 1859 aa6.66□□□□□ -1.34
RPN7YPR108W YRF1-6P53819 1859 aa6.66□□□□□ -1.34
RPN7YPR108W TRL1P09880 827 aaKnown RBP6.65□□□□□ -1.34
RPN7YPR108W MATALPHA2P0CY08 210 aa6.65□□□□□ -1.34
RPN7YPR108W HMLALPHA2P0CY09 210 aa6.65□□□□□ -1.34
RPN7YPR108W SIT4P20604 311 aa6.65□□□□□ -1.34
RPN7YPR108W NGR1P32831 672 aaKnown RBP6.65□□□□□ -1.34
RPN7YPR108W YGL081WP53156 320 aa6.65□□□□□ -1.34
RPN7YPR108W PEX19Q07418 342 aa6.65□□□□□ -1.34
RPN7YPR108W PFK2P16862 959 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RPN7YPR108W CBP3P21560 335 aa6.64□□□□□ -1.35
RPN7YPR108W IMP2'P32351 346 aa6.64□□□□□ -1.35
RPN7YPR108W YKT6P36015 200 aaKnown RBP6.64□□□□□ -1.35
RPN7YPR108W BOI1P38041 980 aaKnown RBP6.64□□□□□ -1.35
RPN7YPR108W MAL31P38156 614 aa6.64□□□□□ -1.35
RPN7YPR108W PFF1P38244 976 aa6.64□□□□□ -1.35
RPN7YPR108W RRM3P38766 723 aa6.64□□□□□ -1.35
RPN7YPR108W PIP2P52960 996 aa6.64□□□□□ -1.35
RPN7YPR108W FBP26P32604 452 aa6.63□□□□□ -1.35
RPN7YPR108W CIC1P38779 376 aaKnown RBP6.63□□□□□ -1.35
RPN7YPR108W AIM9P40053 627 aaKnown RBP6.63□□□□□ -1.35
RPN7YPR108W RSC1P53236 928 aa6.63□□□□□ -1.35
RPN7YPR108W YNL193WP53870 558 aa6.63□□□□□ -1.35
RPN7YPR108W FCP1Q03254 732 aa6.63□□□□□ -1.35
RPN7YPR108W YPL150WQ12152 901 aa6.63□□□□□ -1.35
RPN7YPR108W GRX6Q12438 231 aa6.63□□□□□ -1.35
RPN7YPR108W SDH2P21801 266 aa6.62□□□□□ -1.35
RPN7YPR108W BMH2P34730 273 aaKnown RBP6.62□□□□□ -1.35
RPN7YPR108W RVS167P39743 482 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms