RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	YGL081W	P53156	320 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	ASI1	P54074	624 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	ELP4	Q02884	456 aa	Known RBP	4.19	□□□□□ -1.74
ABP140	YOR239W	YDR338C	Q05497	695 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	ATG9	Q12142	997 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	DRS2	P39524	1355 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	RAV1	P47104	1357 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	STE11	P23561	717 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	CDC10	P25342	322 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	DID4	P36108	232 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	SHC1	P39000	512 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	RTF1	P53064	558 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	YNL247W	P53852	767 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	TIM11	P81449	96 aa	Predicted RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	SSL2	Q00578	843 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	VPS20	Q04272	221 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	KRE28	Q04431	385 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	YDR341C	Q05506	607 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	RSA3	Q05942	220 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	OMS1	Q06668	471 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	UTP4	Q06679	776 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	NOC3	Q07896	663 aa	Predicted RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	TY4A-H	Q6Q5P6	413 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	SAC3	P46674	1301 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-LR1	P0C2J3	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-F	P0CX63	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-GR2	P0CX64	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-C	P25384	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-DR2	Q03494	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY1B-DR1	Q03855	1755 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-OR1	Q12113	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-DR1	Q12472	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	TY2B-OR2	Q12501	1770 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	YRF1-4	O13559	1382 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	SES1	P07284	462 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	BIK1	P11709	440 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	DLD1	P32891	587 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	ORM1	P53224	222 aa		4.18	□□□□□ -1.74
ABP140	YOR239W	CUS1	Q02554	436 aa	Predicted RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	TSR1	Q07381	788 aa	Known RBP	4.18	□□□□□ -1.74
ABP140	YOR239W	KRS1	P15180	591 aa	Known RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	CDC48	P25694	835 aa	Known RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	CDC60	P26637	1090 aa	Known RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	BRL1	P38770	471 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	SPT8	P38915	602 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	YIR042C	P40586	236 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	SAP155	P43612	1002 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	ALD4	P46367	519 aa	Known RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	BTN2	P53286	410 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	SYH1	Q02875	849 aa	Known RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	YML119W	Q03208	357 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	CHS5	Q12114	671 aa	Known RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	CLF1	Q12309	687 aa	Predicted RBP	4.17	□□□□□ -1.74
ABP140	YOR239W	PDR18	P53756	1333 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	LYS2	P07702	1392 aa		4.17	□□□□□ -1.74
ABP140	YOR239W	PRP16	P15938	1071 aa	Predicted RBP	4.16	□□□□□ -1.74
ABP140	YOR239W	KTR1	P27810	393 aa	Known RBP	4.16	□□□□□ -1.74
ABP140	YOR239W	SEC20	P28791	383 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	MET4	P32389	672 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	SEC66	P33754	206 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	YEL1	P34225	687 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	LHS1	P36016	881 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	TTI1	P36097	1038 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	SRL3	P36167	246 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	VID28	P40547	921 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	ILM1	P47155	203 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	GCR2	Q01722	534 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	FMP30	Q02883	468 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	RRP9	Q06506	573 aa	Known RBP	4.16	□□□□□ -1.74
ABP140	YOR239W	CDC73	Q06697	393 aa		4.16	□□□□□ -1.74
ABP140	YOR239W	TRL1	P09880	827 aa	Known RBP	4.15	□□□□□ -1.74
ABP140	YOR239W	PMR1	P13586	950 aa		4.15	□□□□□ -1.74
ABP140	YOR239W	YEF3	P16521	1044 aa	Known RBP	4.15	□□□□□ -1.74
ABP140	YOR239W	SWC3	P31376	625 aa		4.15	□□□□□ -1.74
ABP140	YOR239W	RME1	P32338	300 aa	Known RBP	4.15	□□□□□ -1.74
ABP140	YOR239W	TFC3	P34111	1160 aa		4.15	□□□□□ -1.74
ABP140	YOR239W	KDX1	P36005	433 aa		4.15	□□□□□ -1.74
ABP140	YOR239W	MUD2	P36084	527 aa	Known RBP	4.15	□□□□□ -1.74
ABP140	YOR239W	MID1	P41821	548 aa		4.15	□□□□□ -1.74
ABP140	YOR239W	EIS1	Q05050	843 aa	Known RBP	4.15	□□□□□ -1.74
ABP140	YOR239W	APC2	Q12440	853 aa		4.15	□□□□□ -1.74
ABP140	YOR239W	TRK1	P12685	1235 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	ATE1	P16639	503 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	FAR1	P21268	830 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	CLB4	P24871	460 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	BUD14	P27637	709 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	SCT1	P32784	759 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	CSE1	P33307	960 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	ATG14	P38270	344 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	KIC1	P38692	1080 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	SEC27	P41811	889 aa	Known RBP	4.15	□□□□□ -1.75
ABP140	YOR239W	CTH1	P47976	325 aa		4.15	□□□□□ -1.75
ABP140	YOR239W	MLP1	Q02455	1875 aa	Known RBP	4.15	□□□□□ -1.75
ABP140	YOR239W	YRF1-1	P0CX20	1796 aa		4.14	□□□□□ -1.75
ABP140	YOR239W	YRF1-5	P0CX21	1796 aa		4.14	□□□□□ -1.75
ABP140	YOR239W	YRF1-8	P0CX22	1796 aa		4.14	□□□□□ -1.75
ABP140	YOR239W	TY1B-DR3	Q99231	1755 aa		4.14	□□□□□ -1.75
ABP140	YOR239W	PRT1	P06103	763 aa	Known RBP	4.14	□□□□□ -1.75
ABP140	YOR239W	SUI3	P09064	285 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms