RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W ULI1P43604 169 aa5.5□□□□□ -1.53
SOF1YLL011W YJR115WP47152 169 aa5.5□□□□□ -1.53
SOF1YLL011W ITC1P53125 1264 aa5.5□□□□□ -1.53
SOF1YLL011W YNR029CP53729 429 aaKnown RBP5.5□□□□□ -1.53
SOF1YLL011W MDG1P53885 366 aa5.5□□□□□ -1.53
SOF1YLL011W APP1P53933 587 aa5.5□□□□□ -1.53
SOF1YLL011W LDB19Q12502 818 aa5.5□□□□□ -1.53
SOF1YLL011W VMA3P25515 160 aa5.49□□□□□ -1.53
SOF1YLL011W PAT1P25644 796 aaKnown RBP5.49□□□□□ -1.53
SOF1YLL011W MCM5P29496 775 aaKnown RBP5.49□□□□□ -1.53
SOF1YLL011W UGA4P32837 571 aa5.49□□□□□ -1.53
SOF1YLL011W TBS1P38114 1094 aa5.49□□□□□ -1.53
SOF1YLL011W YBR184WP38299 523 aa5.49□□□□□ -1.53
SOF1YLL011W RAD55P38953 406 aa5.49□□□□□ -1.53
SOF1YLL011W HAP5Q02516 242 aa5.49□□□□□ -1.53
SOF1YLL011W YCS4Q06156 1176 aa5.49□□□□□ -1.53
SOF1YLL011W REV3P14284 1504 aa5.49□□□□□ -1.53
SOF1YLL011W RPA135P22138 1203 aaKnown RBP5.48□□□□□ -1.53
SOF1YLL011W MRC1P25588 1096 aa5.48□□□□□ -1.53
SOF1YLL011W YNL035CP53962 389 aaKnown RBP5.48□□□□□ -1.53
SOF1YLL011W ISU1Q03020 165 aa5.48□□□□□ -1.53
SOF1YLL011W OSH2Q12451 1283 aa5.48□□□□□ -1.53
SOF1YLL011W GCR1P07261 785 aa5.47□□□□□ -1.53
SOF1YLL011W RPL8AP17076 256 aaKnown RBP5.47□□□□□ -1.53
SOF1YLL011W STE5P32917 917 aa5.47□□□□□ -1.53
SOF1YLL011W SCD5P34758 872 aa5.47□□□□□ -1.53
SOF1YLL011W FUI1P38196 639 aa5.47□□□□□ -1.53
SOF1YLL011W PAF1P38351 445 aa5.47□□□□□ -1.53
SOF1YLL011W PEX8P53248 589 aa5.47□□□□□ -1.53
SOF1YLL011W YPL109CQ02981 657 aa5.47□□□□□ -1.53
SOF1YLL011W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
SOF1YLL011W SPO75Q07798 868 aa5.47□□□□□ -1.53
SOF1YLL011W NTG2Q08214 380 aa5.47□□□□□ -1.53
SOF1YLL011W CAN1P04817 590 aa5.46□□□□□ -1.53
SOF1YLL011W PRT1P06103 763 aaKnown RBP5.46□□□□□ -1.53
SOF1YLL011W EMW1P42842 904 aaKnown RBP5.46□□□□□ -1.53
SOF1YLL011W EEB1Q02891 456 aa5.46□□□□□ -1.53
SOF1YLL011W RTT10Q08924 1013 aa5.46□□□□□ -1.53
SOF1YLL011W TIF6Q12522 245 aaKnown RBP5.46□□□□□ -1.53
SOF1YLL011W PEP1P32319 1579 aa5.46□□□□□ -1.54
SOF1YLL011W KAR2P16474 682 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W HSP60P19882 572 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W VMA4P22203 233 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W PWP2P25635 923 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W RPL8BP29453 256 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W SFP1P32432 683 aa5.45□□□□□ -1.54
SOF1YLL011W FBP26P32604 452 aa5.45□□□□□ -1.54
SOF1YLL011W VPS24P36095 224 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W LDH1P38139 375 aa5.45□□□□□ -1.54
SOF1YLL011W PIC2P40035 300 aa5.45□□□□□ -1.54
SOF1YLL011W RGD2P43556 714 aa5.45□□□□□ -1.54
SOF1YLL011W CEF1Q03654 590 aaPredicted RBP5.45□□□□□ -1.54
SOF1YLL011W YPQ2Q06328 317 aa5.45□□□□□ -1.54
SOF1YLL011W WTM2Q12206 467 aa5.45□□□□□ -1.54
SOF1YLL011W TMA17Q12513 150 aa5.45□□□□□ -1.54
SOF1YLL011W XRN1P22147 1528 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W CIT1P00890 479 aa5.45□□□□□ -1.54
SOF1YLL011W FLP1P03870 423 aa5.45□□□□□ -1.54
SOF1YLL011W THS1P04801 734 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W MOD5P07884 428 aa5.45□□□□□ -1.54
SOF1YLL011W MCM1P11746 286 aa5.45□□□□□ -1.54
SOF1YLL011W TRX2P22803 104 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W MSH2P25847 964 aa5.45□□□□□ -1.54
SOF1YLL011W SPT16P32558 1035 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W GGA2P38817 585 aaKnown RBP5.45□□□□□ -1.54
SOF1YLL011W ERP2P39704 215 aa5.45□□□□□ -1.54
SOF1YLL011W BOI2P39969 1040 aa5.45□□□□□ -1.54
SOF1YLL011W PSY2P40164 858 aa5.45□□□□□ -1.54
SOF1YLL011W NTA1P40354 457 aa5.45□□□□□ -1.54
SOF1YLL011W ULP1Q02724 621 aa5.45□□□□□ -1.54
SOF1YLL011W ADI1Q03677 179 aa5.45□□□□□ -1.54
SOF1YLL011W MKS1P34072 584 aa5.44□□□□□ -1.54
SOF1YLL011W IRS4P36115 615 aaKnown RBP5.44□□□□□ -1.54
SOF1YLL011W FIR1P40020 876 aa5.44□□□□□ -1.54
SOF1YLL011W UTP7P40055 554 aaKnown RBP5.44□□□□□ -1.54
SOF1YLL011W MON1P53129 644 aa5.44□□□□□ -1.54
SOF1YLL011W SPO20Q04359 397 aa5.44□□□□□ -1.54
SOF1YLL011W TMA64Q04600 565 aaKnown RBP5.44□□□□□ -1.54
SOF1YLL011W ESC2Q06340 456 aa5.44□□□□□ -1.54
SOF1YLL011W MRL1Q06815 381 aa5.44□□□□□ -1.54
SOF1YLL011W YOR378WQ08902 515 aa5.44□□□□□ -1.54
SOF1YLL011W IOC2Q12072 812 aa5.44□□□□□ -1.54
SOF1YLL011W MSN1P22148 382 aa5.43□□□□□ -1.54
SOF1YLL011W YJR120WP47157 116 aa5.43□□□□□ -1.54
SOF1YLL011W HLJ1P48353 224 aa5.43□□□□□ -1.54
SOF1YLL011W TFB2Q02939 513 aa5.43□□□□□ -1.54
SOF1YLL011W ATG13Q06628 738 aa5.43□□□□□ -1.54
SOF1YLL011W FMP25Q08023 583 aa5.43□□□□□ -1.54
SOF1YLL011W YPR015CQ12531 247 aa5.43□□□□□ -1.54
SOF1YLL011W ARE1P25628 610 aa5.42□□□□□ -1.54
SOF1YLL011W RTG1P32607 177 aa5.42□□□□□ -1.54
SOF1YLL011W DYS1P38791 387 aa5.42□□□□□ -1.54
SOF1YLL011W NIT1P40447 199 aa5.42□□□□□ -1.54
SOF1YLL011W QDR2P40474 542 aa5.42□□□□□ -1.54
SOF1YLL011W AIM21P40563 679 aa5.42□□□□□ -1.54
SOF1YLL011W XKS1P42826 600 aa5.42□□□□□ -1.54
SOF1YLL011W YGR237CP50089 785 aa5.42□□□□□ -1.54
SOF1YLL011W YDR344CQ05510 147 aa5.42□□□□□ -1.54
SOF1YLL011W EAF1Q06337 982 aa5.42□□□□□ -1.54
SOF1YLL011W SLX4Q12098 748 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms