RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W IRE1P32361 1115 aa7.63□□□□□ -1.19
SPC42YKL042W PSY2P40164 858 aa7.63□□□□□ -1.19
SPC42YKL042W CCT8P47079 568 aaKnown RBP7.63□□□□□ -1.19
SPC42YKL042W MTO1P53070 669 aa7.63□□□□□ -1.19
SPC42YKL042W ESF1Q06344 628 aaKnown RBP7.63□□□□□ -1.19
SPC42YKL042W YDR461C-AQ2V2P7 80 aa7.63□□□□□ -1.19
SPC42YKL042W ISW1P38144 1129 aa7.62□□□□□ -1.19
SPC42YKL042W INP54Q08227 384 aaKnown RBP7.62□□□□□ -1.19
SPC42YKL042W CYC8P14922 966 aa7.61□□□□□ -1.19
SPC42YKL042W CLN2P20438 545 aa7.61□□□□□ -1.19
SPC42YKL042W GIP1P38229 639 aa7.61□□□□□ -1.19
SPC42YKL042W BSD2P38356 321 aa7.6□□□□□ -1.19
SPC42YKL042W YHL008CP38750 627 aa7.6□□□□□ -1.19
SPC42YKL042W ALD6P54115 500 aaKnown RBP7.6□□□□□ -1.19
SPC42YKL042W VPS16Q03308 798 aa7.6□□□□□ -1.19
SPC42YKL042W YOR296WQ08748 1289 aa7.6□□□□□ -1.19
SPC42YKL042W PIN2Q12057 282 aa7.6□□□□□ -1.19
SPC42YKL042W RPC31P17890 251 aa7.59□□□□□ -1.19
SPC42YKL042W FAA3P39002 694 aa7.59□□□□□ -1.19
SPC42YKL042W VAC8P39968 578 aa7.59□□□□□ -1.19
SPC42YKL042W SBE2P42223 864 aaKnown RBP7.59□□□□□ -1.19
SPC42YKL042W TOS4Q06266 489 aa7.59□□□□□ -1.19
SPC42YKL042W PSH1Q12161 406 aa7.59□□□□□ -1.19
SPC42YKL042W HXK1P04806 485 aaKnown RBP7.58□□□□□ -1.2
SPC42YKL042W RAD2P07276 1031 aa7.58□□□□□ -1.2
SPC42YKL042W PDC6P26263 563 aaKnown RBP7.58□□□□□ -1.2
SPC42YKL042W PET112P33893 541 aa7.58□□□□□ -1.2
SPC42YKL042W DAL4Q04895 635 aa7.58□□□□□ -1.2
SPC42YKL042W YPR053CQ6Q5F3 151 aa7.58□□□□□ -1.2
SPC42YKL042W ALD3P54114 506 aa7.57□□□□□ -1.2
SPC42YKL042W YCS4Q06156 1176 aa7.57□□□□□ -1.2
SPC42YKL042W LEU1P07264 779 aaKnown RBP7.56□□□□□ -1.2
SPC42YKL042W AIM46P38885 310 aa7.56□□□□□ -1.2
SPC42YKL042W TDA6Q06466 467 aa7.56□□□□□ -1.2
SPC42YKL042W FLP1P03870 423 aa7.55□□□□□ -1.2
SPC42YKL042W NAB2P32505 525 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
SPC42YKL042W PRP40P33203 583 aaKnown RBP7.55□□□□□ -1.2
SPC42YKL042W MNR2P35724 969 aa7.55□□□□□ -1.2
SPC42YKL042W ECM2P38241 364 aaKnown RBP7.55□□□□□ -1.2
SPC42YKL042W SKN7P38889 622 aa7.55□□□□□ -1.2
SPC42YKL042W CUS1Q02554 436 aaPredicted RBP7.55□□□□□ -1.2
SPC42YKL042W MRPS18P42847 217 aa7.54□□□□□ -1.2
SPC42YKL042W FPR4Q06205 392 aaPredicted RBP7.54□□□□□ -1.2
SPC42YKL042W MCD1Q12158 566 aa7.54□□□□□ -1.2
SPC42YKL042W YOL098CQ12496 1037 aa7.54□□□□□ -1.2
SPC42YKL042W KAR2P16474 682 aaKnown RBP7.53□□□□□ -1.2
SPC42YKL042W CWC24P53769 259 aa7.53□□□□□ -1.2
SPC42YKL042W YMR187CQ03236 431 aa7.53□□□□□ -1.2
SPC42YKL042W EMG1Q06287 252 aaKnown RBP7.53□□□□□ -1.2
SPC42YKL042W RGP1P16664 663 aa7.52□□□□□ -1.21
SPC42YKL042W PRE9P23638 258 aaKnown RBP7.52□□□□□ -1.21
SPC42YKL042W SKP1P52286 194 aa7.52□□□□□ -1.21
SPC42YKL042W NRD1P53617 575 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
SPC42YKL042W FPS1P23900 669 aa7.51□□□□□ -1.21
SPC42YKL042W CTR9P89105 1077 aa7.51□□□□□ -1.21
SPC42YKL042W WRS1Q12109 432 aaKnown RBP7.51□□□□□ -1.21
SPC42YKL042W GPM1P00950 247 aaKnown RBP7.5□□□□□ -1.21
SPC42YKL042W YIL165CP40446 119 aa7.5□□□□□ -1.21
SPC42YKL042W YNR014WP53719 212 aa7.5□□□□□ -1.21
SPC42YKL042W MCM5P29496 775 aaKnown RBP7.49□□□□□ -1.21
SPC42YKL042W UGA4P32837 571 aa7.49□□□□□ -1.21
SPC42YKL042W MRPL16P38064 232 aa7.49□□□□□ -1.21
SPC42YKL042W APM2P38700 605 aa7.49□□□□□ -1.21
SPC42YKL042W ITC1P53125 1264 aa7.49□□□□□ -1.21
SPC42YKL042W MON1P53129 644 aa7.49□□□□□ -1.21
SPC42YKL042W YPL109CQ02981 657 aa7.49□□□□□ -1.21
SPC42YKL042W SSF2Q12153 453 aaPredicted RBP7.49□□□□□ -1.21
SPC42YKL042W COBP00163 385 aa7.48□□□□□ -1.21
SPC42YKL042W PYC2P32327 1180 aaKnown RBP7.48□□□□□ -1.21
SPC42YKL042W NUT1P53114 1132 aa7.48□□□□□ -1.21
SPC42YKL042W ULP1Q02724 621 aa7.48□□□□□ -1.21
SPC42YKL042W MSH6Q03834 1242 aa7.48□□□□□ -1.21
SPC42YKL042W SBP1P10080 294 aaKnown RBP7.47□□□□□ -1.21
SPC42YKL042W MCX1P38323 520 aaPredicted RBP7.47□□□□□ -1.21
SPC42YKL042W ADI1Q03677 179 aa7.47□□□□□ -1.21
SPC42YKL042W SRP40P32583 406 aaPredicted RBP7.46□□□□□ -1.22
SPC42YKL042W NCL1P38205 684 aaKnown RBP7.46□□□□□ -1.22
SPC42YKL042W YJL049WP47048 450 aa7.46□□□□□ -1.22
SPC42YKL042W YNR040WP53736 256 aa7.46□□□□□ -1.22
SPC42YKL042W RVS167P39743 482 aaKnown RBP7.45□□□□□ -1.22
SPC42YKL042W GDE1Q02979 1223 aa7.45□□□□□ -1.22
SPC42YKL042W PMT7Q06644 662 aa7.45□□□□□ -1.22
SPC42YKL042W RPP1AP05318 106 aaPredicted RBP7.44□□□□□ -1.22
SPC42YKL042W CDC34P14682 295 aa7.44□□□□□ -1.22
SPC42YKL042W YCK2P23292 546 aaKnown RBP7.44□□□□□ -1.22
SPC42YKL042W DUR3P33413 735 aa7.44□□□□□ -1.22
SPC42YKL042W BRN1P38170 754 aa7.44□□□□□ -1.22
SPC42YKL042W BOI2P39969 1040 aa7.44□□□□□ -1.22
SPC42YKL042W SQT1P35184 431 aa7.43□□□□□ -1.22
SPC42YKL042W IOC3P43596 787 aa7.43□□□□□ -1.22
SPC42YKL042W FAA4P47912 694 aaKnown RBP7.43□□□□□ -1.22
SPC42YKL042W YKL091CP33324 310 aaKnown RBP7.42□□□□□ -1.22
SPC42YKL042W PIC2P40035 300 aa7.42□□□□□ -1.22
SPC42YKL042W YER156CP40093 338 aaKnown RBP7.42□□□□□ -1.22
SPC42YKL042W RSM26P47141 266 aa7.42□□□□□ -1.22
SPC42YKL042W PPT1P53043 513 aa7.42□□□□□ -1.22
SPC42YKL042W NMD2P38798 1089 aaKnown RBP7.41□□□□□ -1.22
SPC42YKL042W SAP155P43612 1002 aa7.41□□□□□ -1.22
SPC42YKL042W NSE3Q05541 303 aa7.41□□□□□ -1.22
SPC42YKL042W RSC2Q06488 889 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms