RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C CEF1Q03654 590 aaPredicted RBP5.04□□□□□ -1.6
PRP28YDR243C YDR338CQ05497 695 aa5.04□□□□□ -1.6
PRP28YDR243C HEL2Q05580 639 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C YLR257WQ06146 321 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C UTP4Q06679 776 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C CDC3P32457 520 aaKnown RBP5.03□□□□□ -1.6
PRP28YDR243C KDX1P36005 433 aa5.03□□□□□ -1.6
PRP28YDR243C PET100P38958 111 aa5.03□□□□□ -1.6
PRP28YDR243C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
PRP28YDR243C HST3P53687 447 aa5.03□□□□□ -1.6
PRP28YDR243C IST1P53843 298 aaPredicted RBP5.03□□□□□ -1.6
PRP28YDR243C ARP5P53946 755 aa5.03□□□□□ -1.6
PRP28YDR243C SLX4Q12098 748 aa5.03□□□□□ -1.6
PRP28YDR243C MYO2P19524 1574 aaKnown RBP5.02□□□□□ -1.61
PRP28YDR243C YEF3P16521 1044 aaKnown RBP5.02□□□□□ -1.61
PRP28YDR243C SEC6P32844 805 aa5.02□□□□□ -1.61
PRP28YDR243C GDT1P38301 280 aaPredicted RBP5.02□□□□□ -1.61
PRP28YDR243C SUM1P46676 1062 aa5.02□□□□□ -1.61
PRP28YDR243C RTS3P53289 263 aa5.02□□□□□ -1.61
PRP28YDR243C VTC3Q02725 835 aa5.02□□□□□ -1.61
PRP28YDR243C TFB3Q03290 321 aa5.02□□□□□ -1.61
PRP28YDR243C PDS5Q04264 1277 aa5.02□□□□□ -1.61
PRP28YDR243C RRP9Q06506 573 aaKnown RBP5.02□□□□□ -1.61
PRP28YDR243C RIX7Q07844 837 aaKnown RBP5.02□□□□□ -1.61
PRP28YDR243C APC2Q12440 853 aa5.02□□□□□ -1.61
PRP28YDR243C RTC1Q08281 1341 aa5.02□□□□□ -1.61
PRP28YDR243C HSL1P34244 1518 aa5.01□□□□□ -1.61
PRP28YDR243C RPP0P05317 312 aaKnown RBP5.01□□□□□ -1.61
PRP28YDR243C SSA4P22202 642 aaKnown RBP5.01□□□□□ -1.61
PRP28YDR243C AIM21P40563 679 aa5.01□□□□□ -1.61
PRP28YDR243C ALD2P47771 506 aa5.01□□□□□ -1.61
PRP28YDR243C BTN2P53286 410 aa5.01□□□□□ -1.61
PRP28YDR243C MEH1Q02205 184 aa5.01□□□□□ -1.61
PRP28YDR243C YML119WQ03208 357 aa5.01□□□□□ -1.61
PRP28YDR243C STE20Q03497 939 aaKnown RBP5.01□□□□□ -1.61
PRP28YDR243C INP2Q03824 705 aa5.01□□□□□ -1.61
PRP28YDR243C PSK2Q08217 1101 aa5.01□□□□□ -1.61
PRP28YDR243C BUD21Q08492 214 aaPredicted RBP5.01□□□□□ -1.61
PRP28YDR243C MRPS28P21771 286 aa5.01□□□□□ -1.61
PRP28YDR243C ERC1P38767 581 aa5.01□□□□□ -1.61
PRP28YDR243C GYP7P48365 746 aa5.01□□□□□ -1.61
PRP28YDR243C HOS2P53096 452 aaPredicted RBP5.01□□□□□ -1.61
PRP28YDR243C GDE1Q02979 1223 aa5.01□□□□□ -1.61
PRP28YDR243C SPO19Q03029 223 aa5.01□□□□□ -1.61
PRP28YDR243C VMS1Q04311 632 aaKnown RBP5.01□□□□□ -1.61
PRP28YDR243C MLP2P40457 1679 aa5□□□□□ -1.61
PRP28YDR243C PKC1P24583 1151 aa5□□□□□ -1.61
PRP28YDR243C MIC60P36112 540 aa5□□□□□ -1.61
PRP28YDR243C PBY1P38254 753 aa5□□□□□ -1.61
PRP28YDR243C RFC1P38630 861 aaKnown RBP5□□□□□ -1.61
PRP28YDR243C SHC1P39000 512 aa5□□□□□ -1.61
PRP28YDR243C RIA1P53893 1110 aa5□□□□□ -1.61
PRP28YDR243C TIM11P81449 96 aaPredicted RBP5□□□□□ -1.61
PRP28YDR243C PAN1P32521 1480 aa5□□□□□ -1.61
PRP28YDR243C REV3P14284 1504 aa5□□□□□ -1.61
PRP28YDR243C UBP1P25037 809 aa4.99□□□□□ -1.61
PRP28YDR243C BUD14P27637 709 aa4.99□□□□□ -1.61
PRP28YDR243C RME1P32338 300 aaKnown RBP4.99□□□□□ -1.61
PRP28YDR243C RPC37P36121 282 aa4.99□□□□□ -1.61
PRP28YDR243C YLF2P38746 405 aa4.99□□□□□ -1.61
PRP28YDR243C TY4A-JP47023 414 aa4.99□□□□□ -1.61
PRP28YDR243C BRE1Q07457 700 aaKnown RBP4.99□□□□□ -1.61
PRP28YDR243C CIR2Q08822 631 aa4.99□□□□□ -1.61
PRP28YDR243C BRR1Q99177 341 aaPredicted RBP4.99□□□□□ -1.61
PRP28YDR243C NUP157P40064 1391 aaKnown RBP4.99□□□□□ -1.61
PRP28YDR243C SCC2Q04002 1493 aa4.99□□□□□ -1.61
PRP28YDR243C MAK16P10962 306 aaPredicted RBP4.99□□□□□ -1.61
PRP28YDR243C CYC8P14922 966 aa4.99□□□□□ -1.61
PRP28YDR243C FAR1P21268 830 aa4.99□□□□□ -1.61
PRP28YDR243C MSM1P22438 575 aa4.99□□□□□ -1.61
PRP28YDR243C YME2P32843 850 aa4.99□□□□□ -1.61
PRP28YDR243C EFM2P38347 419 aa4.99□□□□□ -1.61
PRP28YDR243C YIR042CP40586 236 aa4.99□□□□□ -1.61
PRP28YDR243C SPR3P41901 512 aa4.99□□□□□ -1.61
PRP28YDR243C BNI5P53890 448 aaKnown RBP4.99□□□□□ -1.61
PRP28YDR243C MRD1Q06106 887 aaKnown RBP4.99□□□□□ -1.61
PRP28YDR243C YKL068W-AQ3E826 78 aa4.99□□□□□ -1.61
PRP28YDR243C SEC23P15303 768 aaKnown RBP4.98□□□□□ -1.61
PRP28YDR243C MRC1P25588 1096 aa4.98□□□□□ -1.61
PRP28YDR243C VAC17P25591 423 aa4.98□□□□□ -1.61
PRP28YDR243C YEL1P34225 687 aa4.98□□□□□ -1.61
PRP28YDR243C ZDS1P50111 915 aaKnown RBP4.98□□□□□ -1.61
PRP28YDR243C AOS1Q06624 347 aa4.98□□□□□ -1.61
PRP28YDR243C TLG2Q08144 397 aa4.98□□□□□ -1.61
PRP28YDR243C YPL225WQ08971 146 aaKnown RBP4.98□□□□□ -1.61
PRP28YDR243C STU1P38198 1513 aa4.97□□□□□ -1.61
PRP28YDR243C CDC37P06101 506 aaKnown RBP4.97□□□□□ -1.61
PRP28YDR243C CDC31P06704 161 aaKnown RBP4.97□□□□□ -1.61
PRP28YDR243C HIR2P32480 875 aa4.97□□□□□ -1.61
PRP28YDR243C CSE4P36012 229 aa4.97□□□□□ -1.61
PRP28YDR243C ATG14P38270 344 aa4.97□□□□□ -1.61
PRP28YDR243C FIG4P42837 879 aa4.97□□□□□ -1.61
PRP28YDR243C YJR115WP47152 169 aa4.97□□□□□ -1.61
PRP28YDR243C HEH2Q03281 663 aa4.97□□□□□ -1.61
PRP28YDR243C RSC2Q06488 889 aa4.97□□□□□ -1.61
PRP28YDR243C YDL144CQ07589 356 aa4.97□□□□□ -1.61
PRP28YDR243C RPO31P04051 1460 aa4.97□□□□□ -1.61
PRP28YDR243C ARD1P07347 238 aaPredicted RBP4.96□□□□□ -1.61
PRP28YDR243C HSP104P31539 908 aaKnown RBP4.96□□□□□ -1.61
PRP28YDR243C RRP1P35178 278 aaPredicted RBP4.96□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms