RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W ECM23Q02710 187 aa6.59□□□□□ -1.35
RPT2YDL007W OPT2Q06593 877 aa6.59□□□□□ -1.35
RPT2YDL007W RPP0P05317 312 aaKnown RBP6.58□□□□□ -1.36
RPT2YDL007W PDI1P17967 522 aaKnown RBP6.58□□□□□ -1.36
RPT2YDL007W SUM1P46676 1062 aa6.58□□□□□ -1.36
RPT2YDL007W MSN5P52918 1224 aa6.58□□□□□ -1.36
RPT2YDL007W PCT1P13259 424 aa6.57□□□□□ -1.36
RPT2YDL007W DLD1P32891 587 aa6.57□□□□□ -1.36
RPT2YDL007W HAT1Q12341 374 aa6.57□□□□□ -1.36
RPT2YDL007W YRF1-2P40105 1681 aa6.56□□□□□ -1.36
RPT2YDL007W SWI5P08153 709 aa6.56□□□□□ -1.36
RPT2YDL007W RPS6AP0CX37 236 aaKnown RBP6.56□□□□□ -1.36
RPT2YDL007W RPS6BP0CX38 236 aaPredicted RBP6.56□□□□□ -1.36
RPT2YDL007W DAL1P32375 460 aa6.56□□□□□ -1.36
RPT2YDL007W SLD2P34252 453 aa6.56□□□□□ -1.36
RPT2YDL007W NTH2P35172 780 aa6.56□□□□□ -1.36
RPT2YDL007W AHP1P38013 176 aaKnown RBP6.56□□□□□ -1.36
RPT2YDL007W PAF1P38351 445 aa6.56□□□□□ -1.36
RPT2YDL007W ALA1P40825 983 aaKnown RBP6.56□□□□□ -1.36
RPT2YDL007W RPN11P43588 306 aaKnown RBP6.56□□□□□ -1.36
RPT2YDL007W AIM44Q99299 758 aa6.56□□□□□ -1.36
RPT2YDL007W QCR6P00127 147 aa6.55□□□□□ -1.36
RPT2YDL007W GAR1P28007 205 aaKnown RBP6.55□□□□□ -1.36
RPT2YDL007W YJL181WP46987 611 aa6.55□□□□□ -1.36
RPT2YDL007W ACS2P52910 683 aaKnown RBP6.55□□□□□ -1.36
RPT2YDL007W TCB1Q12466 1186 aa6.55□□□□□ -1.36
RPT2YDL007W CYT1P07143 309 aa6.54□□□□□ -1.36
RPT2YDL007W MCM1P11746 286 aa6.54□□□□□ -1.36
RPT2YDL007W VAN1P23642 535 aa6.54□□□□□ -1.36
RPT2YDL007W CWH41P53008 833 aa6.54□□□□□ -1.36
RPT2YDL007W TRS33Q99394 268 aa6.54□□□□□ -1.36
RPT2YDL007W UTP7P40055 554 aaKnown RBP6.53□□□□□ -1.36
RPT2YDL007W CTR9P89105 1077 aa6.53□□□□□ -1.36
RPT2YDL007W PUF6Q04373 656 aaKnown RBP6.53□□□□□ -1.36
RPT2YDL007W UBX7P38349 436 aa6.52□□□□□ -1.37
RPT2YDL007W KIP3P53086 805 aaKnown RBP6.52□□□□□ -1.37
RPT2YDL007W YRB30P53107 440 aaPredicted RBP6.52□□□□□ -1.37
RPT2YDL007W BUD21Q08492 214 aaPredicted RBP6.52□□□□□ -1.37
RPT2YDL007W SUI2P20459 304 aaKnown RBP6.51□□□□□ -1.37
RPT2YDL007W MSP1P28737 362 aa6.51□□□□□ -1.37
RPT2YDL007W SSF1P38789 453 aaPredicted RBP6.51□□□□□ -1.37
RPT2YDL007W YDL144CQ07589 356 aa6.51□□□□□ -1.37
RPT2YDL007W TY1A-BLQ12266 440 aa6.51□□□□□ -1.37
RPT2YDL007W NOT3P06102 836 aaKnown RBP6.5□□□□□ -1.37
RPT2YDL007W VPS24P36095 224 aaKnown RBP6.5□□□□□ -1.37
RPT2YDL007W TYS1P36421 394 aaKnown RBP6.5□□□□□ -1.37
RPT2YDL007W SSN3P39073 555 aa6.5□□□□□ -1.37
RPT2YDL007W UBP15P50101 1230 aa6.5□□□□□ -1.37
RPT2YDL007W YGR130CP53278 816 aa6.5□□□□□ -1.37
RPT2YDL007W DUS1P53759 423 aaKnown RBP6.5□□□□□ -1.37
RPT2YDL007W RPP1AP05318 106 aaPredicted RBP6.5□□□□□ -1.37
RPT2YDL007W KNS1P32350 737 aaPredicted RBP6.5□□□□□ -1.37
RPT2YDL007W OSH7P38755 437 aa6.5□□□□□ -1.37
RPT2YDL007W LYS4P49367 693 aaPredicted RBP6.5□□□□□ -1.37
RPT2YDL007W ROM1P53046 1155 aa6.5□□□□□ -1.37
RPT2YDL007W YPQ2Q06328 317 aa6.5□□□□□ -1.37
RPT2YDL007W SNF2P22082 1703 aa6.49□□□□□ -1.37
RPT2YDL007W TAF5P38129 798 aa6.49□□□□□ -1.37
RPT2YDL007W ACO2P39533 789 aa6.49□□□□□ -1.37
RPT2YDL007W YTA6P40328 754 aa6.49□□□□□ -1.37
RPT2YDL007W JJJ2P46997 583 aa6.49□□□□□ -1.37
RPT2YDL007W NGR1P32831 672 aaKnown RBP6.48□□□□□ -1.37
RPT2YDL007W SCD5P34758 872 aa6.48□□□□□ -1.37
RPT2YDL007W ARL1P38116 183 aaKnown RBP6.48□□□□□ -1.37
RPT2YDL007W NAP1P25293 417 aaKnown RBP6.47□□□□□ -1.37
RPT2YDL007W CTH1P47976 325 aa6.47□□□□□ -1.37
RPT2YDL007W SEN54Q02825 467 aaPredicted RBP6.47□□□□□ -1.37
RPT2YDL007W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPT2YDL007W NOP58Q12499 511 aaKnown RBP6.47□□□□□ -1.37
RPT2YDL007W MLP1Q02455 1875 aaKnown RBP6.46□□□□□ -1.37
RPT2YDL007W IRE1P32361 1115 aa6.46□□□□□ -1.38
RPT2YDL007W RGA1P39083 1007 aa6.46□□□□□ -1.38
RPT2YDL007W UTP4Q06679 776 aaKnown RBP6.46□□□□□ -1.38
RPT2YDL007W RAV1P47104 1357 aa6.45□□□□□ -1.38
RPT2YDL007W LSP1Q12230 341 aaKnown RBP6.45□□□□□ -1.38
RPT2YDL007W RTC1Q08281 1341 aa6.44□□□□□ -1.38
RPT2YDL007W CDC19P00549 500 aaKnown RBP6.44□□□□□ -1.38
RPT2YDL007W SRS2P12954 1174 aa6.44□□□□□ -1.38
RPT2YDL007W SLA1P32790 1244 aa6.44□□□□□ -1.38
RPT2YDL007W TPS3P38426 1054 aaKnown RBP6.44□□□□□ -1.38
RPT2YDL007W ROG3P43602 733 aa6.44□□□□□ -1.38
RPT2YDL007W YNR029CP53729 429 aaKnown RBP6.44□□□□□ -1.38
RPT2YDL007W CAF120P53836 1060 aa6.44□□□□□ -1.38
RPT2YDL007W RIA1P53893 1110 aa6.44□□□□□ -1.38
RPT2YDL007W IOC4Q04213 475 aa6.44□□□□□ -1.38
RPT2YDL007W YBL113CQ7M4S9 792 aa6.44□□□□□ -1.38
RPT2YDL007W HEM3P28789 327 aa6.43□□□□□ -1.38
RPT2YDL007W PRP40P33203 583 aaKnown RBP6.43□□□□□ -1.38
RPT2YDL007W MPP10P47083 593 aaKnown RBP6.43□□□□□ -1.38
RPT2YDL007W TY1A-MR1Q04215 440 aa6.43□□□□□ -1.38
RPT2YDL007W PUN1Q06991 263 aa6.43□□□□□ -1.38
RPT2YDL007W NUP192P47054 1683 aa6.42□□□□□ -1.38
RPT2YDL007W ERP5P38819 212 aa6.42□□□□□ -1.38
RPT2YDL007W KAR5Q04746 504 aa6.42□□□□□ -1.38
RPT2YDL007W RAD2P07276 1031 aa6.41□□□□□ -1.38
RPT2YDL007W YEF3P16521 1044 aaKnown RBP6.41□□□□□ -1.38
RPT2YDL007W RRN6P32786 894 aa6.41□□□□□ -1.38
RPT2YDL007W NPR2P39923 615 aa6.41□□□□□ -1.38
RPT2YDL007W ESL2P36168 1195 aa6.4□□□□□ -1.39
RPT2YDL007W YIR007WP40566 764 aa6.4□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms