RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	GDT1	P38301	280 aa	Predicted RBP	4.82	□□□□□ -1.64
RPG1	YBR079C	MGA2	P40578	1113 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	ALD3	P54114	506 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	AFT2	Q08957	416 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	YKL068W-A	Q3E826	78 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	DIT2	P21595	489 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	OPI1	P21957	404 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	CLB1	P24868	471 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	DEP1	P31385	405 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	SAP1	P39955	897 aa	Known RBP	4.82	□□□□□ -1.64
RPG1	YBR079C	PKH3	Q03306	898 aa	Predicted RBP	4.82	□□□□□ -1.64
RPG1	YBR079C	MTC5	Q03897	1148 aa		4.82	□□□□□ -1.64
RPG1	YBR079C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
RPG1	YBR079C	MSH3	P25336	1018 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	OSH3	P38713	996 aa	Known RBP	4.81	□□□□□ -1.64
RPG1	YBR079C	RPN10	P38886	268 aa	Known RBP	4.81	□□□□□ -1.64
RPG1	YBR079C	AKR1	P39010	764 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	APT1	P49435	187 aa	Known RBP	4.81	□□□□□ -1.64
RPG1	YBR079C	ECM23	Q02710	187 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	YOL098C	Q12496	1037 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	VPS1	P21576	704 aa	Known RBP	4.81	□□□□□ -1.64
RPG1	YBR079C	MRC1	P25588	1096 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	TFG2	P41896	400 aa	Predicted RBP	4.81	□□□□□ -1.64
RPG1	YBR079C	VPS75	P53853	264 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	HDA1	P53973	706 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	RBA50	Q04418	439 aa		4.81	□□□□□ -1.64
RPG1	YBR079C	PGI1	P12709	554 aa	Known RBP	4.8	□□□□□ -1.64
RPG1	YBR079C	MET1	P36150	593 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	SEC9	P40357	651 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	EST2	Q06163	884 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	MCM16	Q12262	181 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	COB	P00163	385 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	CDC6	P09119	513 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	SEC65	P29478	273 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	RPT3	P33298	428 aa	Known RBP	4.8	□□□□□ -1.64
RPG1	YBR079C	RER2	P35196	286 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	REI1	P38344	393 aa	Predicted RBP	4.8	□□□□□ -1.64
RPG1	YBR079C	GYL1	Q04322	720 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	YCG1	Q06680	1035 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	DCS2	Q12123	353 aa		4.8	□□□□□ -1.64
RPG1	YBR079C	CHO2	P05374	869 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	UBC1	P21734	215 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RPG1	YBR079C	RFT1	P38206	574 aa	Predicted RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	SPT8	P38915	602 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	HAL5	P38970	855 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	PTK2	P47116	818 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	YGL140C	P53120	1219 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	UBP10	P53874	792 aa	Predicted RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	HCR1	Q05775	265 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RPG1	YBR079C	URA1	P28272	314 aa	Predicted RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	STO1	P34160	861 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	CAJ1	P39101	391 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	YIR042C	P40586	236 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	CAF130	P53280	1122 aa	Predicted RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	APP1	P53933	587 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	CSC1	Q06538	782 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	ENV9	Q08651	330 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	PHM7	Q12252	991 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	GIN4	Q12263	1142 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	PET111	P08468	800 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	HO	P09932	586 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	NGR1	P32831	672 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	VPS41	P38959	992 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	RRP8	P38961	392 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	EIS1	Q05050	843 aa	Known RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	PPM2	Q08282	695 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	SSF2	Q12153	453 aa	Predicted RBP	4.79	□□□□□ -1.64
RPG1	YBR079C	TAH18	Q12181	623 aa		4.79	□□□□□ -1.64
RPG1	YBR079C	RPS6A	P0CX37	236 aa	Known RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	RPS6B	P0CX38	236 aa	Predicted RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	COQ1	P18900	473 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	ENP2	P48234	707 aa	Known RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	SPN1	Q06505	410 aa	Predicted RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	PSR2	Q07949	397 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	ATG9	Q12142	997 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	SWI4	P25302	1093 aa	Known RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	MRPL32	P25348	183 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	SWE1	P32944	819 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	SAP190	P36123	1033 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	SHM1	P37292	490 aa	Predicted RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	ADE17	P38009	592 aa	Known RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	CRG1	P38892	291 aa	RIP-Chip data	4.78	□□□□□ -1.64	not detected
RPG1	YBR079C	YMR102C	Q03177	834 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	KAR5	Q04746	504 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	GFD1	Q04839	188 aa	Known RBP	4.78	□□□□□ -1.64
RPG1	YBR079C	SML1	Q04964	104 aa		4.78	□□□□□ -1.64
RPG1	YBR079C	PHO13	P19881	312 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	YET1	P35723	206 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	GRX7	P38068	203 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	NDC80	P40460	691 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	IRC8	P47046	822 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	LSC2	P53312	427 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	GET3	Q12154	354 aa	Known RBP	4.77	□□□□□ -1.65
RPG1	YBR079C	CDC37	P06101	506 aa	Known RBP	4.77	□□□□□ -1.65
RPG1	YBR079C	SPC110	P32380	944 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	UFD2	P54860	961 aa		4.77	□□□□□ -1.65
RPG1	YBR079C	SSA2	P10592	639 aa	Known RBP	4.76	□□□□□ -1.65
RPG1	YBR079C	SLD2	P34252	453 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms