RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C RPP1AP05318 106 aaPredicted RBP8.08□□□□□ -1.12
CDS1YBR029C YIL165CP40446 119 aa8.08□□□□□ -1.12
CDS1YBR029C YLR346CQ06139 101 aa8.08□□□□□ -1.12
CDS1YBR029C RVS167P39743 482 aaKnown RBP8.07□□□□□ -1.12
CDS1YBR029C MON1P53129 644 aa8.07□□□□□ -1.12
CDS1YBR029C NCL1P38205 684 aaKnown RBP8.06□□□□□ -1.12
CDS1YBR029C NUT1P53114 1132 aa8.06□□□□□ -1.12
CDS1YBR029C ITC1P53125 1264 aa8.06□□□□□ -1.12
CDS1YBR029C TRK1P12685 1235 aa8.05□□□□□ -1.12
CDS1YBR029C SRP40P32583 406 aaPredicted RBP8.05□□□□□ -1.12
CDS1YBR029C CTR9P89105 1077 aa8.05□□□□□ -1.12
CDS1YBR029C ULP1Q02724 621 aa8.05□□□□□ -1.12
CDS1YBR029C ADI1Q03677 179 aa8.05□□□□□ -1.12
CDS1YBR029C MCM5P29496 775 aaKnown RBP8.04□□□□□ -1.12
CDS1YBR029C PYC2P32327 1180 aaKnown RBP8.04□□□□□ -1.12
CDS1YBR029C MRPL16P38064 232 aa8.04□□□□□ -1.12
CDS1YBR029C YJL049WP47048 450 aa8.04□□□□□ -1.12
CDS1YBR029C YPL109CQ02981 657 aa8.04□□□□□ -1.12
CDS1YBR029C PMT7Q06644 662 aa8.03□□□□□ -1.12
CDS1YBR029C SQT1P35184 431 aa8.02□□□□□ -1.13
CDS1YBR029C GDE1Q02979 1223 aa8.02□□□□□ -1.13
CDS1YBR029C MSH6Q03834 1242 aa8.02□□□□□ -1.13
CDS1YBR029C RSC2Q06488 889 aa8.02□□□□□ -1.13
CDS1YBR029C SSF2Q12153 453 aaPredicted RBP8.02□□□□□ -1.13
CDS1YBR029C UGA4P32837 571 aa8.01□□□□□ -1.13
CDS1YBR029C YNR040WP53736 256 aa8.01□□□□□ -1.13
CDS1YBR029C GCR2Q01722 534 aa8.01□□□□□ -1.13
CDS1YBR029C COBP00163 385 aa8□□□□□ -1.13
CDS1YBR029C RSM26P47141 266 aa8□□□□□ -1.13
CDS1YBR029C CDC34P14682 295 aa7.99□□□□□ -1.13
CDS1YBR029C BRN1P38170 754 aa7.99□□□□□ -1.13
CDS1YBR029C CDC19P00549 500 aaKnown RBP7.98□□□□□ -1.13
CDS1YBR029C YKL091CP33324 310 aaKnown RBP7.98□□□□□ -1.13
CDS1YBR029C OSH7P38755 437 aa7.98□□□□□ -1.13
CDS1YBR029C OSW7P43611 510 aa7.98□□□□□ -1.13
CDS1YBR029C OPT2Q06593 877 aa7.98□□□□□ -1.13
CDS1YBR029C DUR3P33413 735 aa7.97□□□□□ -1.13
CDS1YBR029C NMD2P38798 1089 aaKnown RBP7.97□□□□□ -1.13
CDS1YBR029C YER156CP40093 338 aaKnown RBP7.97□□□□□ -1.13
CDS1YBR029C PPT1P53043 513 aa7.97□□□□□ -1.13
CDS1YBR029C HEH2Q03281 663 aa7.97□□□□□ -1.13
CDS1YBR029C RTT10Q08924 1013 aa7.97□□□□□ -1.13
CDS1YBR029C RAD27P26793 382 aa7.97□□□□□ -1.13
CDS1YBR029C PIC2P40035 300 aa7.97□□□□□ -1.13
CDS1YBR029C SCW11P53189 542 aa7.97□□□□□ -1.13
CDS1YBR029C YAF9P53930 226 aa7.97□□□□□ -1.13
CDS1YBR029C YOR131CQ12486 218 aa7.97□□□□□ -1.13
CDS1YBR029C STI1P15705 589 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
CDS1YBR029C SHU2P38957 223 aa7.96□□□□□ -1.14
CDS1YBR029C SAP155P43612 1002 aa7.96□□□□□ -1.14
CDS1YBR029C FAA4P47912 694 aaKnown RBP7.96□□□□□ -1.14
CDS1YBR029C TMA46Q12000 345 aaKnown RBP7.96□□□□□ -1.14
CDS1YBR029C GCR1P07261 785 aa7.95□□□□□ -1.14
CDS1YBR029C PPG1P32838 368 aa7.95□□□□□ -1.14
CDS1YBR029C IOC3P43596 787 aa7.95□□□□□ -1.14
CDS1YBR029C YJL181WP46987 611 aa7.95□□□□□ -1.14
CDS1YBR029C PEX13P80667 386 aa7.95□□□□□ -1.14
CDS1YBR029C NSE3Q05541 303 aa7.95□□□□□ -1.14
CDS1YBR029C MRL1Q06815 381 aa7.95□□□□□ -1.14
CDS1YBR029C CDC53Q12018 815 aaKnown RBP7.95□□□□□ -1.14
CDS1YBR029C FUS1P11710 512 aa7.94□□□□□ -1.14
CDS1YBR029C NPR1P22211 790 aa7.94□□□□□ -1.14
CDS1YBR029C GRX1P25373 110 aaKnown RBP7.94□□□□□ -1.14
CDS1YBR029C GLY1P37303 387 aaKnown RBP7.94□□□□□ -1.14
CDS1YBR029C BRE2P43132 505 aa7.94□□□□□ -1.14
CDS1YBR029C YGR053CP53234 283 aa7.94□□□□□ -1.14
CDS1YBR029C RNH70P53331 553 aa7.94□□□□□ -1.14
CDS1YBR029C IDI1P15496 288 aa7.93□□□□□ -1.14
CDS1YBR029C PRI2P20457 528 aa7.93□□□□□ -1.14
CDS1YBR029C RIM11P38615 370 aa7.93□□□□□ -1.14
CDS1YBR029C PEX28P38848 579 aa7.93□□□□□ -1.14
CDS1YBR029C XKS1P42826 600 aa7.93□□□□□ -1.14
CDS1YBR029C TDA5Q06417 326 aaKnown RBP7.93□□□□□ -1.14
CDS1YBR029C CMR1Q12510 522 aaKnown RBP7.93□□□□□ -1.14
CDS1YBR029C YMR265CQ03508 461 aaKnown RBP7.92□□□□□ -1.14
CDS1YBR029C OPI10Q08202 246 aa7.92□□□□□ -1.14
CDS1YBR029C FAL1Q12099 399 aaKnown RBP7.92□□□□□ -1.14
CDS1YBR029C FPS1P23900 669 aa7.91□□□□□ -1.14
CDS1YBR029C INP51P40559 946 aaKnown RBP7.91□□□□□ -1.14
CDS1YBR029C KRI1P42846 591 aaKnown RBP7.91□□□□□ -1.14
CDS1YBR029C DOS2P54858 310 aa7.91□□□□□ -1.14
CDS1YBR029C TAF13P11747 167 aa7.9□□□□□ -1.14
CDS1YBR029C DIT1P21623 536 aa7.9□□□□□ -1.14
CDS1YBR029C DUT1P33317 147 aa7.9□□□□□ -1.14
CDS1YBR029C NAM8Q00539 523 aaKnown RBP7.9□□□□□ -1.14
CDS1YBR029C NOG1Q02892 647 aaKnown RBP7.9□□□□□ -1.14
CDS1YBR029C TY1A-BLQ12266 440 aa7.9□□□□□ -1.14
CDS1YBR029C GLO4Q12320 285 aa7.9□□□□□ -1.14
CDS1YBR029C PRP5P21372 849 aaPredicted RBP7.89□□□□□ -1.15
CDS1YBR029C MSH3P25336 1018 aa7.89□□□□□ -1.15
CDS1YBR029C YKL077WP36081 392 aa7.89□□□□□ -1.15
CDS1YBR029C YGL140CP53120 1219 aa7.89□□□□□ -1.15
CDS1YBR029C KRE33P53914 1056 aaKnown RBP7.89□□□□□ -1.15
CDS1YBR029C RPN4Q03465 531 aa7.89□□□□□ -1.15
CDS1YBR029C SPC42P36094 363 aa7.88□□□□□ -1.15
CDS1YBR029C NAN1Q02931 896 aaKnown RBP7.88□□□□□ -1.15
CDS1YBR029C BAS1P22035 811 aa7.87□□□□□ -1.15
CDS1YBR029C YJR124CP47159 448 aa7.87□□□□□ -1.15
CDS1YBR029C BIO5P53744 561 aaKnown RBP7.87□□□□□ -1.15
CDS1YBR029C BDF2Q07442 638 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms