RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 PzpQ61838 1495 aa13.95□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Adgrl1Q80TR1 1466 aa13.95□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Zc3h13E9Q784 1729 aaKnown RBP13.95□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Tmem94Q7TSH8 1360 aa13.95□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Gm10563F6WIE4 79 aa13.94□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 4930407I10RikD3Z5T8 1512 aa13.94□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 CatipB9EKE5 520 aa13.94□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Idi1P58044 227 aa13.94□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Prkrip1Q9CWV6 186 aaKnown RBP13.94□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Liat1Q810M6 228 aa13.93□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Armcx1Q9CX83 456 aa13.93□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 PplQ9R269 1755 aa13.93□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Znf330Q922H9 316 aa13.92□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Nwd1A6H603 1563 aa13.92□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Gm6268A2A3U9 297 aa13.92□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 MpripP97434 1024 aa13.92□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 GphnQ8BUV3 769 aaKnown RBP13.91□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Uhrf1bp1lA2RSJ4 1457 aa13.91□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Dip2bQ3UH60 1574 aa13.9□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Cabp2Q9JLK4 216 aa13.9□□□□□ -0.18
Pcdh20-202ENSMUST00000192557 Gm21190A0A0G2JGJ6 266 aa13.89□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Cavin4A2AMM0 362 aa13.89□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Cabp4Q8VHC5 271 aa13.89□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Trim28Q62318 834 aa13.89□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ap3b2Q9JME5 1082 aa13.89□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ppp1r3fQ9JIG4 799 aa13.88□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Chd2E9PZM4 1827 aaKnown RBP13.88□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 U2surpQ6NV83 1029 aaKnown RBP13.88□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Nckap5lQ6GQX2 1323 aa13.88□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Iqsec2Q5DU25 1478 aa13.88□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 1700019A02RikA0A087WPV9 146 aa13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ccdc60Q8C4J0 545 aa13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ccar1Q8CH18 1146 aaKnown RBP13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Rbm25B2RY56 838 aaKnown RBP13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ppp1r15aP17564 657 aa13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Nectin2P32507 530 aa13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Rsph6aQ8CDR2 708 aa13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Pik3c2bE9QAN8 1632 aa13.87□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Slit3Q9WVB4 1523 aa13.86□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 PtpruB1AUH1 1446 aa13.86□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Tmco5bQ80X59 307 aa13.86□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Nutm1Q8BHP2 1126 aa13.86□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Pibf1E9Q6K3 756 aa13.86□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Q4VA45 678 aa13.85□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ttc41Q692V3 1318 aa13.85□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Slc35g1Q8BY79 368 aa13.85□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Swt1Q9DBQ9 907 aa13.85□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Eif4a2P10630 407 aa13.85□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Gemin5Q8BX17 1502 aaKnown RBP13.84□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Dnajc5P60904 198 aa13.84□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Pik3r4Q8VD65 1358 aa13.84□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Klhdc4Q921I2 584 aa13.84□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Mbd3Q9Z2D8 285 aaKnown RBP13.84□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Ttll13A4Q9F6 804 aa13.83□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Usp32F8VPZ3 1604 aa13.83□□□□□ -0.19
Pcdh20-202ENSMUST00000192557 Trim58Q5NCC9 485 aa13.83□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Dennd6aQ8BH65 605 aa13.83□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Chmp5Q9D7S9 219 aa13.83□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Cps1Q8C196 1500 aa13.83□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Cluap1Q8R3P7 413 aa13.82□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 TnikP83510 1323 aa13.81□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 CastP51125 788 aa13.8□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Tmem132eQ6IEE6 982 aa13.8□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Stk31Q99MW1 1018 aa13.8□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 4930567H17RikQ3V0K5 233 aa13.8□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Cdc37l1Q9CZP7 335 aa13.8□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Fchsd2Q3USJ8 740 aa13.8□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Frmpd2A0A140LI67 1392 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Evi5lH3BKQ3 813 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Snap23O09044 210 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Pip4k2bQ80XI4 416 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Ankrd50F7BE84 1390 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Ccne1Q61457 408 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Nlgn1Q99K10 843 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Irx6Q9ER75 438 aa13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Rreb1Q3UH06 1700 aaKnown RBP13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.79□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Kdm2bQ6P1G2 1309 aa13.78□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Chd4Q6PDQ2 1915 aaKnown RBP13.78□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Duxf3A0A0N4SV92 674 aa13.78□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Egfem1Q8C088 590 aa13.78□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Usp16Q99LG0 825 aa13.78□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 G3bp1P97855 465 aaKnown RBP13.78□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 Rlbp1Q9Z275 317 aa13.77□□□□□ -0.2
Pcdh20-202ENSMUST00000192557 FancaQ9JL70 1439 aa13.77□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Astn2Q80Z10 1352 aa13.76□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Ggnbp2Q5SV77 696 aa13.76□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Ttc21aQ8C0S4 1314 aa13.76□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 NudcO35685 332 aaKnown RBP13.76□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Sirt1Q923E4 737 aa13.76□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Abcc10Q8R4P9 1501 aa13.75□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Aplp1Q03157 653 aa13.75□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Fyb1O35601 819 aa13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 TmpoQ61033 693 aaKnown RBP13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Maco1Q7TQE6 664 aaKnown RBP13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Hoxb7P09024 217 aa13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Ciz1Q8VEH2 845 aa13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Trim30dE9PWL0 497 aa13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Eya1P97767 591 aa13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 GnpatP98192 678 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms