RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 NischQ80TM9 1593 aa21.42■■□□□ 1.02
Pcdh20-202ENSMUST00000192557 Gm35339A0A140LHH9 1649 aa20.88■□□□□ 0.93
Pcdh20-202ENSMUST00000192557 Abcc9P70170 1546 aa20.69■□□□□ 0.9
Pcdh20-202ENSMUST00000192557 Abcc8B2RUS7 1588 aa20.37■□□□□ 0.85
Pcdh20-202ENSMUST00000192557 Rhox8Q6VSS7 320 aa20.03■□□□□ 0.8
Pcdh20-202ENSMUST00000192557 ScribQ80U72 1612 aa19.15■□□□□ 0.66
Pcdh20-202ENSMUST00000192557 Kdm5dQ62240 1548 aa18.79■□□□□ 0.6
Pcdh20-202ENSMUST00000192557 Rb1cc1Q9ESK9 1588 aa18.76■□□□□ 0.59
Pcdh20-202ENSMUST00000192557 Dcaf1Q80TR8 1506 aa18.74■□□□□ 0.59
Pcdh20-202ENSMUST00000192557 Rtl1Q7M732 1744 aa18.7■□□□□ 0.58
Pcdh20-202ENSMUST00000192557 Ccdc136Q3TVA9 1136 aa18.62■□□□□ 0.57
Pcdh20-202ENSMUST00000192557 NacadQ5SWP3 1504 aa18.61■□□□□ 0.57
Pcdh20-202ENSMUST00000192557 Baz1aO88379 1555 aa18.46■□□□□ 0.55
Pcdh20-202ENSMUST00000192557 Ccdc180J3QNE4 1664 aa18.44■□□□□ 0.54
Pcdh20-202ENSMUST00000192557 Zcchc6Q5BLK4 1491 aaKnown RBP18.41■□□□□ 0.54
Pcdh20-202ENSMUST00000192557 Sycp2Q9CUU3 1500 aa18.22■□□□□ 0.51
Pcdh20-202ENSMUST00000192557 Crybg2B7ZCC2 1516 aa18■□□□□ 0.47
Pcdh20-202ENSMUST00000192557 Smarca2Q6DIC0 1577 aa17.99■□□□□ 0.47
Pcdh20-202ENSMUST00000192557 Trim41Q5NCC3 630 aa17.98■□□□□ 0.47
Pcdh20-202ENSMUST00000192557 BicraF8VPZ9 1578 aa17.87■□□□□ 0.45
Pcdh20-202ENSMUST00000192557 Cecr2E9Q2Z1 1453 aa17.86■□□□□ 0.45
Pcdh20-202ENSMUST00000192557 Cngb1E1AZ71 1325 aa17.81■□□□□ 0.44
Pcdh20-202ENSMUST00000192557 HrcG5E8J6 738 aa17.77■□□□□ 0.44
Pcdh20-202ENSMUST00000192557 Ehmt2Q9Z148 1263 aaKnown RBP17.68■□□□□ 0.42
Pcdh20-202ENSMUST00000192557 Esf1Q3V1V3 845 aaKnown RBP17.68■□□□□ 0.42
Pcdh20-202ENSMUST00000192557 Brd4Q9ESU6 1400 aaKnown RBP17.66■□□□□ 0.42
Pcdh20-202ENSMUST00000192557 Synj1Q8CHC4 1574 aa17.56■□□□□ 0.4
Pcdh20-202ENSMUST00000192557 Chic1Q8CBW7 227 aa17.53■□□□□ 0.4
Pcdh20-202ENSMUST00000192557 Gab3Q8BSM5 595 aa17.52■□□□□ 0.4
Pcdh20-202ENSMUST00000192557 CftrP26361 1476 aa17.48■□□□□ 0.39
Pcdh20-202ENSMUST00000192557 Rsf1E9PWW9 1441 aaKnown RBP17.42■□□□□ 0.38
Pcdh20-202ENSMUST00000192557 Golga3P55937 1487 aa17.4■□□□□ 0.38
Pcdh20-202ENSMUST00000192557 Smarca4Q3TKT4 1613 aaKnown RBP17.38■□□□□ 0.37
Pcdh20-202ENSMUST00000192557 Cep164Q5DU05 1446 aa17.37■□□□□ 0.37
Pcdh20-202ENSMUST00000192557 Ccdc88bQ4QRL3 1481 aa17.36■□□□□ 0.37
Pcdh20-202ENSMUST00000192557 Cttnbp2B9EJA2 1648 aa17.27■□□□□ 0.36
Pcdh20-202ENSMUST00000192557 Iqgap2Q3UQ44 1575 aa17.22■□□□□ 0.35
Pcdh20-202ENSMUST00000192557 Atad2bE9Q166 1460 aaKnown RBP17.19■□□□□ 0.34
Pcdh20-202ENSMUST00000192557 Pds5bQ4VA53 1446 aaKnown RBP17.16■□□□□ 0.34
Pcdh20-202ENSMUST00000192557 Top2bQ64511 1612 aa17.07■□□□□ 0.32
Pcdh20-202ENSMUST00000192557 Cc2d2aQ8CFW7 1633 aa17.07■□□□□ 0.32
Pcdh20-202ENSMUST00000192557 Il27Q8K3I6 234 aa17.01■□□□□ 0.31
Pcdh20-202ENSMUST00000192557 Acin1Q9JIX8 1338 aaKnown RBP16.99■□□□□ 0.31
Pcdh20-202ENSMUST00000192557 Myt1lP97500 1187 aa16.96■□□□□ 0.31
Pcdh20-202ENSMUST00000192557 Frmpd1A2AKB4 1549 aa16.95■□□□□ 0.3
Pcdh20-202ENSMUST00000192557 Fmn1Q05860 1466 aa16.94■□□□□ 0.3
Pcdh20-202ENSMUST00000192557 Npm2Q80W85 207 aa16.93■□□□□ 0.3
Pcdh20-202ENSMUST00000192557 Ercc6F8VPZ5 1481 aa16.91■□□□□ 0.3
Pcdh20-202ENSMUST00000192557 Wdr62Q3U3T8 1523 aa16.88■□□□□ 0.29
Pcdh20-202ENSMUST00000192557 Rpgrip1Q9EPQ2 1331 aa16.86■□□□□ 0.29
Pcdh20-202ENSMUST00000192557 Kif15Q6P9L6 1387 aa16.85■□□□□ 0.29
Pcdh20-202ENSMUST00000192557 Top2aQ01320 1528 aaKnown RBP16.78■□□□□ 0.28
Pcdh20-202ENSMUST00000192557 Ubl4bQ9CQ84 188 aa16.74■□□□□ 0.27
Pcdh20-202ENSMUST00000192557 Rapgef2Q8CHG7 1496 aa16.74■□□□□ 0.27
Pcdh20-202ENSMUST00000192557 Zeb1Q64318 1117 aa16.68■□□□□ 0.26
Pcdh20-202ENSMUST00000192557 Cep162Q6ZQ06 1403 aa16.67■□□□□ 0.26
Pcdh20-202ENSMUST00000192557 Phldb1Q6PDH0 1371 aaKnown RBP16.64■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 UbtfP25976 765 aaKnown RBP16.64■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 TnnQ80Z71 1560 aa16.61■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 Unc13aQ4KUS2 1712 aa16.61■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 PtprkP35822 1457 aa16.61■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 Lamc3Q9R0B6 1581 aa16.6■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 Npm1Q61937 292 aaKnown RBP16.6■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 Dnajc5bQ9CQ94 199 aa16.59■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 Thoc2B1AZI6 1594 aaKnown RBP16.58■□□□□ 0.25
Pcdh20-202ENSMUST00000192557 Cux2P70298 1426 aa16.58■□□□□ 0.24
Pcdh20-202ENSMUST00000192557 Ap3b1Q9Z1T1 1105 aa16.56■□□□□ 0.24
Pcdh20-202ENSMUST00000192557 Mier1Q5UAK0 511 aa16.54■□□□□ 0.24
Pcdh20-202ENSMUST00000192557 Plekhg3Q4VAC9 1341 aa16.53■□□□□ 0.24
Pcdh20-202ENSMUST00000192557 Ccdc18Q640L5 1455 aa16.53■□□□□ 0.24
Pcdh20-202ENSMUST00000192557 Camsap1A2AHC3 1581 aa16.51■□□□□ 0.23
Pcdh20-202ENSMUST00000192557 Clip1Q922J3 1391 aa16.48■□□□□ 0.23
Pcdh20-202ENSMUST00000192557 Arhgap35Q91YM2 1499 aa16.44■□□□□ 0.22
Pcdh20-202ENSMUST00000192557 Grin2bQ01097 1482 aa16.41■□□□□ 0.22
Pcdh20-202ENSMUST00000192557 Shroom4Q1W617 1475 aa16.41■□□□□ 0.22
Pcdh20-202ENSMUST00000192557 Fam135aQ6NS59 1506 aa16.38■□□□□ 0.21
Pcdh20-202ENSMUST00000192557 NrkQ9R0G8 1455 aa16.37■□□□□ 0.21
Pcdh20-202ENSMUST00000192557 Baz1bQ9Z277 1479 aa16.36■□□□□ 0.21
Pcdh20-202ENSMUST00000192557 LrpprcQ6PB66 1392 aaKnown RBP16.36■□□□□ 0.21
Pcdh20-202ENSMUST00000192557 Eif4g1Q6NZJ6 1600 aaKnown RBP16.33■□□□□ 0.21
Pcdh20-202ENSMUST00000192557 Setd5Q5XJV7 1441 aa16.32■□□□□ 0.2
Pcdh20-202ENSMUST00000192557 Dhx29Q6PGC1 1365 aaKnown RBP16.29■□□□□ 0.2
Pcdh20-202ENSMUST00000192557 Eea1Q8BL66 1411 aa16.28■□□□□ 0.2
Pcdh20-202ENSMUST00000192557 Duox2A2AQ99 1517 aa16.27■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 PogzQ8BZH4 1409 aaKnown RBP16.26■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 Lmod2Q3UHZ5 550 aa16.24■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 Mroh2bQ7M6Y6 1581 aa16.24■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 Arap1Q4LDD4 1452 aa16.24■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 NefmP08553 848 aa16.21■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 Efcab5A0JP43 1406 aa16.21■□□□□ 0.19
Pcdh20-202ENSMUST00000192557 Rad54l2Q99NG0 1466 aa16.19■□□□□ 0.18
Pcdh20-202ENSMUST00000192557 Mrc2Q64449 1479 aa16.18■□□□□ 0.18
Pcdh20-202ENSMUST00000192557 Map3k1P53349 1493 aa16.18■□□□□ 0.18
Pcdh20-202ENSMUST00000192557 Pcgf6Q99NA9 353 aa16.16■□□□□ 0.18
Pcdh20-202ENSMUST00000192557 Supt5hO55201 1082 aaKnown RBP16.15■□□□□ 0.18
Pcdh20-202ENSMUST00000192557 Samd9lQ69Z37 1561 aa16.13■□□□□ 0.17
Pcdh20-202ENSMUST00000192557 BlmO88700 1416 aa16.12■□□□□ 0.17
Pcdh20-202ENSMUST00000192557 Carmil1Q6EDY6 1374 aa16.12■□□□□ 0.17
Pcdh20-202ENSMUST00000192557 Kif21aQ9QXL2 1672 aa16.1■□□□□ 0.17
Pcdh20-202ENSMUST00000192557 AqrQ8CFQ3 1481 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms