RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Wwc2Q6NXJ0 1187 aa30.5■■■□□ 2.47
Scn1b-201ENSMUST00000098548 Fyb1O35601 819 aa30.49■■■□□ 2.47
Scn1b-201ENSMUST00000098548 Ecm2Q5FW85 670 aa30.49■■■□□ 2.47
Scn1b-201ENSMUST00000098548 Frmpd2A0A140LI67 1392 aa30.48■■■□□ 2.47
Scn1b-201ENSMUST00000098548 Kif7B7ZNG0 1348 aa30.43■■■□□ 2.46
Scn1b-201ENSMUST00000098548 Chd4Q6PDQ2 1915 aaKnown RBP30.43■■■□□ 2.46
Scn1b-201ENSMUST00000098548 Fbxo41Q6NS60 873 aa30.42■■■□□ 2.46
Scn1b-201ENSMUST00000098548 Gprasp1Q5U4C1 1347 aa30.41■■■□□ 2.46
Scn1b-201ENSMUST00000098548 Qtrt2B8ZXI1 415 aa30.39■■■□□ 2.46
Scn1b-201ENSMUST00000098548 TimelessQ9R1X4 1197 aa30.39■■■□□ 2.46
Scn1b-201ENSMUST00000098548 Col16a1Q8BLX7 1580 aa30.39■■■□□ 2.46
Scn1b-201ENSMUST00000098548 Slc4a2P13808 1237 aaKnown RBP30.38■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Znf710Q3U288 666 aa30.37■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Zfp142G5E869 1843 aa30.36■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Astn2Q80Z10 1352 aa30.36■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Dixdc1Q80Y83 711 aa30.35■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Dennd6aQ8BH65 605 aa30.34■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Znf526Q8BI66 675 aa30.34■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Ybx3Q9JKB3 361 aaKnown RBP30.32■■■□□ 2.45
Scn1b-201ENSMUST00000098548 Gm21190A0A0G2JGJ6 266 aa30.31■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Smim5Q8BT42 78 aa30.31■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Nlgn1Q99K10 843 aa30.31■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Atp7bQ64446 1462 aa30.31■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Abca15E9PWH4 1668 aa30.3■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Nckap5lQ6GQX2 1323 aa30.3■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Dzip1Q8BMD2 852 aa30.28■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Marf1Q8BJ34 1730 aaKnown RBP30.28■■■□□ 2.44
Scn1b-201ENSMUST00000098548 IbtkQ6ZPR6 1352 aaKnown RBP30.28■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Ubr1O70481 1757 aa30.28■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Bcl2l12Q9D3J3 255 aa30.28■■■□□ 2.44
Scn1b-201ENSMUST00000098548 PaskQ8CEE6 1383 aa30.27■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Slc5a4bQ91ZP4 660 aa30.27■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Cdk12Q14AX6 1484 aaKnown RBP30.26■■■□□ 2.44
Scn1b-201ENSMUST00000098548 Gimap6Q8K349 305 aa30.26■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Atp10bB1AWN4 1474 aa30.26■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Birc3O08863 600 aa30.25■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Ncoa4Q5U4H9 625 aa30.25■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Cadps2Q8BYR5 1297 aa30.25■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Acsbg1Q99PU5 721 aa30.25■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Zscan21Q07231 555 aa30.24■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Ncapd2Q8K2Z4 1392 aa30.24■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Tet3Q8BG87 1668 aa30.23■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Tex14Q7M6U3 1450 aa30.23■■■□□ 2.43
Scn1b-201ENSMUST00000098548 CemipQ8BI06 1361 aa30.23■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Cabp4Q8VHC5 271 aa30.22■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Mdc1Q5PSV9 1707 aa30.22■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Rab3gap2Q8BMG7 1366 aa30.21■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Map2P20357 1828 aa30.21■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Ppp2r1aQ76MZ3 589 aa30.2■■■□□ 2.43
Scn1b-201ENSMUST00000098548 Scn7aB1AYL1 1681 aa30.19■■■□□ 2.42
Scn1b-201ENSMUST00000098548 FancaQ9JL70 1439 aa30.17■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Fam135bQ9DAI6 1403 aa30.17■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Siglec1Q62230 1695 aa30.16■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Cald1E9QA15 768 aaKnown RBP30.16■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Rpgrip1lQ8CG73 1264 aa30.16■■■□□ 2.42
Scn1b-201ENSMUST00000098548 PtprvP70289 1705 aa30.15■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Nyap1Q6PFX7 833 aa30.14■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Nfat5Q9WV30 1534 aa30.14■■■□□ 2.42
Scn1b-201ENSMUST00000098548 Zmym3Q9JLM4 1370 aa30.12■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Atf7ipQ7TT18 1306 aa30.12■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Txnrd1Q9JMH6 613 aa30.12■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Bcl9lQ67FY2 1494 aa30.12■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Nid2O88322 1403 aa30.12■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Hoxb7P09024 217 aa30.11■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Gm21698A0A087WQP8 267 aa30.1■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Gm21671G3UY31 267 aa30.1■■■□□ 2.41
Scn1b-201ENSMUST00000098548 P2rx7Q9Z1M0 595 aa30.1■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Ddx54Q8K4L0 874 aaKnown RBP30.09■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Dnajc10Q9DC23 793 aa30.09■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Ano8Q6PB70 1060 aa30.08■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Kcnh5Q920E3 988 aa30.08■■■□□ 2.41
Scn1b-201ENSMUST00000098548 Arhgef1Q61210 920 aaKnown RBP30.07■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Ggt6Q6PDE7 497 aa30.07■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Robo1O89026 1612 aa30.07■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Cdhr2E9Q7P9 1308 aa30.07■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Q7TT23 1179 aa30.07■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Sema6bO54951 886 aa30.06■■■□□ 2.4
Scn1b-201ENSMUST00000098548 TatQ8QZR1 454 aa30.06■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Tmem132eQ6IEE6 982 aa30.05■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Mak16Q8BGS0 296 aaKnown RBP30.05■■■□□ 2.4
Scn1b-201ENSMUST00000098548 TnrQ8BYI9 1358 aa30.04■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Nlrp6Q91WS2 869 aa30.03■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Trim28Q62318 834 aa30.02■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Nhsl1Q8CAF4 1587 aa30.01■■■□□ 2.4
Scn1b-201ENSMUST00000098548 Fmnl2A2APV2 1086 aa30.01■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Ofd1Q80Z25 1017 aa30.01■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Lrrc59Q922Q8 307 aaKnown RBP30.01■■■□□ 2.39
Scn1b-201ENSMUST00000098548 ZgpatQ8VDM1 511 aa30■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Slit2Q9R1B9 1521 aa30■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Cntnap1O54991 1385 aa30■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Hoxc9P09633 260 aa29.98■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Scaf1Q5U4C3 1256 aaKnown RBP29.98■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Uhrf1bp1lA2RSJ4 1457 aa29.96■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Card10P58660 1021 aa29.96■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Cypt2Q6P924 180 aa29.96■■■□□ 2.39
Scn1b-201ENSMUST00000098548 Lrp6O88572 1613 aa29.94■■■□□ 2.38
Scn1b-201ENSMUST00000098548 HdgfP51859 237 aaKnown RBP29.94■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Amotl2Q8K371 772 aa29.94■■■□□ 2.38
Scn1b-201ENSMUST00000098548 MypopQ8R4U1 393 aa29.94■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Ppp1r15aP17564 657 aa29.93■■■□□ 2.38
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms