RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 DaxxO35613 739 aa19.25■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Mre11Q61216 706 aa19.25■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Ppp1r3fQ9JIG4 799 aa19.24■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Afap1Q80YS6 731 aa19.24■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Arhgef28P97433 1693 aa19.22■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Cavin4A2AMM0 362 aa19.22■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Ccdc9Q8VC31 543 aaKnown RBP19.22■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 CltcQ68FD5 1675 aaKnown RBP19.21■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Synj2Q9D2G5 1434 aa19.21■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 Tmc1Q8R4P5 757 aa19.21■□□□□ 0.67
Nkx3-1-201ENSMUST00000022646 KarsQ99MN1 595 aaKnown RBP19.2■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Abca14E9Q8F8 1683 aa19.2■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ppp2r3aB2RXC8 1150 aa19.2■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 CastP51125 788 aa19.2■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Rangap1P46061 589 aaKnown RBP19.19■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Kif13aQ9EQW7 1749 aa19.19■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ciz1Q8VEH2 845 aa19.19■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Naip7Q9JIB3 1402 aa19.19■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ecm2Q5FW85 670 aa19.18■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Cluap1Q8R3P7 413 aa19.18■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Slc12a5Q91V14 1138 aa19.18■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ppp1r18Q8BQ30 594 aa19.18■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 FanciQ8K368 1330 aa19.17■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ankrd50F7BE84 1390 aa19.17■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 NktrP30415 1453 aa19.17■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Rbm25B2RY56 838 aaKnown RBP19.17■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ccdc60Q8C4J0 545 aa19.17■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ttc21aQ8C0S4 1314 aa19.17■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Ppp1r9bQ6R891 817 aaKnown RBP19.16■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 PalmQ9Z0P4 383 aa19.16■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 ArxO35085 564 aa19.16■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Znf330Q922H9 316 aa19.16■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 4933416C03RikQ3V063 378 aa19.15■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Uhrf1bp1B2KF50 1429 aa19.15■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Plekhg1F6S200 1446 aa19.15■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Atl3Q91YH5 541 aa19.15■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Itsn1Q9Z0R4 1714 aa19.14■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 PaskQ8CEE6 1383 aa19.14■□□□□ 0.66
Nkx3-1-201ENSMUST00000022646 Pnmal2G3X9N3 661 aa19.14■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Rsph4aQ8BYM7 716 aa19.13■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Asxl2Q8BZ32 1370 aa19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Map3k19E9Q3S4 1311 aa19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Q4VA45 678 aa19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Maco1Q7TQE6 664 aaKnown RBP19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Swt1Q9DBQ9 907 aa19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Birc3O08863 600 aa19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Trim28Q62318 834 aa19.12■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Znf541Q0GGX2 1363 aa19.11■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Fchsd2Q3USJ8 740 aa19.11■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 AU019823E9PUQ3 292 aa19.1■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 G3bp1P97855 465 aaKnown RBP19.1■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Ccdc171E9Q1U1 1324 aa19.1■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Znf316Q6PGE4 1016 aa19.09■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Usp32F8VPZ3 1604 aa19.09■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Gm6268A2A3U9 297 aa19.09■□□□□ 0.65
Nkx3-1-201ENSMUST00000022646 Pik3r4Q8VD65 1358 aa19.08■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Nutm1Q8BHP2 1126 aa19.07■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Ercc6l2Q9JIM3 1537 aa19.07■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 PplQ9R269 1755 aa19.06■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Nwd1A6H603 1563 aa19.06■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Phlpp2Q8BXA7 1320 aa19.06■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Nectin2P32507 530 aa19.05■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Tbc1d32Q3URV1 1296 aa19.05■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Tmco5bQ80X59 307 aa19.05■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Atp7bQ64446 1462 aa19.05■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Sptbn5F6UCX4 1208 aa19.05■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Ppp1r15aP17564 657 aa19.05■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Hs1bp3Q3TC93 395 aa19.04■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 NpatQ8BMA5 1420 aa19.04■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Cdc37l1Q9CZP7 335 aa19.04■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Tnpo1Q8BFY9 898 aaKnown RBP19.03■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Senp3Q9EP97 568 aaKnown RBP19.03■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Rabep1O35551 862 aa19.03■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Zc3h13E9Q784 1729 aaKnown RBP19.03■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Psme1P97371 249 aa19.02■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Uhrf1bp1lA2RSJ4 1457 aa19.02■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Plekhm2Q80TQ5 1018 aa19.02■□□□□ 0.64
Nkx3-1-201ENSMUST00000022646 Mfap1aC0HKD8 439 aaKnown RBP19.01■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Mfap1bC0HKD9 439 aaKnown RBP19.01■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Map7O88735 730 aa19.01■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Txndc2Q6P902 515 aa19.01■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Nsd3Q6P2L6 1439 aa19■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 PrkcshO08795 521 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Vamp4O70480 141 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Dip2aQ8BWT5 1523 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Q3UPC7 1272 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 SkilQ60665 675 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Kif18aQ91WD7 886 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Mcm10Q0VBD2 885 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Idi2Q8BFZ6 227 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Aldh1l1Q8R0Y6 902 aa18.99■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Irx3P81067 507 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Gnai1B2RSH2 354 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Pdlim2Q8R1G6 349 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Gnai3Q9DC51 354 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Cabp2Q9JLK4 216 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 RictorQ6QI06 1708 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Htatsf1Q8BGC0 757 aa18.97■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Rsph6aQ8CDR2 708 aa18.96■□□□□ 0.63
Nkx3-1-201ENSMUST00000022646 Plin1Q8CGN5 517 aa18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms