RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 RAD59Q12223 238 aa1.91□□□□□ -2.1
snR53snR53 TY4B-PA0A0B7P3V8 1104 aa1.9□□□□□ -2.11
snR53snR53 SLX8P40072 274 aa1.9□□□□□ -2.11
snR53snR53 CKB1P43639 278 aa1.9□□□□□ -2.11
snR53snR53 TY4A-HQ6Q5P6 413 aa1.9□□□□□ -2.11
snR53snR53 YTA6P40328 754 aa1.89□□□□□ -2.11
snR53snR53 TED1P40533 473 aa1.89□□□□□ -2.11
snR53snR53 TUB2P02557 457 aaKnown RBP1.88□□□□□ -2.11
snR53snR53 PRP6P19735 899 aaPredicted RBP1.88□□□□□ -2.11
snR53snR53 NCL1P38205 684 aaKnown RBP1.88□□□□□ -2.11
snR53snR53 SLP1Q12232 587 aa1.88□□□□□ -2.11
snR53snR53 MRP10O75012 95 aa1.87□□□□□ -2.11
snR53snR53 HAL5P38970 855 aaKnown RBP1.87□□□□□ -2.11
snR53snR53 YNL165WP53891 406 aa1.87□□□□□ -2.11
snR53snR53 DSF2P38213 736 aa1.86□□□□□ -2.11
snR53snR53 DSE4P53753 1117 aa1.86□□□□□ -2.11
snR53snR53 HSP78P33416 811 aa1.85□□□□□ -2.11
snR53snR53 KTR1P27810 393 aaKnown RBP1.84□□□□□ -2.11
snR53snR53 GIP2P40036 548 aa1.84□□□□□ -2.11
snR53snR53 HPC2Q01448 625 aa1.84□□□□□ -2.11
snR53snR53 YPQ2Q06328 317 aa1.84□□□□□ -2.11
snR53snR53 YLR358CO13565 187 aa1.82□□□□□ -2.12
snR53snR53 MLF3P32047 452 aa1.82□□□□□ -2.12
snR53snR53 AIM3P38266 947 aaKnown RBP1.82□□□□□ -2.12
snR53snR53 MTO1P53070 669 aa1.82□□□□□ -2.12
snR53snR53 HDA3Q06623 655 aa1.82□□□□□ -2.12
snR53snR53 EMP47P43555 445 aa1.81□□□□□ -2.12
snR53snR53 SOK2P53438 785 aaPredicted RBP1.81□□□□□ -2.12
snR53snR53 YNR040WP53736 256 aa1.81□□□□□ -2.12
snR53snR53 MAK16P10962 306 aaPredicted RBP1.8□□□□□ -2.12
snR53snR53 ISF1P32488 338 aa1.8□□□□□ -2.12
snR53snR53 APL6P46682 809 aa1.8□□□□□ -2.12
snR53snR53 ATF2P53296 535 aa1.8□□□□□ -2.12
snR53snR53 SHM2P37291 469 aaKnown RBP1.79□□□□□ -2.12
snR53snR53 CUS1Q02554 436 aaPredicted RBP1.79□□□□□ -2.12
snR53snR53 TFB3Q03290 321 aa1.79□□□□□ -2.12
snR53snR53 NSI1Q12457 570 aa1.79□□□□□ -2.12
snR53snR53 Q0182Q9ZZW1 134 aa1.79□□□□□ -2.12
snR53snR53 APM2P38700 605 aa1.78□□□□□ -2.12
snR53snR53 MRX12P47084 519 aa1.78□□□□□ -2.12
snR53snR53 SKP1P52286 194 aa1.78□□□□□ -2.12
snR53snR53 SWI5P08153 709 aa1.77□□□□□ -2.13
snR53snR53 RDS2P19541 446 aaKnown RBP1.77□□□□□ -2.13
snR53snR53 TOD6P34219 525 aa1.77□□□□□ -2.13
snR53snR53 IDI1P15496 288 aa1.76□□□□□ -2.13
snR53snR53 RIM8P53179 542 aa1.76□□□□□ -2.13
snR53snR53 NCE103P53615 221 aa1.76□□□□□ -2.13
snR53snR53 GIC2Q06648 383 aa1.76□□□□□ -2.13
snR53snR53 CTS1P29029 562 aa1.74□□□□□ -2.13
snR53snR53 SOH1P38633 127 aa1.74□□□□□ -2.13
snR53snR53 WHI3P34761 661 aaKnown RBP1.73□□□□□ -2.13
snR53snR53 MMM1P41800 426 aa1.73□□□□□ -2.13
snR53snR53 CLU1Q03690 1277 aaKnown RBP1.73□□□□□ -2.13
snR53snR53 CBC2Q08920 208 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
snR53snR53 MCM1P11746 286 aa1.72□□□□□ -2.13
snR53snR53 CSN12P47130 423 aa1.72□□□□□ -2.13
snR53snR53 MRPL22P53881 309 aa1.72□□□□□ -2.13
snR53snR53 BDF2Q07442 638 aa1.72□□□□□ -2.13
snR53snR53 MAE1P36013 669 aaKnown RBP1.71□□□□□ -2.14
snR53snR53 PAN5P38787 379 aa1.71□□□□□ -2.14
snR53snR53 CIT3P43635 486 aa1.71□□□□□ -2.14
snR53snR53 SLI1P53304 468 aa1.71□□□□□ -2.14
snR53snR53 PUS9Q12069 462 aa1.71□□□□□ -2.14
snR53snR53 RCM1P53972 490 aa1.7□□□□□ -2.14
snR53snR53 RPS6AP0CX37 236 aaKnown RBP1.69□□□□□ -2.14
snR53snR53 RPS6BP0CX38 236 aaPredicted RBP1.69□□□□□ -2.14
snR53snR53 ADP1P25371 1049 aa1.69□□□□□ -2.14
snR53snR53 KAP122P32767 1081 aa1.69□□□□□ -2.14
snR53snR53 YJL181WP46987 611 aa1.69□□□□□ -2.14
snR53snR53 SOD2P00447 233 aa1.68□□□□□ -2.14
snR53snR53 YER156CP40093 338 aaKnown RBP1.68□□□□□ -2.14
snR53snR53 MSE1P48525 536 aa1.68□□□□□ -2.14
snR53snR53 UTP13Q05946 817 aaKnown RBP1.68□□□□□ -2.14
snR53snR53 YPL277CQ08989 487 aa1.68□□□□□ -2.14
snR53snR53 RAD53P22216 821 aa1.67□□□□□ -2.14
snR53snR53 SPB4P25808 606 aaPredicted RBP1.67□□□□□ -2.14
snR53snR53 AIM9P40053 627 aaKnown RBP1.67□□□□□ -2.14
snR53snR53 ORC3P54790 616 aa1.67□□□□□ -2.14
snR53snR53 RPS13P05756 151 aaKnown RBP1.66□□□□□ -2.14
snR53snR53 TRM2P33753 639 aa1.66□□□□□ -2.14
snR53snR53 KIP3P53086 805 aaKnown RBP1.66□□□□□ -2.14
snR53snR53 ITC1P53125 1264 aa1.66□□□□□ -2.14
snR53snR53 SSY1Q03770 852 aa1.66□□□□□ -2.14
snR53snR53 RPC31P17890 251 aa1.65□□□□□ -2.15
snR53snR53 POL5P39985 1022 aaKnown RBP1.65□□□□□ -2.15
snR53snR53 ATG3P40344 310 aa1.65□□□□□ -2.15
snR53snR53 OYE3P41816 400 aaPredicted RBP1.65□□□□□ -2.15
snR53snR53 YDL177CQ12257 170 aa1.65□□□□□ -2.15
snR53snR53 ERS1P17261 260 aa1.64□□□□□ -2.15
snR53snR53 MPT5P39016 859 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
snR53snR53 LGE1Q02796 332 aaKnown RBP1.64□□□□□ -2.15
snR53snR53 YOR059CQ08448 450 aaKnown RBP1.64□□□□□ -2.15
snR53snR53 ELG1Q12050 791 aa1.64□□□□□ -2.15
snR53snR53 NTH2P35172 780 aa1.63□□□□□ -2.15
snR53snR53 SUN4P53616 420 aa1.63□□□□□ -2.15
snR53snR53 LPX1Q12405 387 aaKnown RBP1.63□□□□□ -2.15
snR53snR53 ETP1P38748 585 aaKnown RBP1.62□□□□□ -2.15
snR53snR53 ATF1P40353 525 aa1.62□□□□□ -2.15
snR53snR53 CTF4Q01454 927 aa1.62□□□□□ -2.15
snR53snR53 RSC2Q06488 889 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms