RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W BOI1P38041 980 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W UBP12P39538 1254 aa2.52□□□□□ -2.01
SEC16YPL085W SRC1Q03707 834 aa2.52□□□□□ -2.01
SEC16YPL085W CHC1P22137 1653 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W SWI6P09959 803 aa2.52□□□□□ -2.01
SEC16YPL085W BIK1P11709 440 aa2.52□□□□□ -2.01
SEC16YPL085W SAP190P36123 1033 aa2.52□□□□□ -2.01
SEC16YPL085W VAB2P40003 282 aa2.52□□□□□ -2.01
SEC16YPL085W RLP24Q07915 199 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W TIP41Q12199 356 aa2.52□□□□□ -2.01
SEC16YPL085W CIT2P08679 460 aa2.52□□□□□ -2.01
SEC16YPL085W TRL1P09880 827 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W GAL2P13181 574 aa2.52□□□□□ -2.01
SEC16YPL085W STU2P46675 888 aa2.52□□□□□ -2.01
SEC16YPL085W TCB2P48231 1178 aa2.52□□□□□ -2.01
SEC16YPL085W ARP5P53946 755 aa2.52□□□□□ -2.01
SEC16YPL085W APL5Q08951 932 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W RIO1Q12196 484 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W NBL1Q3E7Y6 73 aa2.52□□□□□ -2.01
SEC16YPL085W LAM4P38800 1345 aa2.51□□□□□ -2.01
SEC16YPL085W CTT1P06115 562 aa2.51□□□□□ -2.01
SEC16YPL085W SAK1P38990 1142 aa2.51□□□□□ -2.01
SEC16YPL085W DPH6Q12429 685 aa2.51□□□□□ -2.01
SEC16YPL085W EFG1Q3E705 233 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-HO13535 1793 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-DR5P0C2I2 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-DR6P0C2I3 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-LR2P0C2I5 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-LR3P0C2I6 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-PR1P0C2I9 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-PR2P0C2J0 1756 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-PR3P0C2J1 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-JR1P47098 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-ML2Q03434 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-ER1Q03612 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-ML1Q04711 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-GR2Q12269 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-OLQ12273 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-PLQ12414 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W YEL043WP32618 956 aa2.51□□□□□ -2.01
SEC16YPL085W BDH2P39713 417 aa2.51□□□□□ -2.01
SEC16YPL085W LSB1P53281 241 aa2.51□□□□□ -2.01
SEC16YPL085W CAB1Q04430 367 aa2.51□□□□□ -2.01
SEC16YPL085W CFT2Q12102 859 aaPredicted RBP2.51□□□□□ -2.01
SEC16YPL085W RUD3Q12234 484 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W SSA4P22202 642 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W SMY1P32364 656 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W APL2P36000 726 aaPredicted RBP2.51□□□□□ -2.01
SEC16YPL085W BSD2P38356 321 aa2.51□□□□□ -2.01
SEC16YPL085W YIL092WP40497 633 aa2.51□□□□□ -2.01
SEC16YPL085W YNL247WP53852 767 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W APP1P53933 587 aa2.51□□□□□ -2.01
SEC16YPL085W CTR9P89105 1077 aa2.51□□□□□ -2.01
SEC16YPL085W TOM70P07213 617 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W SPE3Q12074 293 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TYS1P36421 394 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W NOP13P53883 403 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SEC16YPL085W ISW2Q08773 1120 aa2.51□□□□□ -2.01
SEC16YPL085W PWP2P25635 923 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W NIP100P33420 868 aa2.5□□□□□ -2.01
SEC16YPL085W RXT2P38255 430 aa2.5□□□□□ -2.01
SEC16YPL085W VPS64Q03944 604 aa2.5□□□□□ -2.01
SEC16YPL085W YCG1Q06680 1035 aa2.5□□□□□ -2.01
SEC16YPL085W HFI1Q12060 488 aa2.5□□□□□ -2.01
SEC16YPL085W PUP2P32379 260 aa2.5□□□□□ -2.01
SEC16YPL085W RRT6P53117 311 aaPredicted RBP2.5□□□□□ -2.01
SEC16YPL085W DPS1P04802 557 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W SEC21P32074 935 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W YAP1801P38856 637 aa2.5□□□□□ -2.01
SEC16YPL085W RRP8P38961 392 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W SHC1P39000 512 aa2.5□□□□□ -2.01
SEC16YPL085W YKE2P52553 114 aa2.5□□□□□ -2.01
SEC16YPL085W YDL121CQ07541 149 aa2.5□□□□□ -2.01
SEC16YPL085W TAH18Q12181 623 aa2.5□□□□□ -2.01
SEC16YPL085W TY1B-BRQ12193 1756 aa2.5□□□□□ -2.01
SEC16YPL085W TY1B-GR3Q12316 1755 aa2.5□□□□□ -2.01
SEC16YPL085W TY1B-ORQ92393 1755 aa2.5□□□□□ -2.01
SEC16YPL085W PBY1P38254 753 aa2.5□□□□□ -2.01
SEC16YPL085W BTN2P53286 410 aa2.5□□□□□ -2.01
SEC16YPL085W DOS2P54858 310 aa2.5□□□□□ -2.01
SEC16YPL085W BDF2Q07442 638 aa2.5□□□□□ -2.01
SEC16YPL085W YVC1Q12324 675 aa2.5□□□□□ -2.01
SEC16YPL085W ERT1P38140 529 aa2.5□□□□□ -2.01
SEC16YPL085W BRN1P38170 754 aa2.5□□□□□ -2.01
SEC16YPL085W VPS53P47061 822 aa2.5□□□□□ -2.01
SEC16YPL085W YJR098CP47139 656 aa2.5□□□□□ -2.01
SEC16YPL085W OPY2Q06810 360 aa2.5□□□□□ -2.01
SEC16YPL085W NOP58Q12499 511 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W RRP14P36080 434 aaKnown RBP2.49□□□□□ -2.01
SEC16YPL085W HMT1P38074 348 aa2.49□□□□□ -2.01
SEC16YPL085W EFM2P38347 419 aa2.49□□□□□ -2.01
SEC16YPL085W SSA2P10592 639 aaKnown RBP2.49□□□□□ -2.01
SEC16YPL085W BCD1P38772 366 aa2.49□□□□□ -2.01
SEC16YPL085W NDC80P40460 691 aa2.49□□□□□ -2.01
SEC16YPL085W FET4P40988 552 aa2.49□□□□□ -2.01
SEC16YPL085W YFL040WP43562 540 aa2.49□□□□□ -2.01
SEC16YPL085W TUS1Q06412 1307 aa2.49□□□□□ -2.01
SEC16YPL085W FOB1O13329 566 aa2.49□□□□□ -2.01
SEC16YPL085W SNA3P14359 133 aa2.49□□□□□ -2.01
SEC16YPL085W CTM1P38818 585 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 97.7 ms