RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C RAT1Q02792 1006 aaKnown RBP11.14□□□□□ -0.63
SSN3YPL042C NKP2Q06162 153 aa11.14□□□□□ -0.63
SSN3YPL042C HAT1Q12341 374 aa11.14□□□□□ -0.63
SSN3YPL042C SAC3P46674 1301 aa11.13□□□□□ -0.63
SSN3YPL042C MCM1P11746 286 aa11.13□□□□□ -0.63
SSN3YPL042C RFC1P38630 861 aaKnown RBP11.13□□□□□ -0.63
SSN3YPL042C HXT10P43581 546 aa11.13□□□□□ -0.63
SSN3YPL042C YSH1Q06224 779 aaPredicted RBP11.13□□□□□ -0.63
SSN3YPL042C CFT2Q12102 859 aaPredicted RBP11.13□□□□□ -0.63
SSN3YPL042C SUP35P05453 685 aaKnown RBP11.12□□□□□ -0.63
SSN3YPL042C CDC16P09798 840 aa11.12□□□□□ -0.63
SSN3YPL042C YDL121CQ07541 149 aa11.12□□□□□ -0.63
SSN3YPL042C MAM3Q12296 706 aa11.12□□□□□ -0.63
SSN3YPL042C SSA4P22202 642 aaKnown RBP11.11□□□□□ -0.63
SSN3YPL042C UGA2P38067 497 aa11.11□□□□□ -0.63
SSN3YPL042C YDR341CQ05506 607 aaKnown RBP11.11□□□□□ -0.63
SSN3YPL042C CTI6Q08923 506 aa11.11□□□□□ -0.63
SSN3YPL042C RRN6P32786 894 aa11.11□□□□□ -0.63
SSN3YPL042C FPR4Q06205 392 aaPredicted RBP11.11□□□□□ -0.63
SSN3YPL042C RIX7Q07844 837 aaKnown RBP11.11□□□□□ -0.63
SSN3YPL042C NCB2Q92317 146 aa11.11□□□□□ -0.63
SSN3YPL042C BDP1P46678 594 aa11.1□□□□□ -0.63
SSN3YPL042C RAD50P12753 1312 aa11.1□□□□□ -0.63
SSN3YPL042C HPC2Q01448 625 aa11.09□□□□□ -0.63
SSN3YPL042C DIB1Q06819 143 aaPredicted RBP11.09□□□□□ -0.63
SSN3YPL042C KIN1P13185 1064 aa11.08□□□□□ -0.64
SSN3YPL042C DJP1P40564 432 aa11.08□□□□□ -0.64
SSN3YPL042C SYH1Q02875 849 aaKnown RBP11.08□□□□□ -0.64
SSN3YPL042C GDE1Q02979 1223 aa11.08□□□□□ -0.64
SSN3YPL042C NMD3P38861 518 aaKnown RBP11.08□□□□□ -0.64
SSN3YPL042C VMA4P22203 233 aaKnown RBP11.07□□□□□ -0.64
SSN3YPL042C NOC2P39744 710 aaKnown RBP11.07□□□□□ -0.64
SSN3YPL042C SEC9P40357 651 aa11.07□□□□□ -0.64
SSN3YPL042C SNU66Q12420 587 aaPredicted RBP11.07□□□□□ -0.64
SSN3YPL042C TY1B-AO13527 1196 aaKnown RBP11.06□□□□□ -0.64
SSN3YPL042C TAF1P46677 1066 aa11.06□□□□□ -0.64
SSN3YPL042C VPS4P52917 437 aa11.06□□□□□ -0.64
SSN3YPL042C RCF1Q03713 159 aa11.06□□□□□ -0.64
SSN3YPL042C GYP5Q12344 894 aa11.06□□□□□ -0.64
SSN3YPL042C NOT3P06102 836 aaKnown RBP11.05□□□□□ -0.64
SSN3YPL042C SLD2P34252 453 aa11.05□□□□□ -0.64
SSN3YPL042C ECM21P38167 1117 aaKnown RBP11.05□□□□□ -0.64
SSN3YPL042C RIX1P38883 763 aaPredicted RBP11.05□□□□□ -0.64
SSN3YPL042C TPM2P40414 161 aa11.05□□□□□ -0.64
SSN3YPL042C TMA64Q04600 565 aaKnown RBP11.05□□□□□ -0.64
SSN3YPL042C BDF2Q07442 638 aa11.05□□□□□ -0.64
SSN3YPL042C PDR18P53756 1333 aa11.05□□□□□ -0.64
SSN3YPL042C SLA1P32790 1244 aa11.04□□□□□ -0.64
SSN3YPL042C BLI1P35727 113 aa11.04□□□□□ -0.64
SSN3YPL042C YGL242CP53066 181 aa11.04□□□□□ -0.64
SSN3YPL042C UBP16Q02863 499 aa11.04□□□□□ -0.64
SSN3YPL042C OPI1P21957 404 aa11.04□□□□□ -0.64
SSN3YPL042C RAD51P25454 400 aa11.04□□□□□ -0.64
SSN3YPL042C SUB2Q07478 446 aaKnown RBP11.04□□□□□ -0.64
SSN3YPL042C MFT1P33441 392 aaKnown RBP11.03□□□□□ -0.64
SSN3YPL042C KTR3P38130 404 aaPredicted RBP11.03□□□□□ -0.64
SSN3YPL042C MLC1P53141 149 aa11.03□□□□□ -0.64
SSN3YPL042C APL5Q08951 932 aaKnown RBP11.03□□□□□ -0.64
SSN3YPL042C CLF1Q12309 687 aaPredicted RBP11.03□□□□□ -0.64
SSN3YPL042C ADR1P07248 1323 aa11.02□□□□□ -0.64
SSN3YPL042C YIR014WP40570 242 aa11.02□□□□□ -0.64
SSN3YPL042C SYF1Q04048 859 aaPredicted RBP11.02□□□□□ -0.64
SSN3YPL042C SEC18P18759 758 aaKnown RBP11.01□□□□□ -0.65
SSN3YPL042C SPB4P25808 606 aaPredicted RBP11.01□□□□□ -0.65
SSN3YPL042C YGR130CP53278 816 aa11.01□□□□□ -0.65
SSN3YPL042C GCR2Q01722 534 aa11.01□□□□□ -0.65
SSN3YPL042C ALO1P54783 526 aaKnown RBP11.01□□□□□ -0.65
SSN3YPL042C CEF1Q03654 590 aaPredicted RBP11.01□□□□□ -0.65
SSN3YPL042C AI2P03876 854 aa11□□□□□ -0.65
SSN3YPL042C PFF1P38244 976 aa11□□□□□ -0.65
SSN3YPL042C IES1P43579 692 aa11□□□□□ -0.65
SSN3YPL042C DPH6Q12429 685 aa11□□□□□ -0.65
SSN3YPL042C ERP4Q12450 207 aa11□□□□□ -0.65
SSN3YPL042C VAS1P07806 1104 aaKnown RBP10.99□□□□□ -0.65
SSN3YPL042C SEC27P41811 889 aaKnown RBP10.99□□□□□ -0.65
SSN3YPL042C IRC3Q06683 689 aa10.99□□□□□ -0.65
SSN3YPL042C PMD1P32634 1753 aa10.99□□□□□ -0.65
SSN3YPL042C POM152P39685 1337 aa10.99□□□□□ -0.65
SSN3YPL042C SPC110P32380 944 aa10.98□□□□□ -0.65
SSN3YPL042C NGR1P32831 672 aaKnown RBP10.98□□□□□ -0.65
SSN3YPL042C MRPS35P53292 345 aa10.98□□□□□ -0.65
SSN3YPL042C HEL2Q05580 639 aaKnown RBP10.98□□□□□ -0.65
SSN3YPL042C TSR4P25040 408 aa10.98□□□□□ -0.65
SSN3YPL042C DLD1P32891 587 aa10.98□□□□□ -0.65
SSN3YPL042C SPT21P35209 758 aa10.98□□□□□ -0.65
SSN3YPL042C RMD1Q03441 430 aa10.98□□□□□ -0.65
SSN3YPL042C RPN7Q06103 429 aaKnown RBP10.98□□□□□ -0.65
SSN3YPL042C THI3Q07471 609 aa10.98□□□□□ -0.65
SSN3YPL042C SIT4P20604 311 aa10.97□□□□□ -0.65
SSN3YPL042C ICP55P40051 511 aa10.97□□□□□ -0.65
SSN3YPL042C YNL193WP53870 558 aa10.97□□□□□ -0.65
SSN3YPL042C TY4B-PA0A0B7P3V8 1104 aa10.96□□□□□ -0.65
SSN3YPL042C PWP2P25635 923 aaKnown RBP10.96□□□□□ -0.65
SSN3YPL042C MGM1P32266 881 aa10.96□□□□□ -0.65
SSN3YPL042C FRD1P32614 470 aaKnown RBP10.96□□□□□ -0.65
SSN3YPL042C NFU1P32860 256 aa10.96□□□□□ -0.65
SSN3YPL042C YGL081WP53156 320 aa10.96□□□□□ -0.65
SSN3YPL042C SRC1Q03707 834 aa10.96□□□□□ -0.65
SSN3YPL042C YLR257WQ06146 321 aaKnown RBP10.96□□□□□ -0.65
SSN3YPL042C TY4A-HQ6Q5P6 413 aa10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms