RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	MAK21	Q12176	1025 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	SLP1	Q12232	587 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	MAM3	Q12296	706 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	IRC20	Q06554	1556 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	SWI1	P09547	1314 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	SEC14	P24280	304 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	CDC10	P25342	322 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	PSE1	P32337	1089 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	DPH5	P32469	300 aa	Predicted RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TRM44	YPL030W	OLA1	P38219	394 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	EFM2	P38347	419 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	VHR2	P40041	505 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	YRB1	P41920	201 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	YNL035C	P53962	389 aa	Known RBP	4.97	□□□□□ -1.61
TRM44	YPL030W	CTF4	Q01454	927 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	HEH2	Q03281	663 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	ITT1	Q04638	464 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	AIM7	Q12156	149 aa		4.97	□□□□□ -1.61
TRM44	YPL030W	TSC11	P40061	1430 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	KIN1	P13185	1064 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	MRPS28	P21771	286 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	PWP2	P25635	923 aa	Known RBP	4.96	□□□□□ -1.62
TRM44	YPL030W	MRF1	P30775	413 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM44	YPL030W	SAS3	P34218	831 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	ERC1	P38767	581 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	MET10	P39692	1035 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	YEL023C	P39992	682 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	FKH1	P40466	484 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	MET18	P40469	1032 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	LSG1	P53145	640 aa	Known RBP	4.96	□□□□□ -1.62
TRM44	YPL030W	NOP15	P53927	220 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM44	YPL030W	DNM1	P54861	757 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TRM44	YPL030W	AVO1	Q08236	1176 aa		4.96	□□□□□ -1.62
TRM44	YPL030W	CLP1	Q08685	445 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM44	YPL030W	MON2	P48563	1636 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM44	YPL030W	ARD1	P07347	238 aa	Predicted RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	PET494	P07390	489 aa	Predicted RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	MAK16	P10962	306 aa	Predicted RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	RPB4	P20433	221 aa	Predicted RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	SMY1	P32364	656 aa	Known RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	RTG1	P32607	177 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	PTC4	P38089	393 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	SPC72	P39723	622 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	RTF1	P53064	558 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	YGL140C	P53120	1219 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	UTP13	Q05946	817 aa	Known RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	TSR1	Q07381	788 aa	Known RBP	4.95	□□□□□ -1.62
TRM44	YPL030W	ERP4	Q12450	207 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	TRS33	Q99394	268 aa		4.95	□□□□□ -1.62
TRM44	YPL030W	SEC15	P22224	910 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	PKC1	P24583	1151 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	UBP1	P25037	809 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	SEC61	P32915	480 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	YEL1	P34225	687 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	RRP1	P35178	278 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM44	YPL030W	SWD1	P39706	426 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	BOI2	P39969	1040 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	SIT1	P39980	628 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	YIR042C	P40586	236 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	SRP1	Q02821	542 aa	Known RBP	4.94	□□□□□ -1.62
TRM44	YPL030W	PNG1	Q02890	363 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	YMR102C	Q03177	834 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	UBX2	Q04228	584 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	LCD1	Q04377	747 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	YMR111C	Q04461	462 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM44	YPL030W	FUS2	Q05670	677 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	TRM3	Q07527	1436 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	PPH3	P32345	308 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	NIP100	P33420	868 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	TOM20	P35180	183 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	MET1	P36150	593 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	TBS1	P38114	1094 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	SSZ1	P38788	538 aa	Known RBP	4.94	□□□□□ -1.62
TRM44	YPL030W	YHR218W	P38899	603 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	FAF1	P40546	346 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM44	YPL030W	INP52	P50942	1183 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	RSM28	Q03430	361 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	ARO80	Q04052	950 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	TAP42	Q04372	366 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	SML1	Q04964	104 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	YDL121C	Q07541	149 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	RKM4	Q12504	494 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	RTC1	Q08281	1341 aa		4.94	□□□□□ -1.62
TRM44	YPL030W	THO2	P53552	1597 aa	Known RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	CDC37	P06101	506 aa	Known RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	SEN2	P16658	377 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	RPA135	P22138	1203 aa	Known RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	VMA4	P22203	233 aa	Known RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
TRM44	YPL030W	CDC48	P25694	835 aa	Known RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	TFC3	P34111	1160 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	MRP8	P35719	219 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	MRPL40	P36534	297 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	HSM3	P38348	480 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	CEP3	P40969	608 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	STU2	P46675	888 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	YGR273C	P53329	174 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	ASI1	P54074	624 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms