RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W IRC4Q03036 179 aa10.12□□□□□ -0.79
AMF1YOR378W LCB1P25045 558 aaKnown RBP10.11□□□□□ -0.79
AMF1YOR378W TIF4632P39936 914 aaKnown RBP10.11□□□□□ -0.79
AMF1YOR378W RIM20Q12033 661 aa10.11□□□□□ -0.79
AMF1YOR378W DLD1P32891 587 aa10.1□□□□□ -0.79
AMF1YOR378W PIB2P53191 635 aa10.1□□□□□ -0.79
AMF1YOR378W FPR4Q06205 392 aaPredicted RBP10.1□□□□□ -0.79
AMF1YOR378W STM1P39015 273 aaKnown RBP10.09□□□□□ -0.79
AMF1YOR378W SET4P42948 560 aa10.09□□□□□ -0.79
AMF1YOR378W INM2Q05533 292 aa10.09□□□□□ -0.79
AMF1YOR378W TOP1P04786 769 aa10.08□□□□□ -0.8
AMF1YOR378W SHC1P39000 512 aa10.08□□□□□ -0.8
AMF1YOR378W YIR042CP40586 236 aa10.08□□□□□ -0.8
AMF1YOR378W FIG2P25653 1609 aa10.08□□□□□ -0.8
AMF1YOR378W DUR1,2P32528 1835 aaKnown RBP10.08□□□□□ -0.8
AMF1YOR378W AAP1P37898 856 aaKnown RBP10.07□□□□□ -0.8
AMF1YOR378W YIR014WP40570 242 aa10.07□□□□□ -0.8
AMF1YOR378W YFH7P43591 353 aa10.07□□□□□ -0.8
AMF1YOR378W JJJ2P46997 583 aa10.07□□□□□ -0.8
AMF1YOR378W DPL1Q05567 589 aa10.07□□□□□ -0.8
AMF1YOR378W CYB2P00175 591 aa10.07□□□□□ -0.8
AMF1YOR378W HXT13P39924 564 aa10.07□□□□□ -0.8
AMF1YOR378W ENP2P48234 707 aaKnown RBP10.07□□□□□ -0.8
AMF1YOR378W HXT17P53631 564 aa10.07□□□□□ -0.8
AMF1YOR378W PRP42Q03776 544 aaKnown RBP10.07□□□□□ -0.8
AMF1YOR378W SSA1P10591 642 aaKnown RBP10.06□□□□□ -0.8
AMF1YOR378W OPI1P21957 404 aa10.06□□□□□ -0.8
AMF1YOR378W RPT3P33298 428 aaKnown RBP10.06□□□□□ -0.8
AMF1YOR378W NPL4P33755 580 aa10.06□□□□□ -0.8
AMF1YOR378W GEF1P37020 779 aa10.06□□□□□ -0.8
AMF1YOR378W YMR147WP40218 223 aaKnown RBP10.06□□□□□ -0.8
AMF1YOR378W TOS4Q06266 489 aa10.06□□□□□ -0.8
AMF1YOR378W WRS1Q12109 432 aaKnown RBP10.06□□□□□ -0.8
AMF1YOR378W FAS2P19097 1887 aaKnown RBP10.05□□□□□ -0.8
AMF1YOR378W GSM1P42950 618 aa10.05□□□□□ -0.8
AMF1YOR378W BBC1P47068 1157 aa10.05□□□□□ -0.8
AMF1YOR378W DIP2Q12220 943 aaPredicted RBP10.05□□□□□ -0.8
AMF1YOR378W TPM1P17536 199 aaKnown RBP10.04□□□□□ -0.8
AMF1YOR378W PTK1P36002 662 aaPredicted RBP10.04□□□□□ -0.8
AMF1YOR378W GRX7P38068 203 aa10.04□□□□□ -0.8
AMF1YOR378W GAS5Q08193 484 aa10.04□□□□□ -0.8
AMF1YOR378W RRG1Q12167 365 aaPredicted RBP10.04□□□□□ -0.8
AMF1YOR378W HKR1P41809 1802 aa10.03□□□□□ -0.8
AMF1YOR378W IRC8P47046 822 aa10.03□□□□□ -0.8
AMF1YOR378W TAH18Q12181 623 aa10.03□□□□□ -0.8
AMF1YOR378W ARG82P07250 355 aa10.02□□□□□ -0.8
AMF1YOR378W BOI1P38041 980 aaKnown RBP10.02□□□□□ -0.8
AMF1YOR378W IOC3P43596 787 aa10.02□□□□□ -0.8
AMF1YOR378W SQS1P53866 767 aaKnown RBP10.02□□□□□ -0.8
AMF1YOR378W PKH3Q03306 898 aaPredicted RBP10.02□□□□□ -0.8
AMF1YOR378W KAR5Q04746 504 aa10.02□□□□□ -0.8
AMF1YOR378W ATG20Q07528 640 aa10.02□□□□□ -0.8
AMF1YOR378W MDL2P33311 773 aa10.02□□□□□ -0.81
AMF1YOR378W FPK1P53739 893 aa10.02□□□□□ -0.81
AMF1YOR378W ACK1Q07622 623 aaPredicted RBP10.02□□□□□ -0.81
AMF1YOR378W LAM4P38800 1345 aa10.01□□□□□ -0.81
AMF1YOR378W SNF3P10870 884 aa10.01□□□□□ -0.81
AMF1YOR378W MSM1P22438 575 aa10.01□□□□□ -0.81
AMF1YOR378W AFG2P32794 780 aa10.01□□□□□ -0.81
AMF1YOR378W CRF1Q04930 467 aa10.01□□□□□ -0.81
AMF1YOR378W MET1P36150 593 aa10□□□□□ -0.81
AMF1YOR378W APL6P46682 809 aa9.99□□□□□ -0.81
AMF1YOR378W PIP2P52960 996 aa9.99□□□□□ -0.81
AMF1YOR378W PUS6P53294 404 aa9.99□□□□□ -0.81
AMF1YOR378W SSF2Q12153 453 aaPredicted RBP9.99□□□□□ -0.81
AMF1YOR378W RPS7AP26786 190 aaKnown RBP9.98□□□□□ -0.81
AMF1YOR378W TRL1P09880 827 aaKnown RBP9.97□□□□□ -0.81
AMF1YOR378W RNR2P09938 399 aaKnown RBP9.97□□□□□ -0.81
AMF1YOR378W RRP8P38961 392 aaKnown RBP9.97□□□□□ -0.81
AMF1YOR378W SPO22P40511 975 aa9.97□□□□□ -0.81
AMF1YOR378W KRI1P42846 591 aaKnown RBP9.97□□□□□ -0.81
AMF1YOR378W RLF2Q12495 606 aa9.97□□□□□ -0.81
AMF1YOR378W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
AMF1YOR378W SLI15P38283 698 aa9.97□□□□□ -0.81
AMF1YOR378W PPM2Q08282 695 aa9.97□□□□□ -0.81
AMF1YOR378W FLO11P08640 1367 aa9.96□□□□□ -0.81
AMF1YOR378W COQ1P18900 473 aa9.96□□□□□ -0.82
AMF1YOR378W CIC1P38779 376 aaKnown RBP9.96□□□□□ -0.82
AMF1YOR378W SLN1P39928 1220 aaPredicted RBP9.96□□□□□ -0.82
AMF1YOR378W AIM9P40053 627 aaKnown RBP9.96□□□□□ -0.82
AMF1YOR378W SEN54Q02825 467 aaPredicted RBP9.96□□□□□ -0.82
AMF1YOR378W OPY1P38271 328 aa9.95□□□□□ -0.82
AMF1YOR378W TRM44Q02648 567 aaKnown RBP9.95□□□□□ -0.82
AMF1YOR378W PCT1P13259 424 aa9.94□□□□□ -0.82
AMF1YOR378W GLC3P32775 704 aa9.94□□□□□ -0.82
AMF1YOR378W RTS1P38903 757 aa9.94□□□□□ -0.82
AMF1YOR378W TIM50Q02776 476 aa9.94□□□□□ -0.82
AMF1YOR378W SPN1Q06505 410 aaPredicted RBP9.94□□□□□ -0.82
AMF1YOR378W SRS2P12954 1174 aa9.93□□□□□ -0.82
AMF1YOR378W PEP3P27801 918 aa9.93□□□□□ -0.82
AMF1YOR378W CRG1P38892 291 aaRIP-Chip data9.93□□□□□ -0.82 RIP-Chip
AMF1YOR378W IMP2'P32351 346 aa9.92□□□□□ -0.82
AMF1YOR378W YJL171CP46992 396 aa9.92□□□□□ -0.82
AMF1YOR378W VPS4P52917 437 aa9.92□□□□□ -0.82
AMF1YOR378W NSG2P53898 299 aa9.92□□□□□ -0.82
AMF1YOR378W RPS15Q01855 142 aaKnown RBP9.92□□□□□ -0.82
AMF1YOR378W MRD1Q06106 887 aaKnown RBP9.92□□□□□ -0.82
AMF1YOR378W YPL260WQ08977 551 aa9.92□□□□□ -0.82
AMF1YOR378W PGA3Q12746 312 aaKnown RBP9.92□□□□□ -0.82
AMF1YOR378W FLO1P32768 1537 aa9.92□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms