RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W GSY2P27472 705 aa6.74□□□□□ -1.33
VPS5YOR069W SRP40P32583 406 aaPredicted RBP6.74□□□□□ -1.33
VPS5YOR069W RIM101P33400 625 aa6.74□□□□□ -1.33
VPS5YOR069W DEF1P35732 738 aaKnown RBP6.74□□□□□ -1.33
VPS5YOR069W YPT11P48559 417 aa6.74□□□□□ -1.33
VPS5YOR069W MRPS35P53292 345 aa6.74□□□□□ -1.33
VPS5YOR069W RBA50Q04418 439 aa6.74□□□□□ -1.33
VPS5YOR069W NSE3Q05541 303 aa6.74□□□□□ -1.33
VPS5YOR069W PSK2Q08217 1101 aa6.74□□□□□ -1.33
VPS5YOR069W STE11P23561 717 aa6.74□□□□□ -1.33
VPS5YOR069W YCG1Q06680 1035 aa6.74□□□□□ -1.33
VPS5YOR069W APL4Q12028 832 aa6.74□□□□□ -1.33
VPS5YOR069W RAD4P14736 754 aa6.73□□□□□ -1.33
VPS5YOR069W CDC15P27636 974 aa6.73□□□□□ -1.33
VPS5YOR069W SWH1P35845 1188 aa6.73□□□□□ -1.33
VPS5YOR069W VID28P40547 921 aa6.73□□□□□ -1.33
VPS5YOR069W YGL242CP53066 181 aa6.73□□□□□ -1.33
VPS5YOR069W MCM16Q12262 181 aa6.73□□□□□ -1.33
VPS5YOR069W SRP54P20424 541 aaKnown RBP6.72□□□□□ -1.33
VPS5YOR069W RGD1P38339 666 aa6.72□□□□□ -1.33
VPS5YOR069W REI1P38344 393 aaPredicted RBP6.72□□□□□ -1.33
VPS5YOR069W CTK3P46963 296 aaPredicted RBP6.72□□□□□ -1.33
VPS5YOR069W APT1P49435 187 aaKnown RBP6.72□□□□□ -1.33
VPS5YOR069W SWI1P09547 1314 aa6.72□□□□□ -1.33
VPS5YOR069W UBC1P21734 215 aaKnown RBP6.72□□□□□ -1.33
VPS5YOR069W UGA3P26370 528 aa6.72□□□□□ -1.33
VPS5YOR069W BYE1P36106 594 aa6.72□□□□□ -1.33
VPS5YOR069W YDR306CQ06640 478 aa6.72□□□□□ -1.33
VPS5YOR069W YPL225WQ08971 146 aaKnown RBP6.72□□□□□ -1.33
VPS5YOR069W RRP1P35178 278 aaPredicted RBP6.71□□□□□ -1.33
VPS5YOR069W RFC5P38251 354 aa6.71□□□□□ -1.33
VPS5YOR069W STR2P47164 639 aa6.71□□□□□ -1.33
VPS5YOR069W VPS75P53853 264 aa6.71□□□□□ -1.33
VPS5YOR069W YNL035CP53962 389 aaKnown RBP6.71□□□□□ -1.33
VPS5YOR069W YHL017WP38745 532 aa6.71□□□□□ -1.34
VPS5YOR069W CCT4P39078 528 aaKnown RBP6.71□□□□□ -1.34
VPS5YOR069W CAJ1P39101 391 aa6.71□□□□□ -1.34
VPS5YOR069W SAP1P39955 897 aaKnown RBP6.71□□□□□ -1.34
VPS5YOR069W MLC1P53141 149 aa6.71□□□□□ -1.34
VPS5YOR069W OMS1Q06668 471 aa6.71□□□□□ -1.34
VPS5YOR069W YRF1-2P40105 1681 aa6.7□□□□□ -1.34
VPS5YOR069W RRP43P25359 394 aaPredicted RBP6.7□□□□□ -1.34
VPS5YOR069W DPB3P27344 201 aa6.7□□□□□ -1.34
VPS5YOR069W KTR1P27810 393 aaKnown RBP6.7□□□□□ -1.34
VPS5YOR069W SWI3P32591 825 aa6.7□□□□□ -1.34
VPS5YOR069W PSY4P38193 441 aa6.7□□□□□ -1.34
VPS5YOR069W NDC80P40460 691 aa6.7□□□□□ -1.34
VPS5YOR069W ALO1P54783 526 aaKnown RBP6.7□□□□□ -1.34
VPS5YOR069W VPS72Q03388 795 aa6.7□□□□□ -1.34
VPS5YOR069W PGA3Q12746 312 aaKnown RBP6.7□□□□□ -1.34
VPS5YOR069W CAF130P53280 1122 aaPredicted RBP6.69□□□□□ -1.34
VPS5YOR069W YNR029CP53729 429 aaKnown RBP6.69□□□□□ -1.34
VPS5YOR069W DOS2P54858 310 aa6.69□□□□□ -1.34
VPS5YOR069W PUS1Q12211 544 aaKnown RBP6.69□□□□□ -1.34
VPS5YOR069W RPO26P20435 155 aa6.69□□□□□ -1.34
VPS5YOR069W YKT6P36015 200 aaKnown RBP6.69□□□□□ -1.34
VPS5YOR069W NUP133P36161 1157 aa6.69□□□□□ -1.34
VPS5YOR069W CIC1P38779 376 aaKnown RBP6.69□□□□□ -1.34
VPS5YOR069W STM1P39015 273 aaKnown RBP6.69□□□□□ -1.34
VPS5YOR069W CTF4Q01454 927 aa6.69□□□□□ -1.34
VPS5YOR069W MUD2P36084 527 aaKnown RBP6.68□□□□□ -1.34
VPS5YOR069W SAP190P36123 1033 aa6.68□□□□□ -1.34
VPS5YOR069W BUD6P41697 788 aa6.68□□□□□ -1.34
VPS5YOR069W YKE2P52553 114 aa6.68□□□□□ -1.34
VPS5YOR069W PIB2P53191 635 aa6.68□□□□□ -1.34
VPS5YOR069W MAL13P53338 473 aa6.68□□□□□ -1.34
VPS5YOR069W ZDS2P54786 942 aa6.68□□□□□ -1.34
VPS5YOR069W TMA16Q08687 178 aa6.68□□□□□ -1.34
VPS5YOR069W ISW2Q08773 1120 aa6.68□□□□□ -1.34
VPS5YOR069W RRP5Q05022 1729 aaKnown RBP6.68□□□□□ -1.34
VPS5YOR069W PDC1P06169 563 aaKnown RBP6.67□□□□□ -1.34
VPS5YOR069W SPT2P06843 333 aaPredicted RBP6.67□□□□□ -1.34
VPS5YOR069W KCC4P25389 1037 aa6.67□□□□□ -1.34
VPS5YOR069W STO1P34160 861 aaKnown RBP6.67□□□□□ -1.34
VPS5YOR069W KTR3P38130 404 aaPredicted RBP6.67□□□□□ -1.34
VPS5YOR069W RFT1P38206 574 aaPredicted RBP6.67□□□□□ -1.34
VPS5YOR069W SSF1P38789 453 aaPredicted RBP6.67□□□□□ -1.34
VPS5YOR069W SEC39Q12745 709 aa6.67□□□□□ -1.34
VPS5YOR069W SEC9P40357 651 aa6.67□□□□□ -1.34
VPS5YOR069W ATG23Q06671 453 aa6.67□□□□□ -1.34
VPS5YOR069W RUD3Q12234 484 aaKnown RBP6.67□□□□□ -1.34
VPS5YOR069W MATALPHA2P0CY08 210 aa6.66□□□□□ -1.34
VPS5YOR069W HMLALPHA2P0CY09 210 aa6.66□□□□□ -1.34
VPS5YOR069W PHO13P19881 312 aa6.66□□□□□ -1.34
VPS5YOR069W YEL043WP32618 956 aa6.66□□□□□ -1.34
VPS5YOR069W SPT8P38915 602 aa6.66□□□□□ -1.34
VPS5YOR069W UBP12P39538 1254 aa6.66□□□□□ -1.34
VPS5YOR069W SFH1Q06168 426 aa6.66□□□□□ -1.34
VPS5YOR069W ATG9Q12142 997 aa6.66□□□□□ -1.34
VPS5YOR069W MCM4P30665 933 aaKnown RBP6.66□□□□□ -1.34
VPS5YOR069W FBP26P32604 452 aa6.66□□□□□ -1.34
VPS5YOR069W ECM32P32644 1121 aaKnown RBP6.66□□□□□ -1.34
VPS5YOR069W CST6P40535 587 aa6.66□□□□□ -1.34
VPS5YOR069W VPS4P52917 437 aa6.66□□□□□ -1.34
VPS5YOR069W ALF1P53904 254 aa6.66□□□□□ -1.34
VPS5YOR069W DNM1P54861 757 aa6.66□□□□□ -1.34
VPS5YOR069W ITT1Q04638 464 aa6.66□□□□□ -1.34
VPS5YOR069W VPS38Q05919 439 aa6.66□□□□□ -1.34
VPS5YOR069W YOL098CQ12496 1037 aa6.66□□□□□ -1.34
VPS5YOR069W RIO2P40160 425 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms