RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI2	YOL117W	ERP5	P38819	212 aa		4.83	□□□□□ -1.64
RRI2	YOL117W	MDJ2	P42834	146 aa		4.83	□□□□□ -1.64
RRI2	YOL117W	STB3	Q12427	513 aa		4.83	□□□□□ -1.64
RRI2	YOL117W	ACF4	P47129	309 aa		4.82	□□□□□ -1.64
RRI2	YOL117W	CUS1	Q02554	436 aa	Predicted RBP	4.82	□□□□□ -1.64
RRI2	YOL117W	YMR265C	Q03508	461 aa	Known RBP	4.82	□□□□□ -1.64
RRI2	YOL117W	HPF1	Q05164	967 aa		4.82	□□□□□ -1.64
RRI2	YOL117W	RPB10	P22139	70 aa		4.82	□□□□□ -1.64
RRI2	YOL117W	LDH1	P38139	375 aa		4.82	□□□□□ -1.64
RRI2	YOL117W	SSF1	P38789	453 aa	Predicted RBP	4.82	□□□□□ -1.64
RRI2	YOL117W	DYS1	P38791	387 aa		4.82	□□□□□ -1.64
RRI2	YOL117W	QDR1	P40475	563 aa		4.82	□□□□□ -1.64
RRI2	YOL117W	KRE33	P53914	1056 aa	Known RBP	4.82	□□□□□ -1.64
RRI2	YOL117W	MSN1	P22148	382 aa		4.81	□□□□□ -1.64
RRI2	YOL117W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
RRI2	YOL117W	YNR040W	P53736	256 aa		4.81	□□□□□ -1.64
RRI2	YOL117W	YOR296W	Q08748	1289 aa		4.81	□□□□□ -1.64
RRI2	YOL117W	YBL113C	Q7M4S9	792 aa		4.81	□□□□□ -1.64
RRI2	YOL117W	GLO3	P38682	493 aa	Known RBP	4.8	□□□□□ -1.64
RRI2	YOL117W	HXT8	P40886	569 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	LYS5	P50113	272 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	ADE12	P80210	433 aa	Known RBP	4.8	□□□□□ -1.64
RRI2	YOL117W	BSD2	P38356	321 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	APM2	P38700	605 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	RGD2	P43556	714 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	JJJ3	P47138	172 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	ITC1	P53125	1264 aa		4.8	□□□□□ -1.64
RRI2	YOL117W	GIP1	P38229	639 aa		4.79	□□□□□ -1.64
RRI2	YOL117W	CEM1	P39525	442 aa		4.79	□□□□□ -1.64
RRI2	YOL117W	NOP8	Q08287	484 aa	Predicted RBP	4.79	□□□□□ -1.64
RRI2	YOL117W	MNL2	Q12205	849 aa		4.79	□□□□□ -1.64
RRI2	YOL117W	TY1A-DR2	Q03964	440 aa	Known RBP	4.78	□□□□□ -1.64
RRI2	YOL117W	DPH6	Q12429	685 aa		4.78	□□□□□ -1.64
RRI2	YOL117W	RPP1A	P05318	106 aa	Predicted RBP	4.78	□□□□□ -1.64
RRI2	YOL117W	FPS1	P23900	669 aa		4.78	□□□□□ -1.64
RRI2	YOL117W	ISW1	P38144	1129 aa		4.78	□□□□□ -1.64
RRI2	YOL117W	NTA1	P40354	457 aa		4.78	□□□□□ -1.64
RRI2	YOL117W	SUT1	P53032	299 aa	Known RBP	4.78	□□□□□ -1.64
RRI2	YOL117W	HEH2	Q03281	663 aa		4.77	□□□□□ -1.65
RRI2	YOL117W	EMG1	Q06287	252 aa	Known RBP	4.77	□□□□□ -1.65
RRI2	YOL117W	FRT1	Q99332	602 aa		4.77	□□□□□ -1.65
RRI2	YOL117W	GRS1	P38088	690 aa	Known RBP	4.76	□□□□□ -1.65
RRI2	YOL117W	NCL1	P38205	684 aa	Known RBP	4.76	□□□□□ -1.65
RRI2	YOL117W	YIL165C	P40446	119 aa		4.76	□□□□□ -1.65
RRI2	YOL117W	YGR035C	P53222	116 aa		4.76	□□□□□ -1.65
RRI2	YOL117W	SEN54	Q02825	467 aa	Predicted RBP	4.76	□□□□□ -1.65
RRI2	YOL117W	YML020W	Q03722	664 aa		4.76	□□□□□ -1.65
RRI2	YOL117W	TRS120	Q04183	1289 aa		4.76	□□□□□ -1.65
RRI2	YOL117W	SMC1	P32908	1225 aa		4.76	□□□□□ -1.65
RRI2	YOL117W	YER156C	P40093	338 aa	Known RBP	4.76	□□□□□ -1.65
RRI2	YOL117W	RSC4	Q02206	625 aa		4.75	□□□□□ -1.65
RRI2	YOL117W	NUT2	Q06213	157 aa		4.75	□□□□□ -1.65
RRI2	YOL117W	GPI13	Q07830	1017 aa		4.75	□□□□□ -1.65
RRI2	YOL117W	GPM1	P00950	247 aa	Known RBP	4.74	□□□□□ -1.65
RRI2	YOL117W	IDI1	P15496	288 aa		4.74	□□□□□ -1.65
RRI2	YOL117W	TRK2	P28584	889 aa		4.74	□□□□□ -1.65
RRI2	YOL117W	PRK1	P40494	810 aa		4.74	□□□□□ -1.65
RRI2	YOL117W	UFD2	P54860	961 aa		4.74	□□□□□ -1.65
RRI2	YOL117W	TIF6	Q12522	245 aa	Known RBP	4.74	□□□□□ -1.65
RRI2	YOL117W	RAD55	P38953	406 aa		4.74	□□□□□ -1.65
RRI2	YOL117W	FIR1	P40020	876 aa		4.74	□□□□□ -1.65
RRI2	YOL117W	MSC6	Q08818	692 aa	Known RBP	4.74	□□□□□ -1.65
RRI2	YOL117W	MRP10	O75012	95 aa		4.73	□□□□□ -1.65
RRI2	YOL117W	IRS4	P36115	615 aa	Known RBP	4.73	□□□□□ -1.65
RRI2	YOL117W	YHL050C	P38721	697 aa		4.73	□□□□□ -1.65
RRI2	YOL117W	YHR219W	P38900	624 aa		4.73	□□□□□ -1.65
RRI2	YOL117W	STM1	P39015	273 aa	Known RBP	4.73	□□□□□ -1.65
RRI2	YOL117W	PSY2	P40164	858 aa		4.73	□□□□□ -1.65
RRI2	YOL117W	PDC5	P16467	563 aa	Known RBP	4.72	□□□□□ -1.65
RRI2	YOL117W	KNS1	P32350	737 aa	Predicted RBP	4.72	□□□□□ -1.65
RRI2	YOL117W	CTR9	P89105	1077 aa		4.72	□□□□□ -1.65
RRI2	YOL117W	YBR287W	P38355	427 aa		4.71	□□□□□ -1.66
RRI2	YOL117W	PPX1	P38698	397 aa		4.71	□□□□□ -1.66
RRI2	YOL117W	AIM46	P38885	310 aa		4.71	□□□□□ -1.66
RRI2	YOL117W	YNL011C	P53980	444 aa		4.71	□□□□□ -1.66
RRI2	YOL117W	CDC55	Q00362	526 aa		4.7	□□□□□ -1.66
RRI2	YOL117W	IPL1	P38991	367 aa		4.7	□□□□□ -1.66
RRI2	YOL117W	YFL066C	P43538	392 aa		4.7	□□□□□ -1.66
RRI2	YOL117W	WHI5	Q12416	295 aa		4.7	□□□□□ -1.66
RRI2	YOL117W	COB	P00163	385 aa		4.69	□□□□□ -1.66
RRI2	YOL117W	MET4	P32389	672 aa		4.69	□□□□□ -1.66
RRI2	YOL117W	PPT1	P53043	513 aa		4.68	□□□□□ -1.66
RRI2	YOL117W	BIO5	P53744	561 aa	Known RBP	4.68	□□□□□ -1.66
RRI2	YOL117W	PHO4	P07270	312 aa	Known RBP	4.67	□□□□□ -1.66
RRI2	YOL117W	HVG1	P0CE11	249 aa		4.67	□□□□□ -1.66
RRI2	YOL117W	SEC20	P28791	383 aa		4.67	□□□□□ -1.66
RRI2	YOL117W	PYC2	P32327	1180 aa	Known RBP	4.67	□□□□□ -1.66
RRI2	YOL117W	DUR3	P33413	735 aa		4.67	□□□□□ -1.66
RRI2	YOL117W	SLD2	P34252	453 aa		4.67	□□□□□ -1.66
RRI2	YOL117W	INP51	P40559	946 aa	Known RBP	4.67	□□□□□ -1.66
RRI2	YOL117W	RSC2	Q06488	889 aa		4.67	□□□□□ -1.66
RRI2	YOL117W	NAR1	P23503	491 aa	Known RBP	4.66	□□□□□ -1.66
RRI2	YOL117W	TFA2	P36145	328 aa		4.66	□□□□□ -1.66
RRI2	YOL117W	AMN1	P38285	549 aa	Predicted RBP	4.66	□□□□□ -1.66
RRI2	YOL117W	ALD3	P54114	506 aa		4.66	□□□□□ -1.66
RRI2	YOL117W	GIS4	Q04233	774 aa		4.66	□□□□□ -1.66
RRI2	YOL117W	BSC2	Q05611	235 aa		4.66	□□□□□ -1.66
RRI2	YOL117W	FLP1	P03870	423 aa		4.65	□□□□□ -1.67
RRI2	YOL117W	AI1	P03875	834 aa		4.65	□□□□□ -1.67
RRI2	YOL117W	FUS1	P11710	512 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms