RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W LCB1P25045 558 aaKnown RBP17.2■□□□□ 0.34
SHR5YOL110W PBY1P38254 753 aa17.2■□□□□ 0.34
SHR5YOL110W EPS1P40557 701 aa17.2■□□□□ 0.34
SHR5YOL110W SET4P42948 560 aa17.2■□□□□ 0.34
SHR5YOL110W PSF3Q12146 194 aa17.2■□□□□ 0.34
SHR5YOL110W SSA1P10591 642 aaKnown RBP17.19■□□□□ 0.34
SHR5YOL110W BRN1P38170 754 aa17.19■□□□□ 0.34
SHR5YOL110W SHC1P39000 512 aa17.19■□□□□ 0.34
SHR5YOL110W KTR1P27810 393 aaKnown RBP17.18■□□□□ 0.34
SHR5YOL110W GCR2Q01722 534 aa17.18■□□□□ 0.34
SHR5YOL110W OSH3P38713 996 aaKnown RBP17.17■□□□□ 0.34
SHR5YOL110W YIR042CP40586 236 aa17.17■□□□□ 0.34
SHR5YOL110W JJJ2P46997 583 aa17.17■□□□□ 0.34
SHR5YOL110W INM2Q05533 292 aa17.17■□□□□ 0.34
SHR5YOL110W DPL1Q05567 589 aa17.17■□□□□ 0.34
SHR5YOL110W SQS1P53866 767 aaKnown RBP17.16■□□□□ 0.34
SHR5YOL110W RIM20Q12033 661 aa17.16■□□□□ 0.34
SHR5YOL110W STM1P39015 273 aaKnown RBP17.15■□□□□ 0.34
SHR5YOL110W PIB2P53191 635 aa17.15■□□□□ 0.34
SHR5YOL110W FPR4Q06205 392 aaPredicted RBP17.15■□□□□ 0.34
SHR5YOL110W DLD1P32891 587 aa17.14■□□□□ 0.33
SHR5YOL110W RPT3P33298 428 aaKnown RBP17.14■□□□□ 0.33
SHR5YOL110W GSM1P42950 618 aa17.14■□□□□ 0.33
SHR5YOL110W YFH7P43591 353 aa17.14■□□□□ 0.33
SHR5YOL110W DIP2Q12220 943 aaPredicted RBP17.14■□□□□ 0.33
SHR5YOL110W ENP2P48234 707 aaKnown RBP17.13■□□□□ 0.33
SHR5YOL110W PRP42Q03776 544 aaKnown RBP17.13■□□□□ 0.33
SHR5YOL110W TOS4Q06266 489 aa17.13■□□□□ 0.33
SHR5YOL110W YMR147WP40218 223 aaKnown RBP17.12■□□□□ 0.33
SHR5YOL110W GAS5Q08193 484 aa17.12■□□□□ 0.33
SHR5YOL110W WRS1Q12109 432 aaKnown RBP17.12■□□□□ 0.33
SHR5YOL110W RRG1Q12167 365 aaPredicted RBP17.12■□□□□ 0.33
SHR5YOL110W CYB2P00175 591 aa17.1■□□□□ 0.33
SHR5YOL110W PTK1P36002 662 aaPredicted RBP17.1■□□□□ 0.33
SHR5YOL110W AAP1P37898 856 aaKnown RBP17.1■□□□□ 0.33
SHR5YOL110W FPK1P53739 893 aa17.1■□□□□ 0.33
SHR5YOL110W ATG20Q07528 640 aa17.1■□□□□ 0.33
SHR5YOL110W ARG82P07250 355 aa17.09■□□□□ 0.33
SHR5YOL110W OPI1P21957 404 aa17.07■□□□□ 0.32
SHR5YOL110W MSM1P22438 575 aa17.07■□□□□ 0.32
SHR5YOL110W MDL2P33311 773 aa17.07■□□□□ 0.32
SHR5YOL110W NPL4P33755 580 aa17.07■□□□□ 0.32
SHR5YOL110W GEF1P37020 779 aa17.07■□□□□ 0.32
SHR5YOL110W GRX7P38068 203 aa17.07■□□□□ 0.32
SHR5YOL110W HXT13P39924 564 aa17.07■□□□□ 0.32
SHR5YOL110W HXT17P53631 564 aa17.07■□□□□ 0.32
SHR5YOL110W AFG2P32794 780 aa17.06■□□□□ 0.32
SHR5YOL110W BOI1P38041 980 aaKnown RBP17.06■□□□□ 0.32
SHR5YOL110W IRC8P47046 822 aa17.06■□□□□ 0.32
SHR5YOL110W TPM1P17536 199 aaKnown RBP17.05■□□□□ 0.32
SHR5YOL110W BBC1P47068 1157 aa17.05■□□□□ 0.32
SHR5YOL110W ACK1Q07622 623 aaPredicted RBP17.05■□□□□ 0.32
SHR5YOL110W SLI15P38283 698 aa17.04■□□□□ 0.32
SHR5YOL110W CRF1Q04930 467 aa17.04■□□□□ 0.32
SHR5YOL110W TAH18Q12181 623 aa17.04■□□□□ 0.32
SHR5YOL110W RPS7AP26786 190 aaKnown RBP17.03■□□□□ 0.32
SHR5YOL110W IOC3P43596 787 aa17.03■□□□□ 0.32
SHR5YOL110W KAR5Q04746 504 aa17.03■□□□□ 0.32
SHR5YOL110W YIR014WP40570 242 aa17.02■□□□□ 0.32
SHR5YOL110W APL6P46682 809 aa17.02■□□□□ 0.32
SHR5YOL110W SEN54Q02825 467 aaPredicted RBP17.02■□□□□ 0.32
SHR5YOL110W PKH3Q03306 898 aaPredicted RBP17.02■□□□□ 0.32
SHR5YOL110W LAM4P38800 1345 aa17.01■□□□□ 0.31
SHR5YOL110W PUS6P53294 404 aa17.01■□□□□ 0.31
SHR5YOL110W FLO11P08640 1367 aa17.01■□□□□ 0.31
SHR5YOL110W SNF3P10870 884 aa17■□□□□ 0.31
SHR5YOL110W PIP2P52960 996 aa17■□□□□ 0.31
SHR5YOL110W MET1P36150 593 aa16.99■□□□□ 0.31
SHR5YOL110W TRM44Q02648 567 aaKnown RBP16.99■□□□□ 0.31
SHR5YOL110W RRP8P38961 392 aaKnown RBP16.98■□□□□ 0.31
SHR5YOL110W SSF2Q12153 453 aaPredicted RBP16.96■□□□□ 0.31
SHR5YOL110W GLC3P32775 704 aa16.95■□□□□ 0.3
SHR5YOL110W KRI1P42846 591 aaKnown RBP16.95■□□□□ 0.3
SHR5YOL110W TIM50Q02776 476 aa16.95■□□□□ 0.3
SHR5YOL110W FLO1P32768 1537 aa16.95■□□□□ 0.3
SHR5YOL110W FET4P40988 552 aa16.94■□□□□ 0.3
SHR5YOL110W VPS4P52917 437 aa16.94■□□□□ 0.3
SHR5YOL110W PPM2Q08282 695 aa16.94■□□□□ 0.3
SHR5YOL110W GAP1P19145 602 aaPredicted RBP16.93■□□□□ 0.3
SHR5YOL110W SKI2P35207 1287 aaKnown RBP RIP-Chip data16.93■□□□□ 0.3not detected
SHR5YOL110W STV1P37296 890 aa16.93■□□□□ 0.3
SHR5YOL110W SLN1P39928 1220 aaPredicted RBP16.93■□□□□ 0.3
SHR5YOL110W THS1P04801 734 aaKnown RBP16.92■□□□□ 0.3
SHR5YOL110W RNR2P09938 399 aaKnown RBP16.92■□□□□ 0.3
SHR5YOL110W RTG2P32608 588 aaKnown RBP16.92■□□□□ 0.3
SHR5YOL110W CIC1P38779 376 aaKnown RBP16.92■□□□□ 0.3
SHR5YOL110W COQ1P18900 473 aa16.91■□□□□ 0.3
SHR5YOL110W AIM7Q12156 149 aa16.91■□□□□ 0.3
SHR5YOL110W RLF2Q12495 606 aa16.91■□□□□ 0.3
SHR5YOL110W TRL1P09880 827 aaKnown RBP16.9■□□□□ 0.3
SHR5YOL110W SPO22P40511 975 aa16.9■□□□□ 0.3
SHR5YOL110W NSG2P53898 299 aa16.9■□□□□ 0.3
SHR5YOL110W MRD1Q06106 887 aaKnown RBP16.89■□□□□ 0.29
SHR5YOL110W YPL260WQ08977 551 aa16.89■□□□□ 0.29
SHR5YOL110W PGA3Q12746 312 aaKnown RBP16.89■□□□□ 0.29
SHR5YOL110W YLR278CQ05854 1341 aa16.89■□□□□ 0.29
SHR5YOL110W HPR1P17629 752 aaKnown RBP16.88■□□□□ 0.29
SHR5YOL110W IMP2'P32351 346 aa16.88■□□□□ 0.29
SHR5YOL110W RTS1P38903 757 aa16.88■□□□□ 0.29
SHR5YOL110W AIM9P40053 627 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms