RNA–Protein interactions for RNA: YNR057C

BIO4, Transcript of Dethiobiotin synthetase, yeast

Gene BIO4, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BIO4	YNR057C	AIM9	P40053	627 aa	Known RBP	13.17	□□□□□ -0.3
BIO4	YNR057C	YMR147W	P40218	223 aa	Known RBP	13.17	□□□□□ -0.3
BIO4	YNR057C	PRY3	P47033	881 aa		13.17	□□□□□ -0.3
BIO4	YNR057C	SPL2	P38839	148 aa		13.16	□□□□□ -0.3
BIO4	YNR057C	KRI1	P42846	591 aa	Known RBP	13.16	□□□□□ -0.3
BIO4	YNR057C	PFF1	P38244	976 aa		13.15	□□□□□ -0.3
BIO4	YNR057C	NPA3	P47122	385 aa		13.15	□□□□□ -0.3
BIO4	YNR057C	SAS4	Q04003	481 aa		13.15	□□□□□ -0.3
BIO4	YNR057C	NUG1	P40010	520 aa	Known RBP	13.14	□□□□□ -0.31
BIO4	YNR057C	RPT4	P53549	437 aa	Known RBP	13.14	□□□□□ -0.31
BIO4	YNR057C	VPS20	Q04272	221 aa		13.14	□□□□□ -0.31
BIO4	YNR057C	FAS2	P19097	1887 aa	Known RBP	13.14	□□□□□ -0.31
BIO4	YNR057C	LAM4	P38800	1345 aa		13.13	□□□□□ -0.31
BIO4	YNR057C	SIT4	P20604	311 aa		13.13	□□□□□ -0.31
BIO4	YNR057C	OPI1	P21957	404 aa		13.13	□□□□□ -0.31
BIO4	YNR057C	YIR042C	P40586	236 aa		13.13	□□□□□ -0.31
BIO4	YNR057C	BBC1	P47068	1157 aa		13.13	□□□□□ -0.31
BIO4	YNR057C	HKR1	P41809	1802 aa		13.12	□□□□□ -0.31
BIO4	YNR057C	TPM1	P17536	199 aa	Known RBP	13.12	□□□□□ -0.31
BIO4	YNR057C	CLC1	P17891	233 aa		13.12	□□□□□ -0.31
BIO4	YNR057C	SMY1	P32364	656 aa	Known RBP	13.12	□□□□□ -0.31
BIO4	YNR057C	KRE2	P27809	442 aa		13.11	□□□□□ -0.31
BIO4	YNR057C	CIC1	P38779	376 aa	Known RBP	13.11	□□□□□ -0.31
BIO4	YNR057C	SNF7	P39929	240 aa	Known RBP	13.11	□□□□□ -0.31
BIO4	YNR057C	PKH3	Q03306	898 aa	Predicted RBP	13.11	□□□□□ -0.31
BIO4	YNR057C	INM2	Q05533	292 aa		13.11	□□□□□ -0.31
BIO4	YNR057C	PGA3	Q12746	312 aa	Known RBP	13.11	□□□□□ -0.31
BIO4	YNR057C	SPO22	P40511	975 aa		13.1	□□□□□ -0.31
BIO4	YNR057C	IRC4	Q03036	179 aa		13.1	□□□□□ -0.31
BIO4	YNR057C	ERO1	Q03103	563 aa		13.1	□□□□□ -0.31
BIO4	YNR057C	KAR5	Q04746	504 aa		13.1	□□□□□ -0.31
BIO4	YNR057C	ROX1	P25042	368 aa		13.09	□□□□□ -0.31
BIO4	YNR057C	LCB1	P25045	558 aa	Known RBP	13.08	□□□□□ -0.32
BIO4	YNR057C	MSP1	P28737	362 aa		13.08	□□□□□ -0.32
BIO4	YNR057C	GRX7	P38068	203 aa		13.08	□□□□□ -0.32
BIO4	YNR057C	MSN5	P52918	1224 aa		13.08	□□□□□ -0.32
BIO4	YNR057C	TSR3	Q12094	313 aa	Known RBP	13.08	□□□□□ -0.32
BIO4	YNR057C	TAH18	Q12181	623 aa		13.08	□□□□□ -0.32
BIO4	YNR057C	ERT1	P38140	529 aa		13.07	□□□□□ -0.32
BIO4	YNR057C	IRC8	P47046	822 aa		13.07	□□□□□ -0.32
BIO4	YNR057C	ENP2	P48234	707 aa	Known RBP	13.07	□□□□□ -0.32
BIO4	YNR057C	RPT3	P33298	428 aa	Known RBP	13.06	□□□□□ -0.32
BIO4	YNR057C	YPR148C	Q06523	435 aa		13.06	□□□□□ -0.32
BIO4	YNR057C	MET1	P36150	593 aa		13.05	□□□□□ -0.32
BIO4	YNR057C	CYB2	P00175	591 aa		13.04	□□□□□ -0.32
BIO4	YNR057C	BIK1	P11709	440 aa		13.04	□□□□□ -0.32
BIO4	YNR057C	VID28	P40547	921 aa		13.04	□□□□□ -0.32
BIO4	YNR057C	YGL081W	P53156	320 aa		13.04	□□□□□ -0.32
BIO4	YNR057C	UBX2	Q04228	584 aa		13.04	□□□□□ -0.32
BIO4	YNR057C	PPM2	Q08282	695 aa		13.04	□□□□□ -0.32
BIO4	YNR057C	RPL19A	P0CX82	189 aa	Known RBP	13.03	□□□□□ -0.32
BIO4	YNR057C	RPL19B	P0CX83	189 aa	Predicted RBP	13.03	□□□□□ -0.32
BIO4	YNR057C	PEP3	P27801	918 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	IMP2'	P32351	346 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.03	□□□□□ -0.32	not detected
BIO4	YNR057C	YKL222C	P35995	705 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	PTK1	P36002	662 aa	Predicted RBP	13.03	□□□□□ -0.32
BIO4	YNR057C	SET4	P42948	560 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	EAF6	P47128	113 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	HRQ1	Q05549	1077 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	TOS4	Q06266	489 aa		13.03	□□□□□ -0.32
BIO4	YNR057C	SSF2	Q12153	453 aa	Predicted RBP	13.03	□□□□□ -0.32
BIO4	YNR057C	RET1	P22276	1149 aa	Known RBP	13.02	□□□□□ -0.33
BIO4	YNR057C	NPL4	P33755	580 aa		13.02	□□□□□ -0.33
BIO4	YNR057C	BDH2	P39713	417 aa		13.02	□□□□□ -0.33
BIO4	YNR057C	YFH7	P43591	353 aa		13.02	□□□□□ -0.33
BIO4	YNR057C	IOC3	P43596	787 aa		13.02	□□□□□ -0.33
BIO4	YNR057C	CTF18	P49956	741 aa		13.02	□□□□□ -0.33
BIO4	YNR057C	ARP5	P53946	755 aa		13.02	□□□□□ -0.33
BIO4	YNR057C	COQ1	P18900	473 aa		13.01	□□□□□ -0.33
BIO4	YNR057C	GEF1	P37020	779 aa		13.01	□□□□□ -0.33
BIO4	YNR057C	BOI1	P38041	980 aa	Known RBP	13.01	□□□□□ -0.33
BIO4	YNR057C	HST1	P53685	503 aa		13	□□□□□ -0.33
BIO4	YNR057C	HAP5	Q02516	242 aa		13	□□□□□ -0.33
BIO4	YNR057C	ESF1	Q06344	628 aa	Known RBP	13	□□□□□ -0.33
BIO4	YNR057C	GRX6	Q12438	231 aa		13	□□□□□ -0.33
BIO4	YNR057C	JJJ2	P46997	583 aa		12.99	□□□□□ -0.33
BIO4	YNR057C	KIN4	Q01919	800 aa		12.99	□□□□□ -0.33
BIO4	YNR057C	ECM23	Q02710	187 aa		12.99	□□□□□ -0.33
BIO4	YNR057C	PSF3	Q12146	194 aa		12.99	□□□□□ -0.33
BIO4	YNR057C	FLO1	P32768	1537 aa		12.98	□□□□□ -0.33
BIO4	YNR057C	FBP26	P32604	452 aa		12.98	□□□□□ -0.33
BIO4	YNR057C	MDL2	P33311	773 aa		12.98	□□□□□ -0.33
BIO4	YNR057C	CRG1	P38892	291 aa	RIP-Chip data	12.98	□□□□□ -0.33	not detected
BIO4	YNR057C	RRP8	P38961	392 aa	Known RBP	12.98	□□□□□ -0.33
BIO4	YNR057C	ENT3	P47160	408 aa		12.98	□□□□□ -0.33
BIO4	YNR057C	SPN1	Q06505	410 aa	Predicted RBP	12.98	□□□□□ -0.33
BIO4	YNR057C	WRS1	Q12109	432 aa	Known RBP	12.98	□□□□□ -0.33
BIO4	YNR057C	CHO2	P05374	869 aa	Known RBP	12.97	□□□□□ -0.33
BIO4	YNR057C	CTT1	P06115	562 aa		12.97	□□□□□ -0.33
BIO4	YNR057C	ARL1	P38116	183 aa	Known RBP	12.97	□□□□□ -0.33
BIO4	YNR057C	YKE2	P52553	114 aa		12.97	□□□□□ -0.33
BIO4	YNR057C	MATALPHA2	P0CY08	210 aa		12.96	□□□□□ -0.33
BIO4	YNR057C	HMLALPHA2	P0CY09	210 aa		12.96	□□□□□ -0.33
BIO4	YNR057C	SNF3	P10870	884 aa		12.96	□□□□□ -0.33
BIO4	YNR057C	PRX1	P34227	261 aa	Known RBP	12.96	□□□□□ -0.33
BIO4	YNR057C	RER2	P35196	286 aa		12.96	□□□□□ -0.33
BIO4	YNR057C	SLN1	P39928	1220 aa	Predicted RBP	12.96	□□□□□ -0.33
BIO4	YNR057C	GSM1	P42950	618 aa		12.96	□□□□□ -0.33
BIO4	YNR057C	CPA2	P03965	1118 aa	Known RBP	12.95	□□□□□ -0.34

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms