RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W SKP1P52286 194 aa7.01□□□□□ -1.29
CPR8YNR028W CUS1Q02554 436 aaPredicted RBP7.01□□□□□ -1.29
CPR8YNR028W HPF1Q05164 967 aa7.01□□□□□ -1.29
CPR8YNR028W APC11Q12157 165 aa7.01□□□□□ -1.29
CPR8YNR028W FPS1P23900 669 aa7□□□□□ -1.29
CPR8YNR028W QDR1P40475 563 aa7□□□□□ -1.29
CPR8YNR028W LYS5P50113 272 aa7□□□□□ -1.29
CPR8YNR028W SUT1P53032 299 aaKnown RBP7□□□□□ -1.29
CPR8YNR028W ATG1P53104 897 aa7□□□□□ -1.29
CPR8YNR028W YGR035CP53222 116 aa7□□□□□ -1.29
CPR8YNR028W SYT1Q06836 1226 aa7□□□□□ -1.29
CPR8YNR028W YDR461C-AQ2V2P7 80 aa7□□□□□ -1.29
CPR8YNR028W YBL113CQ7M4S9 792 aa7□□□□□ -1.29
CPR8YNR028W RPB10P22139 70 aa6.98□□□□□ -1.29
CPR8YNR028W ERP5P38819 212 aa6.98□□□□□ -1.29
CPR8YNR028W HXT8P40886 569 aa6.98□□□□□ -1.29
CPR8YNR028W GRS1P38088 690 aaKnown RBP6.97□□□□□ -1.29
CPR8YNR028W NCL1P38205 684 aaKnown RBP6.97□□□□□ -1.29
CPR8YNR028W APM2P38700 605 aa6.97□□□□□ -1.29
CPR8YNR028W FIR1P40020 876 aa6.97□□□□□ -1.29
CPR8YNR028W YOR296WQ08748 1289 aa6.97□□□□□ -1.29
CPR8YNR028W TRL1P09880 827 aaKnown RBP6.96□□□□□ -1.3
CPR8YNR028W MSN1P22148 382 aa6.96□□□□□ -1.3
CPR8YNR028W ISW1P38144 1129 aa6.96□□□□□ -1.3
CPR8YNR028W GIP1P38229 639 aa6.96□□□□□ -1.3
CPR8YNR028W SSF1P38789 453 aaPredicted RBP6.96□□□□□ -1.3
CPR8YNR028W ACF4P47129 309 aa6.96□□□□□ -1.3
CPR8YNR028W DPH6Q12429 685 aa6.96□□□□□ -1.3
CPR8YNR028W NAB2P32505 525 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
CPR8YNR028W KTR2P33550 425 aa6.95□□□□□ -1.3
CPR8YNR028W BSD2P38356 321 aa6.95□□□□□ -1.3
CPR8YNR028W JJJ3P47138 172 aa6.95□□□□□ -1.3
CPR8YNR028W MDJ2P42834 146 aa6.94□□□□□ -1.3
CPR8YNR028W YNR040WP53736 256 aa6.94□□□□□ -1.3
CPR8YNR028W HEH2Q03281 663 aa6.94□□□□□ -1.3
CPR8YNR028W SMC1P32908 1225 aa6.93□□□□□ -1.3
CPR8YNR028W YBR287WP38355 427 aa6.93□□□□□ -1.3
CPR8YNR028W MSC7P38694 644 aa6.92□□□□□ -1.3
CPR8YNR028W ITC1P53125 1264 aa6.92□□□□□ -1.3
CPR8YNR028W TY1A-DR2Q03964 440 aaKnown RBP6.92□□□□□ -1.3
CPR8YNR028W RAD55P38953 406 aa6.91□□□□□ -1.3
CPR8YNR028W UFD2P54860 961 aa6.91□□□□□ -1.3
CPR8YNR028W TRK2P28584 889 aa6.9□□□□□ -1.3
CPR8YNR028W NTA1P40354 457 aa6.9□□□□□ -1.3
CPR8YNR028W RGD2P43556 714 aa6.9□□□□□ -1.3
CPR8YNR028W YML020WQ03722 664 aa6.9□□□□□ -1.3
CPR8YNR028W TRS120Q04183 1289 aa6.89□□□□□ -1.31
CPR8YNR028W STM1P39015 273 aaKnown RBP6.88□□□□□ -1.31
CPR8YNR028W YIL165CP40446 119 aa6.88□□□□□ -1.31
CPR8YNR028W GPM1P00950 247 aaKnown RBP6.87□□□□□ -1.31
CPR8YNR028W IRS4P36115 615 aaKnown RBP6.87□□□□□ -1.31
CPR8YNR028W YHL050CP38721 697 aa6.87□□□□□ -1.31
CPR8YNR028W AIM46P38885 310 aa6.87□□□□□ -1.31
CPR8YNR028W YHR219WP38900 624 aa6.87□□□□□ -1.31
CPR8YNR028W YER156CP40093 338 aaKnown RBP6.87□□□□□ -1.31
CPR8YNR028W EMG1Q06287 252 aaKnown RBP6.87□□□□□ -1.31
CPR8YNR028W TIF6Q12522 245 aaKnown RBP6.87□□□□□ -1.31
CPR8YNR028W IDI1P15496 288 aa6.86□□□□□ -1.31
CPR8YNR028W SLD2P34252 453 aa6.86□□□□□ -1.31
CPR8YNR028W PSY2P40164 858 aa6.86□□□□□ -1.31
CPR8YNR028W PRK1P40494 810 aa6.86□□□□□ -1.31
CPR8YNR028W NUT2Q06213 157 aa6.86□□□□□ -1.31
CPR8YNR028W FRT1Q99332 602 aa6.86□□□□□ -1.31
CPR8YNR028W PDC5P16467 563 aaKnown RBP6.85□□□□□ -1.31
CPR8YNR028W KNS1P32350 737 aaPredicted RBP6.85□□□□□ -1.31
CPR8YNR028W RSC2Q06488 889 aa6.84□□□□□ -1.31
CPR8YNR028W PPT1P53043 513 aa6.83□□□□□ -1.32
CPR8YNR028W YNL011CP53980 444 aa6.83□□□□□ -1.32
CPR8YNR028W NOP8Q08287 484 aaPredicted RBP6.83□□□□□ -1.32
CPR8YNR028W MSC6Q08818 692 aaKnown RBP6.83□□□□□ -1.32
CPR8YNR028W MNL2Q12205 849 aa6.83□□□□□ -1.32
CPR8YNR028W AI1P03875 834 aa6.82□□□□□ -1.32
CPR8YNR028W RSC4Q02206 625 aa6.82□□□□□ -1.32
CPR8YNR028W SEC20P28791 383 aa6.81□□□□□ -1.32
CPR8YNR028W YJL181WP46987 611 aa6.81□□□□□ -1.32
CPR8YNR028W SEN54Q02825 467 aaPredicted RBP6.81□□□□□ -1.32
CPR8YNR028W MRP10O75012 95 aa6.8□□□□□ -1.32
CPR8YNR028W PPX1P38698 397 aa6.8□□□□□ -1.32
CPR8YNR028W CDC55Q00362 526 aa6.8□□□□□ -1.32
CPR8YNR028W IPL1P38991 367 aa6.79□□□□□ -1.32
CPR8YNR028W BSC2Q05611 235 aa6.79□□□□□ -1.32
CPR8YNR028W GPI13Q07830 1017 aa6.79□□□□□ -1.32
CPR8YNR028W THI12P42883 340 aa6.78□□□□□ -1.32
CPR8YNR028W THI5P43534 340 aa6.78□□□□□ -1.32
CPR8YNR028W THI11P47183 340 aa6.78□□□□□ -1.32
CPR8YNR028W THI13Q07748 340 aa6.78□□□□□ -1.32
CPR8YNR028W THI72Q08579 599 aa6.78□□□□□ -1.32
CPR8YNR028W PYC2P32327 1180 aaKnown RBP6.77□□□□□ -1.33
CPR8YNR028W MET1P36150 593 aa6.77□□□□□ -1.33
CPR8YNR028W INP51P40559 946 aaKnown RBP6.77□□□□□ -1.33
CPR8YNR028W YNR014WP53719 212 aa6.77□□□□□ -1.33
CPR8YNR028W RGA2Q06407 1009 aa6.77□□□□□ -1.33
CPR8YNR028W PGM2P37012 569 aaKnown RBP6.76□□□□□ -1.33
CPR8YNR028W ALG14P38242 237 aa6.76□□□□□ -1.33
CPR8YNR028W SBE2P42223 864 aaKnown RBP6.76□□□□□ -1.33
CPR8YNR028W WHI5Q12416 295 aa6.76□□□□□ -1.33
CPR8YNR028W FUS1P11710 512 aa6.75□□□□□ -1.33
CPR8YNR028W NAR1P23503 491 aaKnown RBP6.75□□□□□ -1.33
CPR8YNR028W ECM2P38241 364 aaKnown RBP6.75□□□□□ -1.33
CPR8YNR028W SAM37P50110 327 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms